RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 C15orf56Q8N910 161 aa1.83□□□□□ -2.12
CHD9-218ENST00000566029 ATRQ13535 2644 aa1.83□□□□□ -2.12
CHD9-218ENST00000566029 COL6A5A8TX70 2615 aa1.83□□□□□ -2.12
CHD9-218ENST00000566029 ZNF861PO60384 105 aa1.83□□□□□ -2.12
CHD9-218ENST00000566029 A0A1B0GU33 70 aa1.82□□□□□ -2.12
CHD9-218ENST00000566029 SPRR1AP35321 89 aa1.82□□□□□ -2.12
CHD9-218ENST00000566029 LINC00304Q8N9R0 145 aa1.82□□□□□ -2.12
CHD9-218ENST00000566029 FAM168BA1KXE4 195 aa1.82□□□□□ -2.12
CHD9-218ENST00000566029 C9orf92A6NGG3 77 aa1.82□□□□□ -2.12
CHD9-218ENST00000566029 SPRR1BP22528 89 aa1.82□□□□□ -2.12
CHD9-218ENST00000566029 SPATA8Q6RVD6 105 aa1.82□□□□□ -2.12
CHD9-218ENST00000566029 MRPL34Q9BQ48 92 aaKnown RBP1.81□□□□□ -2.12
CHD9-218ENST00000566029 INE1O15225 51 aa1.81□□□□□ -2.12
CHD9-218ENST00000566029 Q6ZR54 194 aa1.81□□□□□ -2.12
CHD9-218ENST00000566029 TYMSOSQ8TAI1 123 aa1.81□□□□□ -2.12
CHD9-218ENST00000566029 MGAM2Q2M2H8 2515 aa1.81□□□□□ -2.12
CHD9-218ENST00000566029 STAB1Q9NY15 2570 aa1.81□□□□□ -2.12
CHD9-218ENST00000566029 A8MUU9 505 aa1.8□□□□□ -2.12
CHD9-218ENST00000566029 KRTAP7-1Q8IUC3 87 aa1.8□□□□□ -2.12
CHD9-218ENST00000566029 CHD6Q8TD26 2715 aa1.8□□□□□ -2.12
CHD9-218ENST00000566029 RTL8CO15255 209 aa1.8□□□□□ -2.12
CHD9-218ENST00000566029 Q8N1X5 172 aa1.8□□□□□ -2.12
CHD9-218ENST00000566029 AKAP13Q12802 2813 aa1.79□□□□□ -2.12
CHD9-218ENST00000566029 KRTAP25-1Q3LHN0 102 aa1.79□□□□□ -2.12
CHD9-218ENST00000566029 UNC79Q9P2D8 2635 aa1.79□□□□□ -2.12
CHD9-218ENST00000566029 APCP25054 2843 aa1.79□□□□□ -2.12
CHD9-218ENST00000566029 LINC00472Q9H8W2 130 aa1.79□□□□□ -2.12
CHD9-218ENST00000566029 M0QZ58 72 aa1.79□□□□□ -2.12
CHD9-218ENST00000566029 FLNBO75369 2602 aaKnown RBP1.78□□□□□ -2.12
CHD9-218ENST00000566029 IGFL1Q6UW32 110 aa1.78□□□□□ -2.12
CHD9-218ENST00000566029 Q6ZSA8 131 aa1.77□□□□□ -2.13
CHD9-218ENST00000566029 Q96NJ1 140 aa1.77□□□□□ -2.13
CHD9-218ENST00000566029 A0A1B0GVX0 72 aa1.77□□□□□ -2.13
CHD9-218ENST00000566029 C20orf166-AS1Q96NR2 134 aa1.77□□□□□ -2.13
CHD9-218ENST00000566029 KRTAP13-3Q3SY46 172 aa1.77□□□□□ -2.13
CHD9-218ENST00000566029 HECTD1Q9ULT8 2610 aa1.76□□□□□ -2.13
CHD9-218ENST00000566029 HTTP42858 3142 aa1.75□□□□□ -2.13
CHD9-218ENST00000566029 SETXQ7Z333 2677 aaKnown RBP1.75□□□□□ -2.13
CHD9-218ENST00000566029 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.75□□□□□ -2.13
CHD9-218ENST00000566029 CHD9Q3L8U1 2897 aa1.75□□□□□ -2.13
CHD9-218ENST00000566029 NIPBLQ6KC79 2804 aaeCLIP1.75□□□□□ -2.131e-5■□□□□ 11.1
CHD9-218ENST00000566029 PRO2289Q9P1D8 64 aa1.75□□□□□ -2.13
CHD9-218ENST00000566029 MUC3AQ02505 3323 aa1.75□□□□□ -2.13
CHD9-218ENST00000566029 GOLGB1Q14789 3259 aaKnown RBP1.75□□□□□ -2.13
CHD9-218ENST00000566029 BAHCC1Q9P281 2608 aa1.74□□□□□ -2.13
CHD9-218ENST00000566029 TEX15Q9BXT5 2789 aa1.73□□□□□ -2.13
CHD9-218ENST00000566029 UBR5O95071 2799 aaPredicted RBP1.73□□□□□ -2.13
CHD9-218ENST00000566029 UTP20O75691 2785 aaKnown RBP1.73□□□□□ -2.13
CHD9-218ENST00000566029 Q5W150 140 aa1.73□□□□□ -2.13
CHD9-218ENST00000566029 PLAC4Q8WY50 150 aa1.73□□□□□ -2.13
CHD9-218ENST00000566029 PCNTO95613 3336 aa1.72□□□□□ -2.13
CHD9-218ENST00000566029 A0A087WTM6 91 aa1.72□□□□□ -2.13
CHD9-218ENST00000566029 TNRC18O15417 2968 aaPredicted RBP1.72□□□□□ -2.13
CHD9-218ENST00000566029 DSPP15924 2871 aaKnown RBP1.72□□□□□ -2.13
CHD9-218ENST00000566029 FRYLO94915 3013 aa1.72□□□□□ -2.13
CHD9-218ENST00000566029 MGAQ8IWI9 3026 aa1.72□□□□□ -2.13
CHD9-218ENST00000566029 NOTCH1P46531 2555 aa1.72□□□□□ -2.13
CHD9-218ENST00000566029 Q5VSD8 79 aa1.72□□□□□ -2.13
CHD9-218ENST00000566029 RPL37P61927 97 aaKnown RBP1.72□□□□□ -2.13
CHD9-218ENST00000566029 STAB2Q8WWQ8 2551 aa1.71□□□□□ -2.14
CHD9-218ENST00000566029 DMBT1Q9UGM3 2413 aaPredicted RBP1.71□□□□□ -2.14
CHD9-218ENST00000566029 DNAH12Q6ZR08 3092 aa1.71□□□□□ -2.14
CHD9-218ENST00000566029 LCE2DQ5TA82 110 aaPredicted RBP1.71□□□□□ -2.14
CHD9-218ENST00000566029 KRTAP13-1Q8IUC0 172 aa1.7□□□□□ -2.14
CHD9-218ENST00000566029 KRTAP10-3P60369 221 aa1.7□□□□□ -2.14
CHD9-218ENST00000566029 ITPR1Q14643 2758 aa1.7□□□□□ -2.14
CHD9-218ENST00000566029 K7EIL1 84 aa1.7□□□□□ -2.14
CHD9-218ENST00000566029 IGSF10Q6WRI0 2623 aa1.7□□□□□ -2.14
CHD9-218ENST00000566029 P0C880 135 aa1.7□□□□□ -2.14
CHD9-218ENST00000566029 FRYQ5TBA9 3013 aa1.7□□□□□ -2.14
CHD9-218ENST00000566029 H1FX-AS1Q4G0G2 97 aa1.7□□□□□ -2.14
CHD9-218ENST00000566029 RYR1P21817 5038 aa1.69□□□□□ -2.14
CHD9-218ENST00000566029 TPRXLQ17RH7 258 aa1.69□□□□□ -2.14
CHD9-218ENST00000566029 R4GN34 69 aa1.69□□□□□ -2.14
CHD9-218ENST00000566029 KRTAP11-1Q8IUC1 163 aa1.69□□□□□ -2.14
CHD9-218ENST00000566029 CHD7Q9P2D1 2997 aa1.69□□□□□ -2.14
CHD9-218ENST00000566029 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
CHD9-218ENST00000566029 KRTAP10-9P60411 292 aa1.68□□□□□ -2.14
CHD9-218ENST00000566029 AKAP9Q99996 3911 aa1.68□□□□□ -2.14
CHD9-218ENST00000566029 KRTAP1-1Q07627 177 aa1.68□□□□□ -2.14
CHD9-218ENST00000566029 KRTAP1-3Q8IUG1 177 aa1.67□□□□□ -2.14
CHD9-218ENST00000566029 TNP1P09430 55 aa1.67□□□□□ -2.14
CHD9-218ENST00000566029 A0A0C4DFX4 3053 aa1.67□□□□□ -2.14
CHD9-218ENST00000566029 S4R3F8 94 aa1.67□□□□□ -2.14
CHD9-218ENST00000566029 CENPFP49454 3210 aa1.66□□□□□ -2.14
CHD9-218ENST00000566029 PANO1I0J062 215 aa1.66□□□□□ -2.14
CHD9-218ENST00000566029 MXRA5Q9NR99 2828 aa1.65□□□□□ -2.14
CHD9-218ENST00000566029 NBEAL2Q6ZNJ1 2754 aa1.65□□□□□ -2.15
CHD9-218ENST00000566029 BRCA2P51587 3418 aa1.65□□□□□ -2.15
CHD9-218ENST00000566029 RANBP2P49792 3224 aaKnown RBP1.65□□□□□ -2.15
CHD9-218ENST00000566029 FLNCQ14315 2725 aa1.65□□□□□ -2.15
CHD9-218ENST00000566029 KRTAP24-1Q3LI83 254 aa1.65□□□□□ -2.15
CHD9-218ENST00000566029 USP34Q70CQ2 3546 aa1.64□□□□□ -2.15
CHD9-218ENST00000566029 H0YAA0 97 aa1.64□□□□□ -2.15
CHD9-218ENST00000566029 LCE2CQ5TA81 110 aa1.64□□□□□ -2.15
CHD9-218ENST00000566029 M0R2T5 61 aa1.63□□□□□ -2.15
CHD9-218ENST00000566029 SMR3AQ99954 134 aa1.63□□□□□ -2.15
CHD9-218ENST00000566029 NBEAQ8NFP9 2946 aa1.63□□□□□ -2.15
CHD9-218ENST00000566029 LCE2BO14633 110 aa1.62□□□□□ -2.15
CHD9-218ENST00000566029 KRTAP1-5Q9BYS1 174 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms