RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SNCGO76070 127 aa5.03□□□□□ -1.6
VPS9D1-205ENST00000565452 BVES-AS1Q5T3Y7 98 aa5.03□□□□□ -1.6
VPS9D1-205ENST00000565452 XP32Q5T750 250 aa5.03□□□□□ -1.6
VPS9D1-205ENST00000565452 H0YGX0 51 aa5.02□□□□□ -1.61
VPS9D1-205ENST00000565452 M0R143 59 aa5.02□□□□□ -1.61
VPS9D1-205ENST00000565452 SLC25A20O43772 301 aa5.02□□□□□ -1.61
VPS9D1-205ENST00000565452 FXYD2P54710 66 aa5.02□□□□□ -1.61
VPS9D1-205ENST00000565452 C3orf22Q8N5N4 141 aa5.02□□□□□ -1.61
VPS9D1-205ENST00000565452 IGLV8-61A0A075B6I0 122 aa5.01□□□□□ -1.61
VPS9D1-205ENST00000565452 Q9BRP9 147 aa5.01□□□□□ -1.61
VPS9D1-205ENST00000565452 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
VPS9D1-205ENST00000565452 SPINK1P00995 79 aa5□□□□□ -1.61
VPS9D1-205ENST00000565452 SPRR4Q96PI1 79 aa5□□□□□ -1.61
VPS9D1-205ENST00000565452 COX6CP09669 75 aa4.99□□□□□ -1.61
VPS9D1-205ENST00000565452 A0A1B0GX51 115 aa4.98□□□□□ -1.61
VPS9D1-205ENST00000565452 GHRHP01286 108 aa4.98□□□□□ -1.61
VPS9D1-205ENST00000565452 Q1RN00 199 aa4.98□□□□□ -1.61
VPS9D1-205ENST00000565452 LINC00483Q53H64 154 aa4.98□□□□□ -1.61
VPS9D1-205ENST00000565452 LINC00575Q6W349 94 aa4.98□□□□□ -1.61
VPS9D1-205ENST00000565452 hADV29S1A0JD25 119 aa4.97□□□□□ -1.61
VPS9D1-205ENST00000565452 H7C2G1 150 aa4.97□□□□□ -1.61
VPS9D1-205ENST00000565452 ERC2-IT1O76042 136 aa4.97□□□□□ -1.61
VPS9D1-205ENST00000565452 SPRR1BP22528 89 aa4.97□□□□□ -1.61
VPS9D1-205ENST00000565452 OCIAD2Q56VL3 154 aa4.97□□□□□ -1.61
VPS9D1-205ENST00000565452 PCOTHQ58A44 107 aa4.97□□□□□ -1.61
VPS9D1-205ENST00000565452 COX6B2Q6YFQ2 88 aa4.97□□□□□ -1.61
VPS9D1-205ENST00000565452 TEX49A0A1B0GTD5 131 aa4.96□□□□□ -1.62
VPS9D1-205ENST00000565452 GAGE2AQ6NT46 116 aa4.96□□□□□ -1.62
VPS9D1-205ENST00000565452 SSBP3-AS1Q7Z2R9 100 aa4.96□□□□□ -1.62
VPS9D1-205ENST00000565452 PPDPFLQ8WWR9 84 aa4.96□□□□□ -1.62
VPS9D1-205ENST00000565452 MACF1Q9UPN3 7388 aaKnown RBP4.95□□□□□ -1.62
VPS9D1-205ENST00000565452 H3BQ85 93 aa4.95□□□□□ -1.62
VPS9D1-205ENST00000565452 PSMB2P49721 201 aa4.95□□□□□ -1.62
VPS9D1-205ENST00000565452 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.95□□□□□ -1.62
VPS9D1-205ENST00000565452 Q8NBF4 154 aa4.95□□□□□ -1.62
VPS9D1-205ENST00000565452 FLGP20930 4061 aaPredicted RBP4.94□□□□□ -1.62
VPS9D1-205ENST00000565452 IGLV5-48A0A075B6I7 105 aa4.94□□□□□ -1.62
VPS9D1-205ENST00000565452 LAMTOR3Q9UHA4 124 aa4.94□□□□□ -1.62
VPS9D1-205ENST00000565452 TRIAP1O43715 76 aa4.93□□□□□ -1.62
VPS9D1-205ENST00000565452 K7ERJ3 54 aa4.92□□□□□ -1.62
VPS9D1-205ENST00000565452 SCGB1C2P0DMR2 95 aa4.92□□□□□ -1.62
VPS9D1-205ENST00000565452 ST20-AS1Q8NBB2 130 aa4.92□□□□□ -1.62
VPS9D1-205ENST00000565452 RPS29P62273 56 aaKnown RBP4.91□□□□□ -1.62
VPS9D1-205ENST00000565452 LYRM7Q5U5X0 104 aa4.91□□□□□ -1.62
VPS9D1-205ENST00000565452 Q6ZQY7 126 aa4.91□□□□□ -1.62
VPS9D1-205ENST00000565452 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
VPS9D1-205ENST00000565452 Q8N377 158 aa4.91□□□□□ -1.62
VPS9D1-205ENST00000565452 DEFB105AQ8NG35 78 aa4.91□□□□□ -1.62
VPS9D1-205ENST00000565452 DNAL4O96015 105 aa4.9□□□□□ -1.63
VPS9D1-205ENST00000565452 TRACP01848 142 aa4.89□□□□□ -1.63
VPS9D1-205ENST00000565452 BATFQ16520 125 aa4.89□□□□□ -1.63
VPS9D1-205ENST00000565452 SNHG12Q9BXW3 62 aa4.89□□□□□ -1.63
VPS9D1-205ENST00000565452 TRBV20-1A0A075B6N2 111 aa4.88□□□□□ -1.63
VPS9D1-205ENST00000565452 IGLV9-49A0A0B4J1Y8 123 aa4.88□□□□□ -1.63
VPS9D1-205ENST00000565452 F8WEM9 126 aa4.88□□□□□ -1.63
VPS9D1-205ENST00000565452 TMEM256-PLSCR3K7ERE1 68 aa4.88□□□□□ -1.63
VPS9D1-205ENST00000565452 SMIM29Q86T20 159 aa4.88□□□□□ -1.63
VPS9D1-205ENST00000565452 FAM218AQ96MZ4 157 aa4.88□□□□□ -1.63
VPS9D1-205ENST00000565452 LINC00846Q9NV44 126 aa4.88□□□□□ -1.63
VPS9D1-205ENST00000565452 C9orf118A6NHY6 69 aa4.87□□□□□ -1.63
VPS9D1-205ENST00000565452 LST1O00453 97 aa4.87□□□□□ -1.63
VPS9D1-205ENST00000565452 CD164Q04900 197 aa4.87□□□□□ -1.63
VPS9D1-205ENST00000565452 MOBPQ13875 183 aa4.87□□□□□ -1.63
VPS9D1-205ENST00000565452 C9orf153Q5TBE3 101 aa4.87□□□□□ -1.63
VPS9D1-205ENST00000565452 Q6JHZ5 121 aa4.87□□□□□ -1.63
VPS9D1-205ENST00000565452 CLEC2BQ92478 149 aa4.87□□□□□ -1.63
VPS9D1-205ENST00000565452 ORMDL1Q9P0S3 153 aa4.87□□□□□ -1.63
VPS9D1-205ENST00000565452 ATXN8Q156A1 80 aa4.86□□□□□ -1.63
VPS9D1-205ENST00000565452 COL5A1-AS1Q5SY13 56 aa4.86□□□□□ -1.63
VPS9D1-205ENST00000565452 TAX1BP3O14907 124 aa4.85□□□□□ -1.63
VPS9D1-205ENST00000565452 H3BUT2 72 aa4.84□□□□□ -1.63
VPS9D1-205ENST00000565452 NDUFV3P56181 108 aaKnown RBP4.84□□□□□ -1.63
VPS9D1-205ENST00000565452 UBE2V1Q13404 147 aa4.84□□□□□ -1.63
VPS9D1-205ENST00000565452 PCP4L1A6NKN8 68 aa4.83□□□□□ -1.64
VPS9D1-205ENST00000565452 TCL1BO95988 128 aa4.83□□□□□ -1.64
VPS9D1-205ENST00000565452 FABP2P12104 132 aa4.83□□□□□ -1.64
VPS9D1-205ENST00000565452 A0A1W2PPM0 123 aa4.82□□□□□ -1.64
VPS9D1-205ENST00000565452 C9orf92A6NGG3 77 aa4.82□□□□□ -1.64
VPS9D1-205ENST00000565452 BAALC-AS2P0C853 105 aa4.82□□□□□ -1.64
VPS9D1-205ENST00000565452 KRTAP6-3Q3LI67 103 aa4.82□□□□□ -1.64
VPS9D1-205ENST00000565452 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
VPS9D1-205ENST00000565452 H3BMG7 143 aa4.81□□□□□ -1.64
VPS9D1-205ENST00000565452 Q5XG85 94 aa4.81□□□□□ -1.64
VPS9D1-205ENST00000565452 NAA38Q9BRA0 125 aaKnown RBP4.81□□□□□ -1.64
VPS9D1-205ENST00000565452 LIMD2Q9BT23 127 aa4.81□□□□□ -1.64
VPS9D1-205ENST00000565452 Q6Q795 121 aa4.8□□□□□ -1.64
VPS9D1-205ENST00000565452 JMJD7-PLA2G4BH0Y9G9 81 aa4.79□□□□□ -1.64
VPS9D1-205ENST00000565452 C21orf62-AS1Q17RA5 79 aa4.79□□□□□ -1.64
VPS9D1-205ENST00000565452 IGFL1Q6UW32 110 aa4.79□□□□□ -1.64
VPS9D1-205ENST00000565452 TEN1Q86WV5 123 aa4.79□□□□□ -1.64
VPS9D1-205ENST00000565452 RBM3P98179 157 aaKnown RBP4.78□□□□□ -1.64
VPS9D1-205ENST00000565452 ANKRD29Q8N6D5 301 aa4.78□□□□□ -1.64
VPS9D1-205ENST00000565452 C9JAW5 83 aa4.77□□□□□ -1.65
VPS9D1-205ENST00000565452 H3BT86 120 aa4.77□□□□□ -1.65
VPS9D1-205ENST00000565452 PDE6GP18545 87 aa4.77□□□□□ -1.65
VPS9D1-205ENST00000565452 DSCR8Q96T75 97 aa4.77□□□□□ -1.65
VPS9D1-205ENST00000565452 SPCS1Q9Y6A9 102 aa4.77□□□□□ -1.65
VPS9D1-205ENST00000565452 TRBV7-7A0A0K0K1E9 115 aa4.76□□□□□ -1.65
VPS9D1-205ENST00000565452 LCE2BO14633 110 aa4.76□□□□□ -1.65
VPS9D1-205ENST00000565452 HRCT1Q6UXD1 115 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms