RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
TRAPPC1-203ENST00000571739 IGLV7-46A0A075B6I9 117 aa4.91□□□□□ -1.62
TRAPPC1-203ENST00000571739 SMIM6P0DI80 62 aa4.91□□□□□ -1.62
TRAPPC1-203ENST00000571739 HRCT1Q6UXD1 115 aa4.91□□□□□ -1.62
TRAPPC1-203ENST00000571739 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC1-203ENST00000571739 TRIAP1O43715 76 aa4.9□□□□□ -1.63
TRAPPC1-203ENST00000571739 CD164Q04900 197 aa4.88□□□□□ -1.63
TRAPPC1-203ENST00000571739 CLEC2BQ92478 149 aa4.88□□□□□ -1.63
TRAPPC1-203ENST00000571739 IGLV8-61A0A075B6I0 122 aa4.87□□□□□ -1.63
TRAPPC1-203ENST00000571739 A0A1B0GX51 115 aa4.87□□□□□ -1.63
TRAPPC1-203ENST00000571739 OCIAD2Q56VL3 154 aa4.87□□□□□ -1.63
TRAPPC1-203ENST00000571739 FP248Q71RG6 208 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC1-203ENST00000571739 PSMB2P49721 201 aa4.86□□□□□ -1.63
TRAPPC1-203ENST00000571739 TPRXLQ17RH7 258 aa4.86□□□□□ -1.63
TRAPPC1-203ENST00000571739 PPDPFLQ8WWR9 84 aa4.86□□□□□ -1.63
TRAPPC1-203ENST00000571739 SNHG12Q9BXW3 62 aa4.86□□□□□ -1.63
TRAPPC1-203ENST00000571739 KRTAP13-3Q3SY46 172 aa4.85□□□□□ -1.63
TRAPPC1-203ENST00000571739 Q5XG85 94 aa4.85□□□□□ -1.63
TRAPPC1-203ENST00000571739 IGFL1Q6UW32 110 aa4.85□□□□□ -1.63
TRAPPC1-203ENST00000571739 F8WEM9 126 aa4.84□□□□□ -1.63
TRAPPC1-203ENST00000571739 SNCGO76070 127 aa4.84□□□□□ -1.63
TRAPPC1-203ENST00000571739 NDUFV3P56181 108 aaKnown RBP4.84□□□□□ -1.63
TRAPPC1-203ENST00000571739 H3BUT2 72 aa4.83□□□□□ -1.64
TRAPPC1-203ENST00000571739 COX6CP09669 75 aa4.83□□□□□ -1.64
TRAPPC1-203ENST00000571739 Q6JHZ5 121 aa4.83□□□□□ -1.64
TRAPPC1-203ENST00000571739 TSTD3H0UI37 97 aa4.82□□□□□ -1.64
TRAPPC1-203ENST00000571739 M0R143 59 aa4.82□□□□□ -1.64
TRAPPC1-203ENST00000571739 C1orf195Q5TG92 126 aa4.82□□□□□ -1.64
TRAPPC1-203ENST00000571739 LIMD2Q9BT23 127 aa4.82□□□□□ -1.64
TRAPPC1-203ENST00000571739 CDIP1Q9H305 208 aa4.82□□□□□ -1.64
TRAPPC1-203ENST00000571739 SCGB1C2P0DMR2 95 aa4.81□□□□□ -1.64
TRAPPC1-203ENST00000571739 FABP2P12104 132 aa4.81□□□□□ -1.64
TRAPPC1-203ENST00000571739 NAA38Q9BRA0 125 aaKnown RBP4.81□□□□□ -1.64
TRAPPC1-203ENST00000571739 RNF213Q63HN8 5207 aa4.8□□□□□ -1.64
TRAPPC1-203ENST00000571739 TRBV7-7A0A0K0K1E9 115 aa4.8□□□□□ -1.64
TRAPPC1-203ENST00000571739 H3BMG7 143 aa4.8□□□□□ -1.64
TRAPPC1-203ENST00000571739 MUC17Q685J3 4493 aa4.79□□□□□ -1.64
TRAPPC1-203ENST00000571739 LST1O00453 97 aa4.79□□□□□ -1.64
TRAPPC1-203ENST00000571739 GHRHP01286 108 aa4.79□□□□□ -1.64
TRAPPC1-203ENST00000571739 TRACP01848 142 aa4.79□□□□□ -1.64
TRAPPC1-203ENST00000571739 ORMDL1Q9P0S3 153 aa4.79□□□□□ -1.64
TRAPPC1-203ENST00000571739 TMEM256-PLSCR3K7ERE1 68 aa4.78□□□□□ -1.64
TRAPPC1-203ENST00000571739 DNAL4O96015 105 aa4.78□□□□□ -1.64
TRAPPC1-203ENST00000571739 ASB16-AS1Q495Z4 193 aa4.78□□□□□ -1.64
TRAPPC1-203ENST00000571739 Q6Q795 121 aa4.78□□□□□ -1.64
TRAPPC1-203ENST00000571739 A0A1W2PNM2 257 aa4.77□□□□□ -1.65
TRAPPC1-203ENST00000571739 TCL1BO95988 128 aa4.77□□□□□ -1.65
TRAPPC1-203ENST00000571739 H3BQ85 93 aa4.76□□□□□ -1.65
TRAPPC1-203ENST00000571739 UBE2V1Q13404 147 aa4.76□□□□□ -1.65
TRAPPC1-203ENST00000571739 BATFQ16520 125 aa4.76□□□□□ -1.65
TRAPPC1-203ENST00000571739 XP32Q5T750 250 aa4.76□□□□□ -1.65
TRAPPC1-203ENST00000571739 TEN1Q86WV5 123 aa4.76□□□□□ -1.65
TRAPPC1-203ENST00000571739 C9orf92A6NGG3 77 aa4.75□□□□□ -1.65
TRAPPC1-203ENST00000571739 BAALC-AS2P0C853 105 aa4.75□□□□□ -1.65
TRAPPC1-203ENST00000571739 A0A1B0GV72 72 aa4.74□□□□□ -1.65
TRAPPC1-203ENST00000571739 TAX1BP3O14907 124 aa4.74□□□□□ -1.65
TRAPPC1-203ENST00000571739 ANKRD29Q8N6D5 301 aa4.74□□□□□ -1.65
TRAPPC1-203ENST00000571739 A0A087WSZ3 146 aa4.73□□□□□ -1.65
TRAPPC1-203ENST00000571739 C9orf118A6NHY6 69 aa4.73□□□□□ -1.65
TRAPPC1-203ENST00000571739 ATXN8Q156A1 80 aa4.73□□□□□ -1.65
TRAPPC1-203ENST00000571739 KRTAP4-1Q9BYQ7 146 aa4.73□□□□□ -1.65
TRAPPC1-203ENST00000571739 MUC2Q02817 5179 aa4.72□□□□□ -1.65
TRAPPC1-203ENST00000571739 TRBV7-4A0A0J9YYF1 115 aa4.72□□□□□ -1.65
TRAPPC1-203ENST00000571739 Q96NJ1 140 aa4.72□□□□□ -1.65
TRAPPC1-203ENST00000571739 RBM3P98179 157 aaKnown RBP4.71□□□□□ -1.66
TRAPPC1-203ENST00000571739 TRBV20-1A0A075B6N2 111 aa4.7□□□□□ -1.66
TRAPPC1-203ENST00000571739 CCKP06307 115 aa4.69□□□□□ -1.66
TRAPPC1-203ENST00000571739 SEC61BP60468 96 aaKnown RBP4.69□□□□□ -1.66
TRAPPC1-203ENST00000571739 SS18L2Q9UHA2 77 aa4.69□□□□□ -1.66
TRAPPC1-203ENST00000571739 A0A1W2PPM0 123 aa4.68□□□□□ -1.66
TRAPPC1-203ENST00000571739 C9JAW5 83 aa4.68□□□□□ -1.66
TRAPPC1-203ENST00000571739 DSCR8Q96T75 97 aa4.68□□□□□ -1.66
TRAPPC1-203ENST00000571739 PCOTHQ58A44 107 aa4.67□□□□□ -1.66
TRAPPC1-203ENST00000571739 LYRM7Q5U5X0 104 aa4.67□□□□□ -1.66
TRAPPC1-203ENST00000571739 OBSCN-AS1Q96MR7 158 aa4.67□□□□□ -1.66
TRAPPC1-203ENST00000571739 LINC00472Q9H8W2 130 aa4.67□□□□□ -1.66
TRAPPC1-203ENST00000571739 JMJD7-PLA2G4BH0Y9G9 81 aa4.66□□□□□ -1.66
TRAPPC1-203ENST00000571739 VPS25Q9BRG1 176 aa4.66□□□□□ -1.66
TRAPPC1-203ENST00000571739 RPL37P61927 97 aaKnown RBP4.65□□□□□ -1.67
TRAPPC1-203ENST00000571739 DEFB116Q30KQ4 102 aa4.65□□□□□ -1.67
TRAPPC1-203ENST00000571739 Q6ZQT0 140 aa4.65□□□□□ -1.67
TRAPPC1-203ENST00000571739 MTURNQ8N3F0 131 aa4.65□□□□□ -1.67
TRAPPC1-203ENST00000571739 LOC110117498A0A087WWA1 95 aa4.64□□□□□ -1.67
TRAPPC1-203ENST00000571739 PCP4L1A6NKN8 68 aa4.64□□□□□ -1.67
TRAPPC1-203ENST00000571739 IGKV4-1P06312 121 aa4.63□□□□□ -1.67
TRAPPC1-203ENST00000571739 COL5A1-AS1Q5SY13 56 aa4.63□□□□□ -1.67
TRAPPC1-203ENST00000571739 C14orf132Q9NPU4 83 aa4.63□□□□□ -1.67
TRAPPC1-203ENST00000571739 SPCS1Q9Y6A9 102 aa4.63□□□□□ -1.67
TRAPPC1-203ENST00000571739 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
TRAPPC1-203ENST00000571739 H3BT86 120 aa4.62□□□□□ -1.67
TRAPPC1-203ENST00000571739 SMCPP49901 116 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC1-203ENST00000571739 NOTCH2NLQ7Z3S9 236 aa4.62□□□□□ -1.67
TRAPPC1-203ENST00000571739 PDE6GP18545 87 aa4.61□□□□□ -1.67
TRAPPC1-203ENST00000571739 DSCR10P59022 87 aa4.61□□□□□ -1.67
TRAPPC1-203ENST00000571739 LCE2AQ5TA79 106 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC1-203ENST00000571739 Q75L30 129 aa4.6□□□□□ -1.67
TRAPPC1-203ENST00000571739 SIGMAR1Q99720 223 aa4.6□□□□□ -1.67
TRAPPC1-203ENST00000571739 A0A0U1RQV1 116 aa4.59□□□□□ -1.67
TRAPPC1-203ENST00000571739 A0A1B0GW54 56 aa4.59□□□□□ -1.67
TRAPPC1-203ENST00000571739 A8MUU9 505 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms