RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 KRTAP1-3Q8IUG1 177 aa7.86□□□□□ -1.15
CSPG4P13-202ENST00000567704 KRTAP10-11P60412 298 aa7.85□□□□□ -1.15
CSPG4P13-202ENST00000567704 PRAC1Q96KF2 57 aa7.85□□□□□ -1.15
CSPG4P13-202ENST00000567704 IGSF10Q6WRI0 2623 aa7.85□□□□□ -1.15
CSPG4P13-202ENST00000567704 ZNF861PO60384 105 aa7.85□□□□□ -1.15
CSPG4P13-202ENST00000567704 CNBPP62633 177 aaKnown RBP7.85□□□□□ -1.15
CSPG4P13-202ENST00000567704 CELSR3Q9NYQ7 3312 aa7.84□□□□□ -1.15
CSPG4P13-202ENST00000567704 LAMA1P25391 3075 aa7.83□□□□□ -1.16
CSPG4P13-202ENST00000567704 LINC01558Q9Y6Z2 57 aa7.83□□□□□ -1.16
CSPG4P13-202ENST00000567704 NBEAL2Q6ZNJ1 2754 aa7.81□□□□□ -1.16
CSPG4P13-202ENST00000567704 LINC01554Q52M75 96 aa7.81□□□□□ -1.16
CSPG4P13-202ENST00000567704 NOTCH1P46531 2555 aa7.79□□□□□ -1.16
CSPG4P13-202ENST00000567704 PLA2G1BP04054 148 aaKnown RBP7.78□□□□□ -1.16
CSPG4P13-202ENST00000567704 Q8N1X5 172 aa7.78□□□□□ -1.16
CSPG4P13-202ENST00000567704 PSORS1C2Q9UIG4 136 aa7.78□□□□□ -1.16
CSPG4P13-202ENST00000567704 CFAP46Q8IYW2 2715 aa7.78□□□□□ -1.16
CSPG4P13-202ENST00000567704 KALRNO60229 2985 aa7.78□□□□□ -1.16
CSPG4P13-202ENST00000567704 MMP24-AS1A0A0U1RRL7 71 aa7.77□□□□□ -1.16
CSPG4P13-202ENST00000567704 SPINK7P58062 85 aa7.77□□□□□ -1.16
CSPG4P13-202ENST00000567704 APLNQ9ULZ1 77 aa7.77□□□□□ -1.16
CSPG4P13-202ENST00000567704 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
CSPG4P13-202ENST00000567704 H3BS24 57 aa7.77□□□□□ -1.17
CSPG4P13-202ENST00000567704 KRTAP1-1Q07627 177 aa7.76□□□□□ -1.17
CSPG4P13-202ENST00000567704 HRES1P13985 223 aa7.75□□□□□ -1.17
CSPG4P13-202ENST00000567704 SPRR1AP35321 89 aa7.74□□□□□ -1.17
CSPG4P13-202ENST00000567704 K7EIL1 84 aa7.73□□□□□ -1.17
CSPG4P13-202ENST00000567704 NBEAL1Q6ZS30 2694 aa7.72□□□□□ -1.17
CSPG4P13-202ENST00000567704 A0A087WTM6 91 aa7.72□□□□□ -1.17
CSPG4P13-202ENST00000567704 IGLV7-43P04211 117 aa7.7□□□□□ -1.18
CSPG4P13-202ENST00000567704 DNAH14Q0VDD8 3507 aa7.7□□□□□ -1.18
CSPG4P13-202ENST00000567704 C9orf92A6NGG3 77 aa7.7□□□□□ -1.18
CSPG4P13-202ENST00000567704 LINC00472Q9H8W2 130 aa7.69□□□□□ -1.18
CSPG4P13-202ENST00000567704 A0A0D9SG42 100 aa7.69□□□□□ -1.18
CSPG4P13-202ENST00000567704 DMXL1Q9Y485 3027 aa7.69□□□□□ -1.18
CSPG4P13-202ENST00000567704 TEX15Q9BXT5 2789 aa7.67□□□□□ -1.18
CSPG4P13-202ENST00000567704 CSAG1Q6PB30 78 aa7.67□□□□□ -1.18
CSPG4P13-202ENST00000567704 COL6A5A8TX70 2615 aa7.66□□□□□ -1.18
CSPG4P13-202ENST00000567704 FRYLO94915 3013 aa7.65□□□□□ -1.18
CSPG4P13-202ENST00000567704 DMXL2Q8TDJ6 3036 aa7.64□□□□□ -1.19
CSPG4P13-202ENST00000567704 LINC00304Q8N9R0 145 aa7.64□□□□□ -1.19
CSPG4P13-202ENST00000567704 TNP2Q05952 138 aa7.63□□□□□ -1.19
CSPG4P13-202ENST00000567704 ITPR1Q14643 2758 aa7.63□□□□□ -1.19
CSPG4P13-202ENST00000567704 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
CSPG4P13-202ENST00000567704 A0A1B0GU33 70 aa7.62□□□□□ -1.19
CSPG4P13-202ENST00000567704 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.61□□□□□ -1.19
CSPG4P13-202ENST00000567704 KRTAP26-1Q6PEX3 210 aa7.59□□□□□ -1.19
CSPG4P13-202ENST00000567704 BAHCC1Q9P281 2608 aa7.59□□□□□ -1.19
CSPG4P13-202ENST00000567704 ASH1LQ9NR48 2969 aaKnown RBP7.59□□□□□ -1.19
CSPG4P13-202ENST00000567704 STAB1Q9NY15 2570 aa7.59□□□□□ -1.2
CSPG4P13-202ENST00000567704 SPRR1BP22528 89 aa7.58□□□□□ -1.2
CSPG4P13-202ENST00000567704 ADGRG4Q8IZF6 3080 aa7.58□□□□□ -1.2
CSPG4P13-202ENST00000567704 UBR5O95071 2799 aaPredicted RBP7.56□□□□□ -1.2
CSPG4P13-202ENST00000567704 Q5W150 140 aa7.56□□□□□ -1.2
CSPG4P13-202ENST00000567704 KRTAP29-1A8MX34 341 aaPredicted RBP7.55□□□□□ -1.2
CSPG4P13-202ENST00000567704 DMBT1Q9UGM3 2413 aaPredicted RBP7.55□□□□□ -1.2
CSPG4P13-202ENST00000567704 TEP1Q99973 2627 aaKnown RBP7.55□□□□□ -1.2
CSPG4P13-202ENST00000567704 FLNCQ14315 2725 aa7.55□□□□□ -1.2
CSPG4P13-202ENST00000567704 WWC2-AS2Q96NR7 200 aa7.54□□□□□ -1.2
CSPG4P13-202ENST00000567704 SETXQ7Z333 2677 aaKnown RBP7.53□□□□□ -1.2
CSPG4P13-202ENST00000567704 A8MU10 97 aa7.52□□□□□ -1.21
CSPG4P13-202ENST00000567704 KRTAP4-16G5E9R7 235 aaPredicted RBP7.52□□□□□ -1.21
CSPG4P13-202ENST00000567704 TACC2O95359 2948 aa7.52□□□□□ -1.21
CSPG4P13-202ENST00000567704 BOD1L1Q8NFC6 3051 aa7.51□□□□□ -1.21
CSPG4P13-202ENST00000567704 FLG2Q5D862 2391 aaPredicted RBP7.51□□□□□ -1.21
CSPG4P13-202ENST00000567704 SMR3BP02814 79 aaPredicted RBP7.51□□□□□ -1.21
CSPG4P13-202ENST00000567704 MYO15AQ9UKN7 3530 aa7.51□□□□□ -1.21
CSPG4P13-202ENST00000567704 MUC3AQ02505 3323 aa7.49□□□□□ -1.21
CSPG4P13-202ENST00000567704 USP34Q70CQ2 3546 aa7.48□□□□□ -1.21
CSPG4P13-202ENST00000567704 A6NN06 94 aa7.48□□□□□ -1.21
CSPG4P13-202ENST00000567704 LRBAP50851 2863 aa7.47□□□□□ -1.21
CSPG4P13-202ENST00000567704 Q6ZR54 194 aa7.47□□□□□ -1.21
CSPG4P13-202ENST00000567704 ATMQ13315 3056 aa7.46□□□□□ -1.21
CSPG4P13-202ENST00000567704 CFAP47Q6ZTR5 3102 aa7.46□□□□□ -1.22
CSPG4P13-202ENST00000567704 LCE6AA0A183 80 aa7.45□□□□□ -1.22
CSPG4P13-202ENST00000567704 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
CSPG4P13-202ENST00000567704 SPEGQ15772 3267 aa7.44□□□□□ -1.22
CSPG4P13-202ENST00000567704 KRTAP1-5Q9BYS1 174 aa7.44□□□□□ -1.22
CSPG4P13-202ENST00000567704 STAB2Q8WWQ8 2551 aa7.42□□□□□ -1.22
CSPG4P13-202ENST00000567704 LUZP6Q538Z0 58 aa7.4□□□□□ -1.22
CSPG4P13-202ENST00000567704 COL12A1Q99715 3063 aa7.39□□□□□ -1.23
CSPG4P13-202ENST00000567704 NSD1Q96L73 2696 aaPredicted RBP7.39□□□□□ -1.23
CSPG4P13-202ENST00000567704 PLAC8Q9NZF1 115 aa7.39□□□□□ -1.23
CSPG4P13-202ENST00000567704 ADM2Q7Z4H4 148 aa7.38□□□□□ -1.23
CSPG4P13-202ENST00000567704 ASB16-AS1Q495Z4 193 aa7.38□□□□□ -1.23
CSPG4P13-202ENST00000567704 KMT2BQ9UMN6 2715 aaPredicted RBP7.37□□□□□ -1.23
CSPG4P13-202ENST00000567704 A0A087X002 238 aa7.37□□□□□ -1.23
CSPG4P13-202ENST00000567704 NOTCH2NLQ7Z3S9 236 aa7.37□□□□□ -1.23
CSPG4P13-202ENST00000567704 SPATA8Q6RVD6 105 aa7.36□□□□□ -1.23
CSPG4P13-202ENST00000567704 APCP25054 2843 aa7.35□□□□□ -1.23
CSPG4P13-202ENST00000567704 LOC400499M0QZD8 3231 aa7.34□□□□□ -1.23
CSPG4P13-202ENST00000567704 ZZEF1O43149 2961 aa7.33□□□□□ -1.24
CSPG4P13-202ENST00000567704 DMDP11532 3685 aa7.33□□□□□ -1.24
CSPG4P13-202ENST00000567704 PANO1I0J062 215 aa7.32□□□□□ -1.24
CSPG4P13-202ENST00000567704 ITPR2Q14571 2701 aa7.31□□□□□ -1.24
CSPG4P13-202ENST00000567704 J3QL48 77 aa7.31□□□□□ -1.24
CSPG4P13-202ENST00000567704 LINC00483Q53H64 154 aa7.3□□□□□ -1.24
CSPG4P13-202ENST00000567704 KRTAP7-1Q8IUC3 87 aa7.29□□□□□ -1.24
CSPG4P13-202ENST00000567704 UTP20O75691 2785 aaKnown RBP7.29□□□□□ -1.24
CSPG4P13-202ENST00000567704 ROMO1P60602 79 aa7.29□□□□□ -1.24
CSPG4P13-202ENST00000567704 RPL37P61927 97 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms