RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 FAM218AQ96MZ4 157 aa9.95□□□□□ -0.82
LITAF-212ENST00000573332 PPDPFLQ8WWR9 84 aa9.94□□□□□ -0.82
LITAF-212ENST00000573332 OCIAD2Q56VL3 154 aa9.93□□□□□ -0.82
LITAF-212ENST00000573332 COX6CP09669 75 aa9.92□□□□□ -0.82
LITAF-212ENST00000573332 PSMB2P49721 201 aa9.92□□□□□ -0.82
LITAF-212ENST00000573332 RPS29P62273 56 aaKnown RBP9.92□□□□□ -0.82
LITAF-212ENST00000573332 GHRHP01286 108 aa9.87□□□□□ -0.83
LITAF-212ENST00000573332 CLEC2BQ92478 149 aa9.87□□□□□ -0.83
LITAF-212ENST00000573332 IGLV8-61A0A075B6I0 122 aa9.86□□□□□ -0.83
LITAF-212ENST00000573332 F8WEM9 126 aa9.86□□□□□ -0.83
LITAF-212ENST00000573332 CD164Q04900 197 aa9.86□□□□□ -0.83
LITAF-212ENST00000573332 PRR4Q16378 134 aa9.84□□□□□ -0.83
LITAF-212ENST00000573332 SNHG12Q9BXW3 62 aa9.84□□□□□ -0.83
LITAF-212ENST00000573332 SCGB1C2P0DMR2 95 aa9.82□□□□□ -0.84
LITAF-212ENST00000573332 Q6JHZ5 121 aa9.82□□□□□ -0.84
LITAF-212ENST00000573332 RETNLBQ9BQ08 111 aa9.82□□□□□ -0.84
LITAF-212ENST00000573332 H3BQ85 93 aa9.81□□□□□ -0.84
LITAF-212ENST00000573332 DNAL4O96015 105 aa9.81□□□□□ -0.84
LITAF-212ENST00000573332 TRACP01848 142 aa9.81□□□□□ -0.84
LITAF-212ENST00000573332 LST1O00453 97 aa9.8□□□□□ -0.84
LITAF-212ENST00000573332 NDUFV3P56181 108 aaKnown RBP9.79□□□□□ -0.84
LITAF-212ENST00000573332 BATFQ16520 125 aa9.79□□□□□ -0.84
LITAF-212ENST00000573332 FP248Q71RG6 208 aaPredicted RBP9.79□□□□□ -0.84
LITAF-212ENST00000573332 ORMDL1Q9P0S3 153 aa9.79□□□□□ -0.84
LITAF-212ENST00000573332 Q5XG85 94 aa9.78□□□□□ -0.84
LITAF-212ENST00000573332 HRCT1Q6UXD1 115 aa9.78□□□□□ -0.84
LITAF-212ENST00000573332 LIMD2Q9BT23 127 aa9.78□□□□□ -0.84
LITAF-212ENST00000573332 A0A0G2JQZ4 141 aa9.77□□□□□ -0.85
LITAF-212ENST00000573332 TMEM256-PLSCR3K7ERE1 68 aa9.76□□□□□ -0.85
LITAF-212ENST00000573332 FABP2P12104 132 aa9.76□□□□□ -0.85
LITAF-212ENST00000573332 IGFL1Q6UW32 110 aa9.76□□□□□ -0.85
LITAF-212ENST00000573332 IGLV7-46A0A075B6I9 117 aa9.75□□□□□ -0.85
LITAF-212ENST00000573332 NAA38Q9BRA0 125 aaKnown RBP9.74□□□□□ -0.85
LITAF-212ENST00000573332 H3BUT2 72 aa9.73□□□□□ -0.85
LITAF-212ENST00000573332 LRP2P98164 4655 aa9.73□□□□□ -0.85
LITAF-212ENST00000573332 H3BMG7 143 aa9.72□□□□□ -0.85
LITAF-212ENST00000573332 TPRXLQ17RH7 258 aa9.72□□□□□ -0.85
LITAF-212ENST00000573332 LYRM7Q5U5X0 104 aa9.72□□□□□ -0.85
LITAF-212ENST00000573332 TCL1BO95988 128 aa9.71□□□□□ -0.86
LITAF-212ENST00000573332 UBE2V1Q13404 147 aa9.71□□□□□ -0.86
LITAF-212ENST00000573332 ATXN8Q156A1 80 aa9.71□□□□□ -0.86
LITAF-212ENST00000573332 C9orf118A6NHY6 69 aa9.7□□□□□ -0.86
LITAF-212ENST00000573332 TAX1BP3O14907 124 aa9.7□□□□□ -0.86
LITAF-212ENST00000573332 Q6Q795 121 aa9.69□□□□□ -0.86
LITAF-212ENST00000573332 TRBV20-1A0A075B6N2 111 aa9.68□□□□□ -0.86
LITAF-212ENST00000573332 TRBV7-7A0A0K0K1E9 115 aa9.68□□□□□ -0.86
LITAF-212ENST00000573332 LPAP08519 4548 aa9.68□□□□□ -0.86
LITAF-212ENST00000573332 BAALC-AS2P0C853 105 aa9.66□□□□□ -0.86
LITAF-212ENST00000573332 TEN1Q86WV5 123 aa9.66□□□□□ -0.86
LITAF-212ENST00000573332 ASB16-AS1Q495Z4 193 aa9.65□□□□□ -0.86
LITAF-212ENST00000573332 A0A1W2PPM0 123 aa9.63□□□□□ -0.87
LITAF-212ENST00000573332 KRTAP13-3Q3SY46 172 aa9.63□□□□□ -0.87
LITAF-212ENST00000573332 C1orf195Q5TG92 126 aa9.63□□□□□ -0.87
LITAF-212ENST00000573332 COL5A1-AS1Q5SY13 56 aa9.62□□□□□ -0.87
LITAF-212ENST00000573332 ANKRD29Q8N6D5 301 aa9.62□□□□□ -0.87
LITAF-212ENST00000573332 A0A1W2PNM2 257 aa9.6□□□□□ -0.87
LITAF-212ENST00000573332 CDIP1Q9H305 208 aa9.6□□□□□ -0.87
LITAF-212ENST00000573332 UBR4Q5T4S7 5183 aa9.59□□□□□ -0.87
LITAF-212ENST00000573332 TRBV7-4A0A0J9YYF1 115 aa9.58□□□□□ -0.88
LITAF-212ENST00000573332 RBM3P98179 157 aaKnown RBP9.58□□□□□ -0.88
LITAF-212ENST00000573332 SS18L2Q9UHA2 77 aa9.58□□□□□ -0.88
LITAF-212ENST00000573332 PCP4L1A6NKN8 68 aa9.57□□□□□ -0.88
LITAF-212ENST00000573332 A0A1B0GV72 72 aa9.56□□□□□ -0.88
LITAF-212ENST00000573332 C9JAW5 83 aa9.56□□□□□ -0.88
LITAF-212ENST00000573332 JMJD7-PLA2G4BH0Y9G9 81 aa9.55□□□□□ -0.88
LITAF-212ENST00000573332 DSCR8Q96T75 97 aa9.55□□□□□ -0.88
LITAF-212ENST00000573332 A0A087WSZ3 146 aa9.54□□□□□ -0.88
LITAF-212ENST00000573332 CCKP06307 115 aa9.53□□□□□ -0.88
LITAF-212ENST00000573332 H3BT86 120 aa9.52□□□□□ -0.89
LITAF-212ENST00000573332 SPCS1Q9Y6A9 102 aa9.52□□□□□ -0.89
LITAF-212ENST00000573332 OBSCN-AS1Q96MR7 158 aa9.5□□□□□ -0.89
LITAF-212ENST00000573332 PDE6GP18545 87 aa9.48□□□□□ -0.89
LITAF-212ENST00000573332 LOC110117498A0A087WWA1 95 aa9.47□□□□□ -0.89
LITAF-212ENST00000573332 C21orf62-AS1Q17RA5 79 aa9.47□□□□□ -0.89
LITAF-212ENST00000573332 XP32Q5T750 250 aa9.47□□□□□ -0.89
LITAF-212ENST00000573332 Q6ZQT0 140 aa9.46□□□□□ -0.9
LITAF-212ENST00000573332 Q96NJ1 140 aa9.46□□□□□ -0.9
LITAF-212ENST00000573332 A0A1B0GW54 56 aa9.44□□□□□ -0.9
LITAF-212ENST00000573332 VPS25Q9BRG1 176 aa9.44□□□□□ -0.9
LITAF-212ENST00000573332 C9orf92A6NGG3 77 aa9.43□□□□□ -0.9
LITAF-212ENST00000573332 K7EP34 96 aa9.43□□□□□ -0.9
LITAF-212ENST00000573332 MTURNQ8N3F0 131 aa9.43□□□□□ -0.9
LITAF-212ENST00000573332 C14orf132Q9NPU4 83 aa9.42□□□□□ -0.9
LITAF-212ENST00000573332 LINC00472Q9H8W2 130 aa9.41□□□□□ -0.9
LITAF-212ENST00000573332 MUC17Q685J3 4493 aa9.4□□□□□ -0.9
LITAF-212ENST00000573332 SMCPP49901 116 aaPredicted RBP9.39□□□□□ -0.91
LITAF-212ENST00000573332 SEC61BP60468 96 aaKnown RBP9.38□□□□□ -0.91
LITAF-212ENST00000573332 PRO0461Q9UI25 63 aa9.38□□□□□ -0.91
LITAF-212ENST00000573332 GTF2H5Q6ZYL4 71 aa9.37□□□□□ -0.91
LITAF-212ENST00000573332 RNF213Q63HN8 5207 aa9.36□□□□□ -0.91
LITAF-212ENST00000573332 IGKV4-1P06312 121 aa9.35□□□□□ -0.91
LITAF-212ENST00000573332 SIGMAR1Q99720 223 aa9.33□□□□□ -0.92
LITAF-212ENST00000573332 DEFB116Q30KQ4 102 aa9.31□□□□□ -0.92
LITAF-212ENST00000573332 J3KT08 172 aa9.3□□□□□ -0.92
LITAF-212ENST00000573332 RPL37P61927 97 aaKnown RBP9.3□□□□□ -0.92
LITAF-212ENST00000573332 F8W1H4 67 aa9.29□□□□□ -0.92
LITAF-212ENST00000573332 LINC00313P59037 77 aa9.25□□□□□ -0.93
LITAF-212ENST00000573332 PCOTHQ58A44 107 aa9.25□□□□□ -0.93
LITAF-212ENST00000573332 Q75L30 129 aa9.25□□□□□ -0.93
LITAF-212ENST00000573332 DSCR10P59022 87 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms