RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 LAMA1P25391 3075 aa1.94□□□□□ -2.1
CHD9-220ENST00000569794 GNGT1P63211 74 aa1.94□□□□□ -2.1
CHD9-220ENST00000569794 HEPN1Q6WQI6 88 aa1.94□□□□□ -2.1
CHD9-220ENST00000569794 Q6ZRX8 168 aa1.94□□□□□ -2.1
CHD9-220ENST00000569794 PLAC4Q8WY50 150 aa1.94□□□□□ -2.1
CHD9-220ENST00000569794 LINC00846Q9NV44 126 aa1.94□□□□□ -2.1
CHD9-220ENST00000569794 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
CHD9-220ENST00000569794 CD52P31358 61 aa1.93□□□□□ -2.1
CHD9-220ENST00000569794 SPRR4Q96PI1 79 aa1.93□□□□□ -2.1
CHD9-220ENST00000569794 SMR3AQ99954 134 aa1.93□□□□□ -2.1
CHD9-220ENST00000569794 ACANP16112 2415 aa1.93□□□□□ -2.1
CHD9-220ENST00000569794 KMT2CQ8NEZ4 4911 aaKnown RBP1.93□□□□□ -2.1
CHD9-220ENST00000569794 DOCK11Q5JSL3 2073 aa1.92□□□□□ -2.1
CHD9-220ENST00000569794 ZNF236Q9UL36 1845 aa1.92□□□□□ -2.1
CHD9-220ENST00000569794 A0A096LNT2 108 aa1.92□□□□□ -2.1
CHD9-220ENST00000569794 GVQW2A0A096LPI5 108 aaPredicted RBP1.92□□□□□ -2.1
CHD9-220ENST00000569794 UMAD1C9J7I0 102 aa1.92□□□□□ -2.1
CHD9-220ENST00000569794 DEFB119Q8N690 84 aa1.92□□□□□ -2.1
CHD9-220ENST00000569794 TMEM263Q8WUH6 116 aaKnown RBP1.92□□□□□ -2.1
CHD9-220ENST00000569794 LINC00472Q9H8W2 130 aa1.92□□□□□ -2.1
CHD9-220ENST00000569794 PROK2Q9HC23 129 aa1.92□□□□□ -2.1
CHD9-220ENST00000569794 ASCC3Q8N3C0 2202 aaKnown RBP1.92□□□□□ -2.1
CHD9-220ENST00000569794 PCLOQ9Y6V0 5065 aa1.91□□□□□ -2.1
CHD9-220ENST00000569794 NSD1Q96L73 2696 aaPredicted RBP1.91□□□□□ -2.1
CHD9-220ENST00000569794 A0A087WXM4 84 aa1.91□□□□□ -2.1
CHD9-220ENST00000569794 H0Y9P7 68 aa1.91□□□□□ -2.1
CHD9-220ENST00000569794 HAMPP81172 84 aa1.91□□□□□ -2.1
CHD9-220ENST00000569794 Q6JHZ5 121 aa1.91□□□□□ -2.1
CHD9-220ENST00000569794 TSC2P49815 1807 aa1.91□□□□□ -2.1
CHD9-220ENST00000569794 CUBNO60494 3623 aa1.9□□□□□ -2.1
CHD9-220ENST00000569794 UBR4Q5T4S7 5183 aa1.9□□□□□ -2.1
CHD9-220ENST00000569794 DLG5Q8TDM6 1919 aa1.9□□□□□ -2.11
CHD9-220ENST00000569794 S100ZQ8WXG8 99 aa1.9□□□□□ -2.11
CHD9-220ENST00000569794 UBE2D4Q9Y2X8 147 aa1.9□□□□□ -2.11
CHD9-220ENST00000569794 EPPK1P58107 5090 aaKnown RBP1.9□□□□□ -2.11
CHD9-220ENST00000569794 TENM1Q9UKZ4 2725 aa1.89□□□□□ -2.11
CHD9-220ENST00000569794 TCHHQ07283 1943 aa1.89□□□□□ -2.11
CHD9-220ENST00000569794 DEFB121Q5J5C9 76 aa1.89□□□□□ -2.11
CHD9-220ENST00000569794 C10orf113Q5VZT2 155 aa1.89□□□□□ -2.11
CHD9-220ENST00000569794 PRRC2CQ9Y520 2896 aaKnown RBP1.89□□□□□ -2.11
CHD9-220ENST00000569794 SIPA1L3O60292 1781 aaPredicted RBP1.89□□□□□ -2.11
CHD9-220ENST00000569794 MXRA5Q9NR99 2828 aa1.89□□□□□ -2.11
CHD9-220ENST00000569794 HYDINQ4G0P3 5121 aa1.89□□□□□ -2.11
CHD9-220ENST00000569794 VWFP04275 2813 aa1.88□□□□□ -2.11
CHD9-220ENST00000569794 BSNQ9UPA5 3926 aa1.88□□□□□ -2.11
CHD9-220ENST00000569794 A0A1B0GUT8 65 aa1.88□□□□□ -2.11
CHD9-220ENST00000569794 RPL37P61927 97 aaKnown RBP1.88□□□□□ -2.11
CHD9-220ENST00000569794 KRTAP6-3Q3LI67 103 aa1.88□□□□□ -2.11
CHD9-220ENST00000569794 TACC2O95359 2948 aa1.88□□□□□ -2.11
CHD9-220ENST00000569794 DCHS2Q6V1P9 2916 aa1.88□□□□□ -2.11
CHD9-220ENST00000569794 ZNF469Q96JG9 3925 aaPredicted RBP1.87□□□□□ -2.11
CHD9-220ENST00000569794 F5P12259 2224 aa1.87□□□□□ -2.11
CHD9-220ENST00000569794 GOLGA4Q13439 2230 aaKnown RBP1.87□□□□□ -2.11
CHD9-220ENST00000569794 G3V318 75 aa1.87□□□□□ -2.11
CHD9-220ENST00000569794 SPINK7P58062 85 aa1.87□□□□□ -2.11
CHD9-220ENST00000569794 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.87□□□□□ -2.11
CHD9-220ENST00000569794 SPATA8Q6RVD6 105 aa1.87□□□□□ -2.11
CHD9-220ENST00000569794 MGAM2Q2M2H8 2515 aa1.86□□□□□ -2.11
CHD9-220ENST00000569794 TRBV6-1A0A0K0K1D8 114 aa1.86□□□□□ -2.11
CHD9-220ENST00000569794 LYNX1P0DP58 116 aa1.86□□□□□ -2.11
CHD9-220ENST00000569794 COX6B1P14854 86 aa1.86□□□□□ -2.11
CHD9-220ENST00000569794 ATP5EP2Q5VTU8 51 aa1.86□□□□□ -2.11
CHD9-220ENST00000569794 WNK1Q9H4A3 2382 aa1.86□□□□□ -2.11
CHD9-220ENST00000569794 RYR1P21817 5038 aa1.86□□□□□ -2.11
CHD9-220ENST00000569794 KNTC1P50748 2209 aa1.86□□□□□ -2.11
CHD9-220ENST00000569794 PIN1P1O15428 100 aa1.85□□□□□ -2.11
CHD9-220ENST00000569794 ANK2Q01484 3957 aa1.85□□□□□ -2.11
CHD9-220ENST00000569794 MAP1AP78559 2803 aaPredicted RBP1.84□□□□□ -2.11
CHD9-220ENST00000569794 H3BVH4 76 aa1.84□□□□□ -2.11
CHD9-220ENST00000569794 IFI27P40305 119 aaPredicted RBP1.84□□□□□ -2.11
CHD9-220ENST00000569794 FXYD6P3P58550 94 aa1.84□□□□□ -2.11
CHD9-220ENST00000569794 PLAC8Q9NZF1 115 aa1.84□□□□□ -2.11
CHD9-220ENST00000569794 KIF20BQ96Q89 1820 aa1.84□□□□□ -2.12
CHD9-220ENST00000569794 RYR2Q92736 4967 aa1.83□□□□□ -2.12
CHD9-220ENST00000569794 PDCD11Q14690 1871 aaKnown RBP1.83□□□□□ -2.12
CHD9-220ENST00000569794 ABCA1O95477 2261 aa1.83□□□□□ -2.12
CHD9-220ENST00000569794 LAMA4Q16363 1823 aa1.82□□□□□ -2.12
CHD9-220ENST00000569794 TENM3Q9P273 2699 aa1.82□□□□□ -2.12
CHD9-220ENST00000569794 A0A1B0GU69 56 aa1.82□□□□□ -2.12
CHD9-220ENST00000569794 S100A3P33764 101 aa1.82□□□□□ -2.12
CHD9-220ENST00000569794 SSBP3-AS1Q7Z2R9 100 aa1.82□□□□□ -2.12
CHD9-220ENST00000569794 UBE2DNLQ8IWF7 75 aa1.82□□□□□ -2.12
CHD9-220ENST00000569794 HERC2O95714 4834 aa1.81□□□□□ -2.12
CHD9-220ENST00000569794 DEFB109BQ30KR1 87 aa1.81□□□□□ -2.12
CHD9-220ENST00000569794 HILPDAQ9Y5L2 63 aa1.81□□□□□ -2.12
CHD9-220ENST00000569794 A0A087WWC5 75 aa1.8□□□□□ -2.12
CHD9-220ENST00000569794 TRBV7-4A0A0J9YYF1 115 aa1.8□□□□□ -2.12
CHD9-220ENST00000569794 DEFB112Q30KQ8 113 aa1.8□□□□□ -2.12
CHD9-220ENST00000569794 GNG13Q9P2W3 67 aa1.8□□□□□ -2.12
CHD9-220ENST00000569794 SVEP1Q4LDE5 3571 aa1.8□□□□□ -2.12
CHD9-220ENST00000569794 ZANQ9Y493 2812 aa1.79□□□□□ -2.12
CHD9-220ENST00000569794 MYO7BQ6PIF6 2116 aa1.78□□□□□ -2.12
CHD9-220ENST00000569794 NCOA6Q14686 2063 aaPredicted RBP1.78□□□□□ -2.12
CHD9-220ENST00000569794 TRAV21A0A0B4J279 112 aa1.78□□□□□ -2.12
CHD9-220ENST00000569794 NDUFB1O75438 58 aa1.78□□□□□ -2.12
CHD9-220ENST00000569794 COX8AP10176 69 aa1.78□□□□□ -2.12
CHD9-220ENST00000569794 Q6ZSA8 131 aa1.78□□□□□ -2.12
CHD9-220ENST00000569794 WFDC9Q8NEX5 89 aa1.78□□□□□ -2.12
CHD9-220ENST00000569794 MYH4Q9Y623 1939 aa1.78□□□□□ -2.13
CHD9-220ENST00000569794 ANGP03950 147 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms