RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 C9orf153Q5TBE3 101 aa7.4□□□□□ -1.22
TSC2-220ENST00000568238 SPAG11AQ6PDA7 123 aa7.4□□□□□ -1.22
TSC2-220ENST00000568238 IGLV5-48A0A075B6I7 105 aa7.39□□□□□ -1.23
TSC2-220ENST00000568238 IGLV7-46A0A075B6I9 117 aa7.39□□□□□ -1.23
TSC2-220ENST00000568238 CLEC2BQ92478 149 aa7.39□□□□□ -1.23
TSC2-220ENST00000568238 COX6CP09669 75 aa7.38□□□□□ -1.23
TSC2-220ENST00000568238 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.38□□□□□ -1.23
TSC2-220ENST00000568238 NAA38Q9BRA0 125 aaKnown RBP7.38□□□□□ -1.23
TSC2-220ENST00000568238 CDIP1Q9H305 208 aa7.38□□□□□ -1.23
TSC2-220ENST00000568238 LAMTOR3Q9UHA4 124 aa7.38□□□□□ -1.23
TSC2-220ENST00000568238 SNCGO76070 127 aa7.37□□□□□ -1.23
TSC2-220ENST00000568238 C4orf48Q5BLP8 95 aa7.37□□□□□ -1.23
TSC2-220ENST00000568238 Q8N377 158 aa7.37□□□□□ -1.23
TSC2-220ENST00000568238 Q8NBF4 154 aa7.37□□□□□ -1.23
TSC2-220ENST00000568238 SCGB1C2P0DMR2 95 aa7.36□□□□□ -1.23
TSC2-220ENST00000568238 FAT4Q6V0I7 4981 aa7.35□□□□□ -1.23
TSC2-220ENST00000568238 SMIM29Q86T20 159 aa7.35□□□□□ -1.23
TSC2-220ENST00000568238 A0A1B0GX51 115 aa7.33□□□□□ -1.24
TSC2-220ENST00000568238 PCP4L1A6NKN8 68 aa7.33□□□□□ -1.24
TSC2-220ENST00000568238 FP248Q71RG6 208 aaPredicted RBP7.33□□□□□ -1.24
TSC2-220ENST00000568238 SSBP3-AS1Q7Z2R9 100 aa7.33□□□□□ -1.24
TSC2-220ENST00000568238 DNAL4O96015 105 aa7.32□□□□□ -1.24
TSC2-220ENST00000568238 F8WEM9 126 aa7.31□□□□□ -1.24
TSC2-220ENST00000568238 SPINK1P00995 79 aa7.31□□□□□ -1.24
TSC2-220ENST00000568238 SNHG12Q9BXW3 62 aa7.31□□□□□ -1.24
TSC2-220ENST00000568238 LST1O00453 97 aa7.3□□□□□ -1.24
TSC2-220ENST00000568238 OCIAD2Q56VL3 154 aa7.3□□□□□ -1.24
TSC2-220ENST00000568238 PPDPFLQ8WWR9 84 aa7.3□□□□□ -1.24
TSC2-220ENST00000568238 H3BUT2 72 aa7.29□□□□□ -1.24
TSC2-220ENST00000568238 TAX1BP3O14907 124 aa7.29□□□□□ -1.24
TSC2-220ENST00000568238 FABP2P12104 132 aa7.29□□□□□ -1.24
TSC2-220ENST00000568238 A0A0G2JQZ4 141 aa7.28□□□□□ -1.24
TSC2-220ENST00000568238 HRCT1Q6UXD1 115 aa7.28□□□□□ -1.24
TSC2-220ENST00000568238 ORMDL1Q9P0S3 153 aa7.28□□□□□ -1.24
TSC2-220ENST00000568238 TRACP01848 142 aa7.27□□□□□ -1.25
TSC2-220ENST00000568238 RPS29P62273 56 aaKnown RBP7.27□□□□□ -1.25
TSC2-220ENST00000568238 C9orf118A6NHY6 69 aa7.26□□□□□ -1.25
TSC2-220ENST00000568238 TCL1BO95988 128 aa7.26□□□□□ -1.25
TSC2-220ENST00000568238 GHRHP01286 108 aa7.26□□□□□ -1.25
TSC2-220ENST00000568238 ATXN8Q156A1 80 aa7.26□□□□□ -1.25
TSC2-220ENST00000568238 KRTAP13-3Q3SY46 172 aa7.26□□□□□ -1.25
TSC2-220ENST00000568238 LYRM7Q5U5X0 104 aa7.26□□□□□ -1.25
TSC2-220ENST00000568238 COL5A1-AS1Q5SY13 56 aa7.25□□□□□ -1.25
TSC2-220ENST00000568238 A0A1B0GV72 72 aa7.24□□□□□ -1.25
TSC2-220ENST00000568238 NDUFV3P56181 108 aaKnown RBP7.24□□□□□ -1.25
TSC2-220ENST00000568238 IGLV8-61A0A075B6I0 122 aa7.23□□□□□ -1.25
TSC2-220ENST00000568238 A0A1W2PPM0 123 aa7.23□□□□□ -1.25
TSC2-220ENST00000568238 H3BQ85 93 aa7.22□□□□□ -1.25
TSC2-220ENST00000568238 LCE2AQ5TA79 106 aaPredicted RBP7.22□□□□□ -1.25
TSC2-220ENST00000568238 Q6JHZ5 121 aa7.22□□□□□ -1.25
TSC2-220ENST00000568238 IGFL1Q6UW32 110 aa7.22□□□□□ -1.25
TSC2-220ENST00000568238 H3BMG7 143 aa7.21□□□□□ -1.26
TSC2-220ENST00000568238 TMEM256-PLSCR3K7ERE1 68 aa7.21□□□□□ -1.26
TSC2-220ENST00000568238 TRBV20-1A0A075B6N2 111 aa7.2□□□□□ -1.26
TSC2-220ENST00000568238 CD164Q04900 197 aa7.2□□□□□ -1.26
TSC2-220ENST00000568238 BAALC-AS2P0C853 105 aa7.19□□□□□ -1.26
TSC2-220ENST00000568238 ASB16-AS1Q495Z4 193 aa7.19□□□□□ -1.26
TSC2-220ENST00000568238 C9JAW5 83 aa7.18□□□□□ -1.26
TSC2-220ENST00000568238 UBE2V1Q13404 147 aa7.18□□□□□ -1.26
TSC2-220ENST00000568238 ANKRD29Q8N6D5 301 aa7.18□□□□□ -1.26
TSC2-220ENST00000568238 LIMD2Q9BT23 127 aa7.18□□□□□ -1.26
TSC2-220ENST00000568238 SEC61BP60468 96 aaKnown RBP7.17□□□□□ -1.26
TSC2-220ENST00000568238 SPCS1Q9Y6A9 102 aa7.16□□□□□ -1.26
TSC2-220ENST00000568238 TRBV7-7A0A0K0K1E9 115 aa7.14□□□□□ -1.27
TSC2-220ENST00000568238 MTURNQ8N3F0 131 aa7.14□□□□□ -1.27
TSC2-220ENST00000568238 KRTAP9-2Q9BYQ4 174 aa7.13□□□□□ -1.27
TSC2-220ENST00000568238 XP32Q5T750 250 aa7.12□□□□□ -1.27
TSC2-220ENST00000568238 A0A1W2PNM2 257 aa7.11□□□□□ -1.27
TSC2-220ENST00000568238 RBM3P98179 157 aaKnown RBP7.11□□□□□ -1.27
TSC2-220ENST00000568238 Q5XG85 94 aa7.11□□□□□ -1.27
TSC2-220ENST00000568238 TEN1Q86WV5 123 aa7.11□□□□□ -1.27
TSC2-220ENST00000568238 K7EP34 96 aa7.1□□□□□ -1.27
TSC2-220ENST00000568238 Q6Q795 121 aa7.1□□□□□ -1.27
TSC2-220ENST00000568238 H3BT86 120 aa7.09□□□□□ -1.27
TSC2-220ENST00000568238 CCKP06307 115 aa7.09□□□□□ -1.27
TSC2-220ENST00000568238 DSCR8Q96T75 97 aa7.09□□□□□ -1.27
TSC2-220ENST00000568238 VPS25Q9BRG1 176 aa7.09□□□□□ -1.27
TSC2-220ENST00000568238 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
TSC2-220ENST00000568238 A0A087WSZ3 146 aa7.08□□□□□ -1.28
TSC2-220ENST00000568238 TRBV7-4A0A0J9YYF1 115 aa7.08□□□□□ -1.28
TSC2-220ENST00000568238 C1orf195Q5TG92 126 aa7.08□□□□□ -1.28
TSC2-220ENST00000568238 JMJD7-PLA2G4BH0Y9G9 81 aa7.07□□□□□ -1.28
TSC2-220ENST00000568238 C14orf132Q9NPU4 83 aa7.06□□□□□ -1.28
TSC2-220ENST00000568238 SS18L2Q9UHA2 77 aa7.06□□□□□ -1.28
TSC2-220ENST00000568238 GTF2H5Q6ZYL4 71 aa7.04□□□□□ -1.28
TSC2-220ENST00000568238 OBSCN-AS1Q96MR7 158 aa7.04□□□□□ -1.28
TSC2-220ENST00000568238 LOC110117498A0A087WWA1 95 aa7.03□□□□□ -1.28
TSC2-220ENST00000568238 C9orf92A6NGG3 77 aa7.03□□□□□ -1.28
TSC2-220ENST00000568238 SMCPP49901 116 aaPredicted RBP7.03□□□□□ -1.28
TSC2-220ENST00000568238 Q6ZQT0 140 aa7.03□□□□□ -1.28
TSC2-220ENST00000568238 PRO0461Q9UI25 63 aa7.03□□□□□ -1.28
TSC2-220ENST00000568238 PDE6GP18545 87 aa6.99□□□□□ -1.29
TSC2-220ENST00000568238 PCOTHQ58A44 107 aa6.99□□□□□ -1.29
TSC2-220ENST00000568238 Q96NJ1 140 aa6.97□□□□□ -1.29
TSC2-220ENST00000568238 SIGMAR1Q99720 223 aa6.96□□□□□ -1.3
TSC2-220ENST00000568238 DEFB116Q30KQ4 102 aa6.95□□□□□ -1.3
TSC2-220ENST00000568238 F8W1H4 67 aa6.94□□□□□ -1.3
TSC2-220ENST00000568238 C21orf62-AS1Q17RA5 79 aa6.94□□□□□ -1.3
TSC2-220ENST00000568238 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
TSC2-220ENST00000568238 A0A1B0GV90 55 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms