RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 C4orf48Q5BLP8 95 aa6.44□□□□□ -1.38
CHD3-216ENST00000573936 SPAG11AQ6PDA7 123 aa6.44□□□□□ -1.38
CHD3-216ENST00000573936 LINC00575Q6W349 94 aa6.44□□□□□ -1.38
CHD3-216ENST00000573936 LAMTOR3Q9UHA4 124 aa6.44□□□□□ -1.38
CHD3-216ENST00000573936 IGLV9-49A0A0B4J1Y8 123 aa6.43□□□□□ -1.38
CHD3-216ENST00000573936 TEX49A0A1B0GTD5 131 aa6.43□□□□□ -1.38
CHD3-216ENST00000573936 hADV29S1A0JD25 119 aa6.43□□□□□ -1.38
CHD3-216ENST00000573936 SNCGO76070 127 aa6.43□□□□□ -1.38
CHD3-216ENST00000573936 COX6CP09669 75 aa6.43□□□□□ -1.38
CHD3-216ENST00000573936 CLEC2BQ92478 149 aa6.43□□□□□ -1.38
CHD3-216ENST00000573936 FAM218AQ96MZ4 157 aa6.43□□□□□ -1.38
CHD3-216ENST00000573936 SCGB1C2P0DMR2 95 aa6.42□□□□□ -1.38
CHD3-216ENST00000573936 DEFB105AQ8NG35 78 aa6.42□□□□□ -1.38
CHD3-216ENST00000573936 A0A1W2PPM0 123 aa6.41□□□□□ -1.38
CHD3-216ENST00000573936 MOBPQ13875 183 aa6.41□□□□□ -1.38
CHD3-216ENST00000573936 C9orf153Q5TBE3 101 aa6.41□□□□□ -1.38
CHD3-216ENST00000573936 Q8NBF4 154 aa6.41□□□□□ -1.38
CHD3-216ENST00000573936 IGLV5-48A0A075B6I7 105 aa6.4□□□□□ -1.38
CHD3-216ENST00000573936 KRTAP9-6A0A140TA67 174 aa6.4□□□□□ -1.38
CHD3-216ENST00000573936 A0A1B0GX51 115 aa6.38□□□□□ -1.39
CHD3-216ENST00000573936 LST1O00453 97 aa6.38□□□□□ -1.39
CHD3-216ENST00000573936 TCL1BO95988 128 aa6.38□□□□□ -1.39
CHD3-216ENST00000573936 SPINK1P00995 79 aa6.38□□□□□ -1.39
CHD3-216ENST00000573936 FABP2P12104 132 aa6.38□□□□□ -1.39
CHD3-216ENST00000573936 LINC01547P58512 204 aaPredicted RBP6.38□□□□□ -1.39
CHD3-216ENST00000573936 LYRM7Q5U5X0 104 aa6.38□□□□□ -1.39
CHD3-216ENST00000573936 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.38□□□□□ -1.39
CHD3-216ENST00000573936 Q6ZQY7 126 aa6.37□□□□□ -1.39
CHD3-216ENST00000573936 Q8N377 158 aa6.37□□□□□ -1.39
CHD3-216ENST00000573936 A0A0U1RQV1 116 aa6.36□□□□□ -1.39
CHD3-216ENST00000573936 TRACP01848 142 aa6.36□□□□□ -1.39
CHD3-216ENST00000573936 OCIAD2Q56VL3 154 aa6.36□□□□□ -1.39
CHD3-216ENST00000573936 PPDPFLQ8WWR9 84 aa6.36□□□□□ -1.39
CHD3-216ENST00000573936 TRBV20-1A0A075B6N2 111 aa6.35□□□□□ -1.39
CHD3-216ENST00000573936 GHRHP01286 108 aa6.35□□□□□ -1.39
CHD3-216ENST00000573936 RPS29P62273 56 aaKnown RBP6.35□□□□□ -1.39
CHD3-216ENST00000573936 ATXN8Q156A1 80 aa6.35□□□□□ -1.39
CHD3-216ENST00000573936 PRR4Q16378 134 aa6.35□□□□□ -1.39
CHD3-216ENST00000573936 SMIM29Q86T20 159 aa6.35□□□□□ -1.39
CHD3-216ENST00000573936 SPCS1Q9Y6A9 102 aa6.35□□□□□ -1.39
CHD3-216ENST00000573936 MUC2Q02817 5179 aa6.34□□□□□ -1.39
CHD3-216ENST00000573936 F8WEM9 126 aa6.34□□□□□ -1.39
CHD3-216ENST00000573936 DNAL4O96015 105 aa6.34□□□□□ -1.39
CHD3-216ENST00000573936 K7EP34 96 aa6.32□□□□□ -1.4
CHD3-216ENST00000573936 H3BMG7 143 aa6.31□□□□□ -1.4
CHD3-216ENST00000573936 H3BQ85 93 aa6.31□□□□□ -1.4
CHD3-216ENST00000573936 CD164Q04900 197 aa6.31□□□□□ -1.4
CHD3-216ENST00000573936 ORMDL1Q9P0S3 153 aa6.31□□□□□ -1.4
CHD3-216ENST00000573936 LIMD2Q9BT23 127 aa6.3□□□□□ -1.4
CHD3-216ENST00000573936 A0A1B0GV90 55 aa6.29□□□□□ -1.4
CHD3-216ENST00000573936 C9JAW5 83 aa6.29□□□□□ -1.4
CHD3-216ENST00000573936 Q6JHZ5 121 aa6.29□□□□□ -1.4
CHD3-216ENST00000573936 FP248Q71RG6 208 aaPredicted RBP6.29□□□□□ -1.4
CHD3-216ENST00000573936 IGLV8-61A0A075B6I0 122 aa6.28□□□□□ -1.4
CHD3-216ENST00000573936 BAALC-AS2P0C853 105 aa6.28□□□□□ -1.4
CHD3-216ENST00000573936 HRCT1Q6UXD1 115 aa6.28□□□□□ -1.4
CHD3-216ENST00000573936 GTF2H5Q6ZYL4 71 aa6.28□□□□□ -1.4
CHD3-216ENST00000573936 MTURNQ8N3F0 131 aa6.28□□□□□ -1.4
CHD3-216ENST00000573936 RETNLBQ9BQ08 111 aa6.28□□□□□ -1.4
CHD3-216ENST00000573936 IGLV7-46A0A075B6I9 117 aa6.26□□□□□ -1.41
CHD3-216ENST00000573936 TMEM256-PLSCR3K7ERE1 68 aa6.26□□□□□ -1.41
CHD3-216ENST00000573936 H3BT86 120 aa6.25□□□□□ -1.41
CHD3-216ENST00000573936 NDUFV3P56181 108 aaKnown RBP6.25□□□□□ -1.41
CHD3-216ENST00000573936 PRO0461Q9UI25 63 aa6.25□□□□□ -1.41
CHD3-216ENST00000573936 SMCPP49901 116 aaPredicted RBP6.24□□□□□ -1.41
CHD3-216ENST00000573936 UBE2V1Q13404 147 aa6.24□□□□□ -1.41
CHD3-216ENST00000573936 Q5XG85 94 aa6.24□□□□□ -1.41
CHD3-216ENST00000573936 FAT4Q6V0I7 4981 aa6.23□□□□□ -1.41
CHD3-216ENST00000573936 IGFL1Q6UW32 110 aa6.23□□□□□ -1.41
CHD3-216ENST00000573936 ANKRD29Q8N6D5 301 aa6.23□□□□□ -1.41
CHD3-216ENST00000573936 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
CHD3-216ENST00000573936 A0A0G2JQZ4 141 aa6.21□□□□□ -1.42
CHD3-216ENST00000573936 A0A1B0GV72 72 aa6.21□□□□□ -1.42
CHD3-216ENST00000573936 TRBV7-7A0A0K0K1E9 115 aa6.19□□□□□ -1.42
CHD3-216ENST00000573936 F8W1H4 67 aa6.19□□□□□ -1.42
CHD3-216ENST00000573936 Q6Q795 121 aa6.19□□□□□ -1.42
CHD3-216ENST00000573936 CDIP1Q9H305 208 aa6.19□□□□□ -1.42
CHD3-216ENST00000573936 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
CHD3-216ENST00000573936 TEN1Q86WV5 123 aa6.18□□□□□ -1.42
CHD3-216ENST00000573936 OBSCN-AS1Q96MR7 158 aa6.18□□□□□ -1.42
CHD3-216ENST00000573936 RBM3P98179 157 aaKnown RBP6.17□□□□□ -1.42
CHD3-216ENST00000573936 ASB16-AS1Q495Z4 193 aa6.17□□□□□ -1.42
CHD3-216ENST00000573936 JMJD7-PLA2G4BH0Y9G9 81 aa6.16□□□□□ -1.42
CHD3-216ENST00000573936 MUC17Q685J3 4493 aa6.15□□□□□ -1.42
CHD3-216ENST00000573936 TRBV7-4A0A0J9YYF1 115 aa6.15□□□□□ -1.42
CHD3-216ENST00000573936 KRTAP13-3Q3SY46 172 aa6.15□□□□□ -1.42
CHD3-216ENST00000573936 C1orf195Q5TG92 126 aa6.15□□□□□ -1.42
CHD3-216ENST00000573936 SS18L2Q9UHA2 77 aa6.15□□□□□ -1.42
CHD3-216ENST00000573936 C14orf132Q9NPU4 83 aa6.14□□□□□ -1.43
CHD3-216ENST00000573936 LOC110117498A0A087WWA1 95 aa6.13□□□□□ -1.43
CHD3-216ENST00000573936 ETDBQ3ZM63 59 aa6.13□□□□□ -1.43
CHD3-216ENST00000573936 DSCR8Q96T75 97 aa6.13□□□□□ -1.43
CHD3-216ENST00000573936 A0A1W2PNM2 257 aa6.12□□□□□ -1.43
CHD3-216ENST00000573936 Q6ZQT0 140 aa6.12□□□□□ -1.43
CHD3-216ENST00000573936 CCKP06307 115 aa6.11□□□□□ -1.43
CHD3-216ENST00000573936 A0A087WSZ3 146 aa6.1□□□□□ -1.43
CHD3-216ENST00000573936 PDE6GP18545 87 aa6.09□□□□□ -1.43
CHD3-216ENST00000573936 VPS25Q9BRG1 176 aa6.09□□□□□ -1.43
CHD3-216ENST00000573936 C21orf62-AS1Q17RA5 79 aa6.08□□□□□ -1.44
CHD3-216ENST00000573936 C9orf92A6NGG3 77 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms