RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 ITPR2Q14571 2701 aa0.1□□□□□ -2.39
TRAPPC8-203ENST00000577474 WDR87Q6ZQQ6 2873 aa0.1□□□□□ -2.39
TRAPPC8-203ENST00000577474 CFAP47Q6ZTR5 3102 aa0.1□□□□□ -2.39
TRAPPC8-203ENST00000577474 CCDC168Q8NDH2 2452 aa0.1□□□□□ -2.39
TRAPPC8-203ENST00000577474 UTP20O75691 2785 aaKnown RBP0.1□□□□□ -2.39
TRAPPC8-203ENST00000577474 EP400Q96L91 3159 aa0.1□□□□□ -2.39
TRAPPC8-203ENST00000577474 CEP350Q5VT06 3117 aa0.09□□□□□ -2.39
TRAPPC8-203ENST00000577474 LTN1O94822 1766 aa0.09□□□□□ -2.39
TRAPPC8-203ENST00000577474 NIPBLQ6KC79 2804 aaeCLIP0.09□□□□□ -2.39
TRAPPC8-203ENST00000577474 C3orf79P0CE67 100 aa0.09□□□□□ -2.4
TRAPPC8-203ENST00000577474 DEFB135Q30KP9 77 aa0.09□□□□□ -2.4
TRAPPC8-203ENST00000577474 LELP1Q5T871 98 aa0.09□□□□□ -2.4
TRAPPC8-203ENST00000577474 ACANP16112 2415 aa0.09□□□□□ -2.4
TRAPPC8-203ENST00000577474 EPG5Q9HCE0 2579 aa0.09□□□□□ -2.4
TRAPPC8-203ENST00000577474 LRBAP50851 2863 aa0.09□□□□□ -2.4
TRAPPC8-203ENST00000577474 LAMA1P25391 3075 aa0.09□□□□□ -2.4
TRAPPC8-203ENST00000577474 MUC12Q9UKN1 5478 aa0.09□□□□□ -2.4
TRAPPC8-203ENST00000577474 MUC3AQ02505 3323 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 FLNBO75369 2602 aaKnown RBP0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 ALMS1Q8TCU4 4167 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 ACACBO00763 2458 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 EYSQ5T1H1 3165 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 NDUFA3O95167 84 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 IFI6P09912 130 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 SPRR2BP35325 72 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 TEX15Q9BXT5 2789 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 CEP295Q9C0D2 2601 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 CRYBG3Q68DQ2 2970 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 NBEAL1Q6ZS30 2694 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 MGAM2Q2M2H8 2515 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 FAT3Q8TDW7 4589 aa0.08□□□□□ -2.4
TRAPPC8-203ENST00000577474 DNHD1Q96M86 4753 aa0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 MKI67P46013 3256 aaKnown RBP0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 BIRC6Q9NR09 4857 aa0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 CENPFP49454 3210 aa0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 MYO9AB2RTY4 2548 aa0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 PIK3C2BO00750 1634 aa0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 LCE6AA0A183 80 aa0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 SMIM13P0DJ93 91 aa0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 C18orf32Q8TCD1 76 aa0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 FREM2Q5SZK8 3169 aa0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 MAP1AP78559 2803 aaPredicted RBP0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 TIAM2Q8IVF5 1701 aa0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 PDE4DIPQ5VU43 2346 aa0.07□□□□□ -2.4
TRAPPC8-203ENST00000577474 DIP2BQ9P265 1576 aa0.06□□□□□ -2.4
TRAPPC8-203ENST00000577474 CSMD1Q96PZ7 3565 aa0.06□□□□□ -2.4
TRAPPC8-203ENST00000577474 SZT2Q5T011 3432 aa0.06□□□□□ -2.4
TRAPPC8-203ENST00000577474 LOC400499M0QZD8 3231 aa0.06□□□□□ -2.4
TRAPPC8-203ENST00000577474 MGAQ8IWI9 3026 aa0.06□□□□□ -2.4
TRAPPC8-203ENST00000577474 DMXL2Q8TDJ6 3036 aa0.06□□□□□ -2.4
TRAPPC8-203ENST00000577474 C5orf42Q9H799 3197 aa0.06□□□□□ -2.4
TRAPPC8-203ENST00000577474 POLR1AO95602 1720 aaPredicted RBP0.06□□□□□ -2.4
TRAPPC8-203ENST00000577474 HERC2O95714 4834 aa0.06□□□□□ -2.4
TRAPPC8-203ENST00000577474 CFAP54Q96N23 3096 aa0.06□□□□□ -2.4
TRAPPC8-203ENST00000577474 VCANP13611 3396 aa0.06□□□□□ -2.4
TRAPPC8-203ENST00000577474 NF1P21359 2839 aa0.05□□□□□ -2.4
TRAPPC8-203ENST00000577474 DNAH12Q6ZR08 3092 aa0.05□□□□□ -2.4
TRAPPC8-203ENST00000577474 ANKARQ7Z5J8 1434 aa0.05□□□□□ -2.4
TRAPPC8-203ENST00000577474 RRBP1Q9P2E9 1410 aaKnown RBP0.05□□□□□ -2.4
TRAPPC8-203ENST00000577474 SRRM2Q9UQ35 2752 aaKnown RBP0.05□□□□□ -2.4
TRAPPC8-203ENST00000577474 NREPQ16612 68 aa0.05□□□□□ -2.4
TRAPPC8-203ENST00000577474 NWD1Q149M9 1564 aa0.05□□□□□ -2.4
TRAPPC8-203ENST00000577474 CFAP74Q9C0B2 1584 aa0.05□□□□□ -2.4
TRAPPC8-203ENST00000577474 CENPEQ02224 2701 aa0.05□□□□□ -2.4
TRAPPC8-203ENST00000577474 TACC2O95359 2948 aa0.04□□□□□ -2.4
TRAPPC8-203ENST00000577474 ZFHX4Q86UP3 3567 aa0.04□□□□□ -2.4
TRAPPC8-203ENST00000577474 TLN1Q9Y490 2541 aaKnown RBP0.04□□□□□ -2.4
TRAPPC8-203ENST00000577474 TLN2Q9Y4G6 2542 aa0.04□□□□□ -2.4
TRAPPC8-203ENST00000577474 PRO3102Q9H379 93 aa0.04□□□□□ -2.4
TRAPPC8-203ENST00000577474 CHD7Q9P2D1 2997 aa0.03□□□□□ -2.4
TRAPPC8-203ENST00000577474 PCNX1Q96RV3 2341 aa0.03□□□□□ -2.4
TRAPPC8-203ENST00000577474 VPS13AQ96RL7 3174 aa0.03□□□□□ -2.4
TRAPPC8-203ENST00000577474 HSPG2P98160 4391 aa0.03□□□□□ -2.41
TRAPPC8-203ENST00000577474 RANBP2P49792 3224 aaKnown RBP0.02□□□□□ -2.41
TRAPPC8-203ENST00000577474 ZZEF1O43149 2961 aa0.02□□□□□ -2.41
TRAPPC8-203ENST00000577474 DMXL1Q9Y485 3027 aa0.02□□□□□ -2.41
TRAPPC8-203ENST00000577474 DCHS2Q6V1P9 2916 aa0.02□□□□□ -2.41
TRAPPC8-203ENST00000577474 FRYQ5TBA9 3013 aa0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 TRIOO75962 3097 aa0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 GOLGB1Q14789 3259 aaKnown RBP0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 RELNP78509 3460 aa0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 SPG11Q96JI7 2443 aa0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 NDUFA4O00483 81 aa0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 PRKDCP78527 4128 aaKnown RBP0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 ANKRD50Q9ULJ7 1429 aa0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 ADGRG4Q8IZF6 3080 aa0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 TNRC6CQ9HCJ0 1690 aaKnown RBP0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 CSMD2Q7Z408 3487 aa0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 ASPMQ8IZT6 3477 aa0.01□□□□□ -2.41
TRAPPC8-203ENST00000577474 FRYLO94915 3013 aa0□□□□□ -2.41
TRAPPC8-203ENST00000577474 MYO15AQ9UKN7 3530 aa0□□□□□ -2.41
TRAPPC8-203ENST00000577474 CUBNO60494 3623 aa0□□□□□ -2.41
TRAPPC8-203ENST00000577474 LAMA5O15230 3695 aa0□□□□□ -2.41
TRAPPC8-203ENST00000577474 HTTP42858 3142 aa0□□□□□ -2.41
TRAPPC8-203ENST00000577474 ATMQ13315 3056 aa0□□□□□ -2.41
TRAPPC8-203ENST00000577474 PRUNE2Q8WUY3 3088 aa0□□□□□ -2.41
TRAPPC8-203ENST00000577474 PTPN23Q9H3S7 1636 aa0□□□□□ -2.41
TRAPPC8-203ENST00000577474 STARD9Q9P2P6 4700 aa0□□□□□ -2.41
TRAPPC8-203ENST00000577474 SVEP1Q4LDE5 3571 aa-0□□□□□ -2.41
TRAPPC8-203ENST00000577474 LRP2P98164 4655 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms