RNA–Protein interactions for RNA: ENST00000567887.5

MACF1-232, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene MACF1, Length 24,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-232ENST00000567887 KRTAP4-16G5E9R7 235 aaPredicted RBP3.47□□□□□ -1.85
MACF1-232ENST00000567887 A6NN06 94 aa3.47□□□□□ -1.85
MACF1-232ENST00000567887 KRTAP10-1P60331 282 aa3.47□□□□□ -1.85
MACF1-232ENST00000567887 KRTAP11-1Q8IUC1 163 aa3.46□□□□□ -1.86
MACF1-232ENST00000567887 A0A087X002 238 aa3.45□□□□□ -1.86
MACF1-232ENST00000567887 NOTCH2NLQ7Z3S9 236 aa3.45□□□□□ -1.86
MACF1-232ENST00000567887 IGF2RP11717 2491 aa3.44□□□□□ -1.86
MACF1-232ENST00000567887 GCN1Q92616 2671 aaKnown RBP3.43□□□□□ -1.86
MACF1-232ENST00000567887 A0A1B0GVY2 172 aa3.43□□□□□ -1.86
MACF1-232ENST00000567887 COL4A4P53420 1690 aaPredicted RBP3.43□□□□□ -1.86
MACF1-232ENST00000567887 ADAMTS20P59510 1910 aa3.43□□□□□ -1.86
MACF1-232ENST00000567887 ANKRD17O75179 2603 aaKnown RBP3.42□□□□□ -1.86
MACF1-232ENST00000567887 FASNP49327 2511 aaKnown RBP3.41□□□□□ -1.86
MACF1-232ENST00000567887 KRTAP10-2P60368 255 aa3.41□□□□□ -1.86
MACF1-232ENST00000567887 EPG5Q9HCE0 2579 aa3.38□□□□□ -1.87
MACF1-232ENST00000567887 UNC79Q9P2D8 2635 aa3.37□□□□□ -1.87
MACF1-232ENST00000567887 SPRR1AP35321 89 aa3.36□□□□□ -1.87
MACF1-232ENST00000567887 DMBT1Q9UGM3 2413 aaPredicted RBP3.36□□□□□ -1.87
MACF1-232ENST00000567887 MAST4O15021 2626 aa3.35□□□□□ -1.87
MACF1-232ENST00000567887 PP632Q6XCG6 107 aa3.35□□□□□ -1.87
MACF1-232ENST00000567887 MAP1AP78559 2803 aaPredicted RBP3.35□□□□□ -1.87
MACF1-232ENST00000567887 KRTAP29-1A8MX34 341 aaPredicted RBP3.33□□□□□ -1.88
MACF1-232ENST00000567887 ATRQ13535 2644 aa3.33□□□□□ -1.88
MACF1-232ENST00000567887 FLNBO75369 2602 aaKnown RBP3.3□□□□□ -1.88
MACF1-232ENST00000567887 AKAP13Q12802 2813 aa3.3□□□□□ -1.88
MACF1-232ENST00000567887 NBEAL1Q6ZS30 2694 aa3.3□□□□□ -1.88
MACF1-232ENST00000567887 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
MACF1-232ENST00000567887 USP24Q9UPU5 2620 aa3.3□□□□□ -1.88
MACF1-232ENST00000567887 CPAMD8Q8IZJ3 1885 aa3.29□□□□□ -1.88
MACF1-232ENST00000567887 NOTCH1P46531 2555 aa3.28□□□□□ -1.88
MACF1-232ENST00000567887 COL27A1Q8IZC6 1860 aaPredicted RBP3.28□□□□□ -1.88
MACF1-232ENST00000567887 LTBP2Q14767 1821 aa3.28□□□□□ -1.88
MACF1-232ENST00000567887 KRTAP1-5Q9BYS1 174 aa3.27□□□□□ -1.89
MACF1-232ENST00000567887 LCE6AA0A183 80 aa3.26□□□□□ -1.89
MACF1-232ENST00000567887 HELZ2Q9BYK8 2649 aaKnown RBP3.25□□□□□ -1.89
MACF1-232ENST00000567887 STAB1Q9NY15 2570 aa3.24□□□□□ -1.89
MACF1-232ENST00000567887 MGAM2Q2M2H8 2515 aa3.23□□□□□ -1.89
MACF1-232ENST00000567887 HECTD1Q9ULT8 2610 aa3.23□□□□□ -1.89
MACF1-232ENST00000567887 COL6A5A8TX70 2615 aa3.23□□□□□ -1.89
MACF1-232ENST00000567887 COL4A2P08572 1712 aa3.23□□□□□ -1.89
MACF1-232ENST00000567887 SETXQ7Z333 2677 aaKnown RBP3.22□□□□□ -1.89
MACF1-232ENST00000567887 PRO2289Q9P1D8 64 aa3.21□□□□□ -1.9
MACF1-232ENST00000567887 ZNF292O60281 2723 aa3.21□□□□□ -1.9
MACF1-232ENST00000567887 FLNAP21333 2647 aaKnown RBP3.21□□□□□ -1.9
MACF1-232ENST00000567887 ITPR3Q14573 2671 aa3.2□□□□□ -1.9
MACF1-232ENST00000567887 CHD6Q8TD26 2715 aa3.2□□□□□ -1.9
MACF1-232ENST00000567887 NIPBLQ6KC79 2804 aaeCLIP3.19□□□□□ -1.93e-6■■■□□ 17.1
MACF1-232ENST00000567887 KRTAP1-3Q8IUG1 177 aa3.19□□□□□ -1.9
MACF1-232ENST00000567887 KRTAP1-1Q07627 177 aa3.19□□□□□ -1.9
MACF1-232ENST00000567887 CENPFP49454 3210 aa3.19□□□□□ -1.9
MACF1-232ENST00000567887 Q6ZRN7 208 aaPredicted RBP3.19□□□□□ -1.9
MACF1-232ENST00000567887 MUC22E2RYF6 1773 aaPredicted RBP3.18□□□□□ -1.9
MACF1-232ENST00000567887 UTP20O75691 2785 aaKnown RBP3.18□□□□□ -1.9
MACF1-232ENST00000567887 TRANK1O15050 2925 aa3.16□□□□□ -1.9
MACF1-232ENST00000567887 KRTAP13-2Q52LG2 175 aa3.16□□□□□ -1.9
MACF1-232ENST00000567887 NSD1Q96L73 2696 aaPredicted RBP3.16□□□□□ -1.9
MACF1-232ENST00000567887 STAB2Q8WWQ8 2551 aa3.15□□□□□ -1.91
MACF1-232ENST00000567887 H0YAA0 97 aa3.15□□□□□ -1.91
MACF1-232ENST00000567887 PCSK5Q92824 1860 aa3.14□□□□□ -1.91
MACF1-232ENST00000567887 TEP1Q99973 2627 aaKnown RBP3.13□□□□□ -1.91
MACF1-232ENST00000567887 BPTFQ12830 3046 aa3.13□□□□□ -1.91
MACF1-232ENST00000567887 TEX15Q9BXT5 2789 aa3.12□□□□□ -1.91
MACF1-232ENST00000567887 CFAP46Q8IYW2 2715 aa3.12□□□□□ -1.91
MACF1-232ENST00000567887 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
MACF1-232ENST00000567887 DSPP15924 2871 aaKnown RBP3.11□□□□□ -1.91
MACF1-232ENST00000567887 RPS29P62273 56 aaKnown RBP3.1□□□□□ -1.91
MACF1-232ENST00000567887 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
MACF1-232ENST00000567887 EP400Q96L91 3159 aa3.09□□□□□ -1.91
MACF1-232ENST00000567887 FLNCQ14315 2725 aa3.08□□□□□ -1.92
MACF1-232ENST00000567887 BAHCC1Q9P281 2608 aa3.07□□□□□ -1.92
MACF1-232ENST00000567887 KMT2BQ9UMN6 2715 aaPredicted RBP3.07□□□□□ -1.92
MACF1-232ENST00000567887 KRTAP7-1Q8IUC3 87 aa3.06□□□□□ -1.92
MACF1-232ENST00000567887 CRCT1Q9UGL9 99 aa3.06□□□□□ -1.92
MACF1-232ENST00000567887 A0A0C4DFX4 3053 aa3.06□□□□□ -1.92
MACF1-232ENST00000567887 UBR5O95071 2799 aaPredicted RBP3.05□□□□□ -1.92
MACF1-232ENST00000567887 XP32Q5T750 250 aa3.02□□□□□ -1.93
MACF1-232ENST00000567887 TPRXLQ17RH7 258 aa3.01□□□□□ -1.93
MACF1-232ENST00000567887 ITPR1Q14643 2758 aa3.01□□□□□ -1.93
MACF1-232ENST00000567887 IGSF10Q6WRI0 2623 aa3□□□□□ -1.93
MACF1-232ENST00000567887 DNAH12Q6ZR08 3092 aa2.99□□□□□ -1.93
MACF1-232ENST00000567887 FRYLO94915 3013 aa2.99□□□□□ -1.93
MACF1-232ENST00000567887 CHD9Q3L8U1 2897 aa2.98□□□□□ -1.93
MACF1-232ENST00000567887 ITPR2Q14571 2701 aa2.98□□□□□ -1.93
MACF1-232ENST00000567887 KALRNO60229 2985 aa2.98□□□□□ -1.93
MACF1-232ENST00000567887 APCP25054 2843 aa2.97□□□□□ -1.93
MACF1-232ENST00000567887 KRTAP13-1Q8IUC0 172 aa2.97□□□□□ -1.93
MACF1-232ENST00000567887 INE1O15225 51 aa2.96□□□□□ -1.94
MACF1-232ENST00000567887 KRTAP13-4Q3LI77 160 aa2.95□□□□□ -1.94
MACF1-232ENST00000567887 HIVEP1P15822 2718 aa2.95□□□□□ -1.94
MACF1-232ENST00000567887 NBEAL2Q6ZNJ1 2754 aa2.94□□□□□ -1.94
MACF1-232ENST00000567887 NBEAQ8NFP9 2946 aa2.93□□□□□ -1.94
MACF1-232ENST00000567887 TENM3Q9P273 2699 aa2.93□□□□□ -1.94
MACF1-232ENST00000567887 LAMA2P24043 3122 aaKnown RBP2.91□□□□□ -1.94
MACF1-232ENST00000567887 NF1P21359 2839 aa2.9□□□□□ -1.94
MACF1-232ENST00000567887 KRTAP12-1P59990 96 aa2.9□□□□□ -1.94
MACF1-232ENST00000567887 CHD7Q9P2D1 2997 aa2.89□□□□□ -1.95
MACF1-232ENST00000567887 CEP350Q5VT06 3117 aa2.89□□□□□ -1.95
MACF1-232ENST00000567887 KRTAP10-5P60370 271 aa2.87□□□□□ -1.95
MACF1-232ENST00000567887 TENM1Q9UKZ4 2725 aa2.87□□□□□ -1.95
MACF1-232ENST00000567887 ZZEF1O43149 2961 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms