RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 NDUFA1O15239 70 aa2.96□□□□□ -1.94
TUBGCP4-209ENST00000564511 SLC25A20O43772 301 aa2.96□□□□□ -1.94
TUBGCP4-209ENST00000564511 TSHBP01222 138 aa2.96□□□□□ -1.94
TUBGCP4-209ENST00000564511 TLX1NBP0CAT3 122 aa2.96□□□□□ -1.94
TUBGCP4-209ENST00000564511 ZC2HC1BQ5TFG8 222 aa2.96□□□□□ -1.94
TUBGCP4-209ENST00000564511 UNQ6190/PRO20217Q6UXQ8 127 aa2.96□□□□□ -1.94
TUBGCP4-209ENST00000564511 LINC01561Q8N1V8 128 aa2.96□□□□□ -1.94
TUBGCP4-209ENST00000564511 LINC00337Q8N6G1 96 aa2.96□□□□□ -1.94
TUBGCP4-209ENST00000564511 LINC00304Q8N9R0 145 aa2.96□□□□□ -1.94
TUBGCP4-209ENST00000564511 DSCR8Q96T75 97 aa2.96□□□□□ -1.94
TUBGCP4-209ENST00000564511 IGLV9-49A0A0B4J1Y8 123 aa2.95□□□□□ -1.94
TUBGCP4-209ENST00000564511 H3BT86 120 aa2.95□□□□□ -1.94
TUBGCP4-209ENST00000564511 RPL28P46779 137 aaKnown RBP2.95□□□□□ -1.94
TUBGCP4-209ENST00000564511 KRTAP13-2Q52LG2 175 aa2.95□□□□□ -1.94
TUBGCP4-209ENST00000564511 CENPWQ5EE01 88 aa2.95□□□□□ -1.94
TUBGCP4-209ENST00000564511 KRTAP4-1Q9BYQ7 146 aa2.95□□□□□ -1.94
TUBGCP4-209ENST00000564511 C6orf48Q9UBA6 75 aa2.95□□□□□ -1.94
TUBGCP4-209ENST00000564511 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 TRBV6-5A0A0K0K1A5 114 aa2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 TCL1BO95988 128 aa2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 HBBP68871 147 aa2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 MRPS36P82909 103 aaKnown RBP2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 ATXN8Q156A1 80 aa2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 ASB16-AS1Q495Z4 193 aa2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 C9orf129Q5T035 196 aaKnown RBP2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 LINC00643Q86TS7 51 aa2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 C11orf52Q96A22 123 aa2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 IFI27L1Q96BM0 104 aa2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 CNFNQ9BYD5 112 aa2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 C22orf24Q9Y442 160 aa2.94□□□□□ -1.94
TUBGCP4-209ENST00000564511 IGKV2D-26A0A0A0MRZ7 120 aa2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 IGHV3OR16-9A0A0B4J2B5 98 aa2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 TRBV27A0A0K0K1C4 114 aa2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 LINC01549A6NIU2 74 aa2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 POLR2KP53803 58 aaKnown RBP2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 ORMDL2Q53FV1 153 aa2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 LINC00242Q5T6M2 205 aa2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 C2orf82Q6UX34 121 aa2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 PRR15Q8IV56 129 aa2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 PCP2Q8IVA1 136 aa2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 SERP2Q8N6R1 65 aa2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 UBE2D4Q9Y2X8 147 aa2.93□□□□□ -1.94
TUBGCP4-209ENST00000564511 TRBV20OR9-2A0A075B6H5 130 aa2.92□□□□□ -1.94
TUBGCP4-209ENST00000564511 BCE1O60756 84 aa2.92□□□□□ -1.94
TUBGCP4-209ENST00000564511 LGALS3P17931 250 aaKnown RBP2.92□□□□□ -1.94
TUBGCP4-209ENST00000564511 ATP5EP56381 51 aaPredicted RBP2.92□□□□□ -1.94
TUBGCP4-209ENST00000564511 FAM229BQ4G0N7 80 aa2.92□□□□□ -1.94
TUBGCP4-209ENST00000564511 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
TUBGCP4-209ENST00000564511 TRBV30A0A0K0K1B3 111 aa2.91□□□□□ -1.94
TUBGCP4-209ENST00000564511 TRBV10-2A0A0K0K1G8 114 aa2.91□□□□□ -1.94
TUBGCP4-209ENST00000564511 HBDP02042 147 aa2.91□□□□□ -1.94
TUBGCP4-209ENST00000564511 KIAA0087Q14695 138 aa2.91□□□□□ -1.94
TUBGCP4-209ENST00000564511 XAGE1AQ9HD64 81 aa2.91□□□□□ -1.94
TUBGCP4-209ENST00000564511 USH2AO75445 5202 aa2.91□□□□□ -1.94
TUBGCP4-209ENST00000564511 FCGBPQ9Y6R7 5405 aaPredicted RBP2.9□□□□□ -1.95
TUBGCP4-209ENST00000564511 A0A0B4J2C4 111 aa2.9□□□□□ -1.95
TUBGCP4-209ENST00000564511 A0A1B0GXF2 115 aa2.9□□□□□ -1.95
TUBGCP4-209ENST00000564511 RPL37AP8A6NKH3 93 aa2.9□□□□□ -1.95
TUBGCP4-209ENST00000564511 UBE2AP49459 152 aa2.9□□□□□ -1.95
TUBGCP4-209ENST00000564511 RIGQ13278 110 aa2.9□□□□□ -1.95
TUBGCP4-209ENST00000564511 KRTAP13-3Q3SY46 172 aa2.9□□□□□ -1.95
TUBGCP4-209ENST00000564511 FP248Q71RG6 208 aaPredicted RBP2.9□□□□□ -1.95
TUBGCP4-209ENST00000564511 NOTCH2NLQ7Z3S9 236 aa2.9□□□□□ -1.95
TUBGCP4-209ENST00000564511 TIMM21Q9BVV7 248 aa2.9□□□□□ -1.95
TUBGCP4-209ENST00000564511 TRBV7-6A0A0J9YX20 115 aa2.89□□□□□ -1.95
TUBGCP4-209ENST00000564511 HIGD1CA8MV81 97 aa2.89□□□□□ -1.95
TUBGCP4-209ENST00000564511 SMKR1H3BMG3 65 aa2.89□□□□□ -1.95
TUBGCP4-209ENST00000564511 NDUFS5O43920 106 aa2.89□□□□□ -1.95
TUBGCP4-209ENST00000564511 RPL39P62891 51 aaKnown RBP2.89□□□□□ -1.95
TUBGCP4-209ENST00000564511 MT1HP80294 61 aa2.89□□□□□ -1.95
TUBGCP4-209ENST00000564511 Q1RN00 199 aa2.89□□□□□ -1.95
TUBGCP4-209ENST00000564511 FAM104BQ5XKR9 115 aa2.89□□□□□ -1.95
TUBGCP4-209ENST00000564511 LINC00167Q96N53 147 aa2.89□□□□□ -1.95
TUBGCP4-209ENST00000564511 TIMM17BO60830 172 aa2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 PPP1R17O96001 155 aa2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 COX6CP09669 75 aa2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 IFI27P40305 119 aaPredicted RBP2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 RBM3P98179 157 aaKnown RBP2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 SPAG11AQ6PDA7 123 aa2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 SCGB1D4Q6XE38 83 aa2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 FAM104AQ969W3 186 aa2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 TOMM7Q9P0U1 55 aa2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 RBM12B-AS1Q9P1G2 102 aa2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 PRO1854Q9UHT4 67 aa2.88□□□□□ -1.95
TUBGCP4-209ENST00000564511 TEX49A0A1B0GTD5 131 aa2.87□□□□□ -1.95
TUBGCP4-209ENST00000564511 A0A1B0GUT8 65 aa2.87□□□□□ -1.95
TUBGCP4-209ENST00000564511 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
TUBGCP4-209ENST00000564511 SMIM1B2RUZ4 78 aa2.87□□□□□ -1.95
TUBGCP4-209ENST00000564511 PLNP26678 52 aa2.87□□□□□ -1.95
TUBGCP4-209ENST00000564511 CKS2P33552 79 aa2.87□□□□□ -1.95
TUBGCP4-209ENST00000564511 HIST1H4AP62805 103 aaKnown RBP2.87□□□□□ -1.95
TUBGCP4-209ENST00000564511 KRTAP19-2Q3LHN2 52 aa2.87□□□□□ -1.95
TUBGCP4-209ENST00000564511 SFTA2Q6UW10 78 aa2.87□□□□□ -1.95
TUBGCP4-209ENST00000564511 KRTAP13-1Q8IUC0 172 aa2.87□□□□□ -1.95
TUBGCP4-209ENST00000564511 IGKV2-28A0A075B6P5 120 aa2.86□□□□□ -1.95
TUBGCP4-209ENST00000564511 K7EMI3 77 aa2.86□□□□□ -1.95
TUBGCP4-209ENST00000564511 M0R2T5 61 aa2.86□□□□□ -1.95
TUBGCP4-209ENST00000564511 NDUFC1O43677 76 aa2.86□□□□□ -1.95
TUBGCP4-209ENST00000564511 IGKV2D-28P01615 120 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms