RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 KRTAP24-1Q3LI83 254 aa6.43□□□□□ -1.38
USP6-206ENST00000575709 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
USP6-206ENST00000575709 LINC00472Q9H8W2 130 aa6.39□□□□□ -1.39
USP6-206ENST00000575709 K7EIL1 84 aa6.38□□□□□ -1.39
USP6-206ENST00000575709 DMBT1Q9UGM3 2413 aaPredicted RBP6.38□□□□□ -1.39
USP6-206ENST00000575709 A8MU10 97 aa6.37□□□□□ -1.39
USP6-206ENST00000575709 EPG5Q9HCE0 2579 aa6.37□□□□□ -1.39
USP6-206ENST00000575709 DNAH12Q6ZR08 3092 aa6.36□□□□□ -1.39
USP6-206ENST00000575709 CEP295Q9C0D2 2601 aa6.35□□□□□ -1.39
USP6-206ENST00000575709 KRTAP26-1Q6PEX3 210 aa6.32□□□□□ -1.4
USP6-206ENST00000575709 PANO1I0J062 215 aa6.32□□□□□ -1.4
USP6-206ENST00000575709 C10orf142B7Z368 130 aa6.31□□□□□ -1.4
USP6-206ENST00000575709 Q6ZR54 194 aa6.31□□□□□ -1.4
USP6-206ENST00000575709 UTRNP46939 3433 aa6.3□□□□□ -1.4
USP6-206ENST00000575709 A8MUU9 505 aa6.3□□□□□ -1.4
USP6-206ENST00000575709 CEP350Q5VT06 3117 aa6.26□□□□□ -1.41
USP6-206ENST00000575709 C5orf42Q9H799 3197 aa6.25□□□□□ -1.41
USP6-206ENST00000575709 CFAP46Q8IYW2 2715 aa6.22□□□□□ -1.41
USP6-206ENST00000575709 KRTAP10-3P60369 221 aa6.22□□□□□ -1.41
USP6-206ENST00000575709 SPRR1AP35321 89 aa6.21□□□□□ -1.42
USP6-206ENST00000575709 HECTD1Q9ULT8 2610 aa6.2□□□□□ -1.42
USP6-206ENST00000575709 MGAM2Q2M2H8 2515 aa6.19□□□□□ -1.42
USP6-206ENST00000575709 PLAC8Q9NZF1 115 aa6.18□□□□□ -1.42
USP6-206ENST00000575709 AKAP13Q12802 2813 aa6.18□□□□□ -1.42
USP6-206ENST00000575709 Q5VSD8 79 aa6.17□□□□□ -1.42
USP6-206ENST00000575709 KRTAP4-16G5E9R7 235 aaPredicted RBP6.16□□□□□ -1.42
USP6-206ENST00000575709 KRTAP11-1Q8IUC1 163 aa6.15□□□□□ -1.42
USP6-206ENST00000575709 TNP1P09430 55 aa6.15□□□□□ -1.43
USP6-206ENST00000575709 FLNBO75369 2602 aaKnown RBP6.15□□□□□ -1.43
USP6-206ENST00000575709 MAST4O15021 2626 aa6.14□□□□□ -1.43
USP6-206ENST00000575709 SPRR1BP22528 89 aa6.14□□□□□ -1.43
USP6-206ENST00000575709 CENPEQ02224 2701 aa6.13□□□□□ -1.43
USP6-206ENST00000575709 KRTAP29-1A8MX34 341 aaPredicted RBP6.12□□□□□ -1.43
USP6-206ENST00000575709 ITPR3Q14573 2671 aa6.11□□□□□ -1.43
USP6-206ENST00000575709 FLNAP21333 2647 aaKnown RBP6.11□□□□□ -1.43
USP6-206ENST00000575709 ATRQ13535 2644 aa6.11□□□□□ -1.43
USP6-206ENST00000575709 NBEAL1Q6ZS30 2694 aa6.1□□□□□ -1.43
USP6-206ENST00000575709 HELZ2Q9BYK8 2649 aaKnown RBP6.09□□□□□ -1.43
USP6-206ENST00000575709 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
USP6-206ENST00000575709 PCNTO95613 3336 aa6.07□□□□□ -1.44
USP6-206ENST00000575709 A0A087X002 238 aa6.06□□□□□ -1.44
USP6-206ENST00000575709 NOTCH2NLQ7Z3S9 236 aa6.06□□□□□ -1.44
USP6-206ENST00000575709 STAB1Q9NY15 2570 aa6.03□□□□□ -1.44
USP6-206ENST00000575709 STAB2Q8WWQ8 2551 aa6.01□□□□□ -1.45
USP6-206ENST00000575709 TEX15Q9BXT5 2789 aa6.01□□□□□ -1.45
USP6-206ENST00000575709 CFAP54Q96N23 3096 aa5.98□□□□□ -1.45
USP6-206ENST00000575709 XIRP2A4UGR9 3374 aa5.98□□□□□ -1.45
USP6-206ENST00000575709 P0C880 135 aa5.98□□□□□ -1.45
USP6-206ENST00000575709 NOTCH1P46531 2555 aa5.96□□□□□ -1.45
USP6-206ENST00000575709 KRTAP10-8P60410 259 aa5.95□□□□□ -1.46
USP6-206ENST00000575709 CHD6Q8TD26 2715 aa5.94□□□□□ -1.46
USP6-206ENST00000575709 KMT2BQ9UMN6 2715 aaPredicted RBP5.94□□□□□ -1.46
USP6-206ENST00000575709 LCE6AA0A183 80 aa5.94□□□□□ -1.46
USP6-206ENST00000575709 LAMA2P24043 3122 aaKnown RBP5.92□□□□□ -1.46
USP6-206ENST00000575709 KRTAP10-1P60331 282 aa5.89□□□□□ -1.47
USP6-206ENST00000575709 UNC79Q9P2D8 2635 aa5.88□□□□□ -1.47
USP6-206ENST00000575709 FREM2Q5SZK8 3169 aa5.87□□□□□ -1.47
USP6-206ENST00000575709 KRTAP1-5Q9BYS1 174 aa5.87□□□□□ -1.47
USP6-206ENST00000575709 COL6A5A8TX70 2615 aa5.87□□□□□ -1.47
USP6-206ENST00000575709 REV3LO60673 3130 aa5.86□□□□□ -1.47
USP6-206ENST00000575709 A0A0C4DFX4 3053 aa5.86□□□□□ -1.47
USP6-206ENST00000575709 KRTAP10-2P60368 255 aa5.85□□□□□ -1.47
USP6-206ENST00000575709 MKI67P46013 3256 aaKnown RBP5.84□□□□□ -1.47
USP6-206ENST00000575709 H0YAA0 97 aa5.83□□□□□ -1.48
USP6-206ENST00000575709 ITPR2Q14571 2701 aa5.83□□□□□ -1.48
USP6-206ENST00000575709 KRTAP1-3Q8IUG1 177 aa5.82□□□□□ -1.48
USP6-206ENST00000575709 TEP1Q99973 2627 aaKnown RBP5.8□□□□□ -1.48
USP6-206ENST00000575709 SETXQ7Z333 2677 aaKnown RBP5.79□□□□□ -1.48
USP6-206ENST00000575709 NSD1Q96L73 2696 aaPredicted RBP5.79□□□□□ -1.48
USP6-206ENST00000575709 BAHCC1Q9P281 2608 aa5.78□□□□□ -1.48
USP6-206ENST00000575709 KRTAP1-1Q07627 177 aa5.76□□□□□ -1.49
USP6-206ENST00000575709 CELSR3Q9NYQ7 3312 aa5.76□□□□□ -1.49
USP6-206ENST00000575709 GCN1Q92616 2671 aaKnown RBP5.74□□□□□ -1.49
USP6-206ENST00000575709 MGAQ8IWI9 3026 aa5.73□□□□□ -1.49
USP6-206ENST00000575709 PRUNE2Q8WUY3 3088 aa5.72□□□□□ -1.49
USP6-206ENST00000575709 RPS29P62273 56 aaKnown RBP5.72□□□□□ -1.49
USP6-206ENST00000575709 TRIOO75962 3097 aa5.71□□□□□ -1.5
USP6-206ENST00000575709 MAP1AP78559 2803 aaPredicted RBP5.7□□□□□ -1.5
USP6-206ENST00000575709 APCP25054 2843 aa5.69□□□□□ -1.5
USP6-206ENST00000575709 DSPP15924 2871 aaKnown RBP5.69□□□□□ -1.5
USP6-206ENST00000575709 WDFY4Q6ZS81 3184 aa5.68□□□□□ -1.5
USP6-206ENST00000575709 VPS13AQ96RL7 3174 aa5.68□□□□□ -1.5
USP6-206ENST00000575709 RANBP2P49792 3224 aaKnown RBP5.67□□□□□ -1.5
USP6-206ENST00000575709 CHD7Q9P2D1 2997 aa5.66□□□□□ -1.5
USP6-206ENST00000575709 Q6ZRN7 208 aaPredicted RBP5.66□□□□□ -1.5
USP6-206ENST00000575709 CRYBG3Q68DQ2 2970 aa5.66□□□□□ -1.5
USP6-206ENST00000575709 ZNF292O60281 2723 aa5.65□□□□□ -1.5
USP6-206ENST00000575709 LAMA3Q16787 3333 aa5.65□□□□□ -1.51
USP6-206ENST00000575709 A0A1B0GVY2 172 aa5.63□□□□□ -1.51
USP6-206ENST00000575709 IGSF10Q6WRI0 2623 aa5.63□□□□□ -1.51
USP6-206ENST00000575709 BRCA2P51587 3418 aa5.63□□□□□ -1.51
USP6-206ENST00000575709 FRYQ5TBA9 3013 aa5.63□□□□□ -1.51
USP6-206ENST00000575709 KRTAP13-2Q52LG2 175 aa5.62□□□□□ -1.51
USP6-206ENST00000575709 DNAH14Q0VDD8 3507 aa5.62□□□□□ -1.51
USP6-206ENST00000575709 NBEAL2Q6ZNJ1 2754 aa5.6□□□□□ -1.51
USP6-206ENST00000575709 UBR5O95071 2799 aaPredicted RBP5.57□□□□□ -1.52
USP6-206ENST00000575709 USP34Q70CQ2 3546 aa5.55□□□□□ -1.52
USP6-206ENST00000575709 CDH23Q9H251 3354 aa5.55□□□□□ -1.52
USP6-206ENST00000575709 KRTAP7-1Q8IUC3 87 aa5.55□□□□□ -1.52
USP6-206ENST00000575709 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms