RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ATRQ13535 2644 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 BRCA2P51587 3418 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 LCE6AA0A183 80 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 TMEM263Q8WUH6 116 aaKnown RBP0.82□□□□□ -2.28
CHD9-209ENST00000564255 SMIM4Q8WVI0 70 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 SMR3AQ99954 134 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 KRTAP2-1Q9BYU5 128 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 KNTC1P50748 2209 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 CHD7Q9P2D1 2997 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 LINC01549A6NIU2 74 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 PIN1P1O15428 100 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 KRTAP10-4P60372 401 aaPredicted RBP0.82□□□□□ -2.28
CHD9-209ENST00000564255 RTTNQ86VV8 2226 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 DMXL1Q9Y485 3027 aa0.81□□□□□ -2.28
CHD9-209ENST00000564255 TRBV30A0A0K0K1B3 111 aa0.81□□□□□ -2.28
CHD9-209ENST00000564255 NREPQ16612 68 aa0.81□□□□□ -2.28
CHD9-209ENST00000564255 BPTFQ12830 3046 aa0.81□□□□□ -2.28
CHD9-209ENST00000564255 NF1P21359 2839 aa0.81□□□□□ -2.28
CHD9-209ENST00000564255 MUC2Q02817 5179 aa0.81□□□□□ -2.28
CHD9-209ENST00000564255 ACYP2P14621 99 aa0.81□□□□□ -2.28
CHD9-209ENST00000564255 CAV3P56539 151 aa0.81□□□□□ -2.28
CHD9-209ENST00000564255 C10orf113Q5VZT2 155 aa0.81□□□□□ -2.28
CHD9-209ENST00000564255 NCBP2-AS2Q69YL0 99 aa0.81□□□□□ -2.28
CHD9-209ENST00000564255 Q6ZQY7 126 aa0.81□□□□□ -2.28
CHD9-209ENST00000564255 OTOGQ6ZRI0 2925 aa0.8□□□□□ -2.28
CHD9-209ENST00000564255 GOLGA4Q13439 2230 aaKnown RBP0.8□□□□□ -2.28
CHD9-209ENST00000564255 ABCA4P78363 2273 aa0.8□□□□□ -2.28
CHD9-209ENST00000564255 TRAV21A0A0B4J279 112 aa0.8□□□□□ -2.28
CHD9-209ENST00000564255 SPTY2D1-AS1A0A0U1RR47 76 aa0.8□□□□□ -2.28
CHD9-209ENST00000564255 CCL19Q99731 98 aa0.8□□□□□ -2.28
CHD9-209ENST00000564255 STAB1Q9NY15 2570 aa0.8□□□□□ -2.28
CHD9-209ENST00000564255 SPEGQ15772 3267 aa0.8□□□□□ -2.28
CHD9-209ENST00000564255 WDR87Q6ZQQ6 2873 aa0.8□□□□□ -2.28
CHD9-209ENST00000564255 TFF3Q07654 80 aa0.8□□□□□ -2.28
CHD9-209ENST00000564255 C10orf99Q6UWK7 81 aa0.8□□□□□ -2.28
CHD9-209ENST00000564255 NCOA6Q14686 2063 aaPredicted RBP0.8□□□□□ -2.28
CHD9-209ENST00000564255 TRBV6-1A0A0K0K1D8 114 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 TOMM5Q8N4H5 51 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 WFDC9Q8NEX5 89 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 ALPK2Q86TB3 2170 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 DSPP15924 2871 aaKnown RBP0.79□□□□□ -2.28
CHD9-209ENST00000564255 LINC00959A0A1B0GUT2 108 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 PDZD2O15018 2839 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 AKAP13Q12802 2813 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 ITPR2Q14571 2701 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 FREM1Q5H8C1 2179 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 ZZEF1O43149 2961 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 COL6A5A8TX70 2615 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 CDH23Q9H251 3354 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 DNAJC13O75165 2243 aa0.79□□□□□ -2.28
CHD9-209ENST00000564255 DEFB133Q30KQ1 61 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 NMES1Q9C002 83 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 NBEAL1Q6ZS30 2694 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 HERC2O95714 4834 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 A0A096LNT2 108 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 G3V318 75 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 DEFB112Q30KQ8 113 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 ENHOQ6UWT2 76 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 SMIM11BQ8TCY0 68 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 CMC2Q9NRP2 79 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 ACANP16112 2415 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 EPPK1P58107 5090 aaKnown RBP0.78□□□□□ -2.28
CHD9-209ENST00000564255 FRYQ5TBA9 3013 aa0.78□□□□□ -2.28
CHD9-209ENST00000564255 DNAH14Q0VDD8 3507 aa0.78□□□□□ -2.29
CHD9-209ENST00000564255 A0A1B0GU69 56 aa0.78□□□□□ -2.29
CHD9-209ENST00000564255 GAFA1Q96PS6 74 aa0.78□□□□□ -2.29
CHD9-209ENST00000564255 UBL5Q9BZL1 73 aa0.78□□□□□ -2.29
CHD9-209ENST00000564255 KALRNO60229 2985 aa0.78□□□□□ -2.29
CHD9-209ENST00000564255 FCGBPQ9Y6R7 5405 aaPredicted RBP0.77□□□□□ -2.29
CHD9-209ENST00000564255 FLNAP21333 2647 aaKnown RBP0.77□□□□□ -2.29
CHD9-209ENST00000564255 WDFY4Q6ZS81 3184 aa0.77□□□□□ -2.29
CHD9-209ENST00000564255 PLAC4Q8WY50 150 aa0.77□□□□□ -2.29
CHD9-209ENST00000564255 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.77□□□□□ -2.292e-6■■■■□ 23
CHD9-209ENST00000564255 GVQW2A0A096LPI5 108 aaPredicted RBP0.77□□□□□ -2.29
CHD9-209ENST00000564255 NCR3O14931 201 aa0.77□□□□□ -2.29
CHD9-209ENST00000564255 PRH1P02810 166 aa0.77□□□□□ -2.29
CHD9-209ENST00000564255 Q6ZRX8 168 aa0.77□□□□□ -2.29
CHD9-209ENST00000564255 INTS1Q8N201 2190 aaKnown RBP0.77□□□□□ -2.29
CHD9-209ENST00000564255 APCP25054 2843 aa0.77□□□□□ -2.29
CHD9-209ENST00000564255 DMXL2Q8TDJ6 3036 aa0.77□□□□□ -2.29
CHD9-209ENST00000564255 KMT2AQ03164 3969 aa0.77□□□□□ -2.29
CHD9-209ENST00000564255 FSIP2Q5CZC0 6907 aa0.76□□□□□ -2.29
CHD9-209ENST00000564255 WNK1Q9H4A3 2382 aa0.76□□□□□ -2.29
CHD9-209ENST00000564255 K7EMI3 77 aa0.76□□□□□ -2.29
CHD9-209ENST00000564255 NDUFA4O00483 81 aa0.76□□□□□ -2.29
CHD9-209ENST00000564255 STATHP02808 62 aa0.76□□□□□ -2.29
CHD9-209ENST00000564255 TLN2Q9Y4G6 2542 aa0.76□□□□□ -2.29
CHD9-209ENST00000564255 DYNC2H1Q8NCM8 4307 aaKnown RBP0.76□□□□□ -2.29
CHD9-209ENST00000564255 COX7BP24311 80 aa0.76□□□□□ -2.29
CHD9-209ENST00000564255 FCER1GP30273 86 aa0.76□□□□□ -2.29
CHD9-209ENST00000564255 LINC00575Q6W349 94 aa0.76□□□□□ -2.29
CHD9-209ENST00000564255 KMT2CQ8NEZ4 4911 aaKnown RBP0.76□□□□□ -2.29
CHD9-209ENST00000564255 MGAM2Q2M2H8 2515 aa0.75□□□□□ -2.29
CHD9-209ENST00000564255 NSD1Q96L73 2696 aaPredicted RBP0.75□□□□□ -2.29
CHD9-209ENST00000564255 LY6G6CO95867 125 aa0.75□□□□□ -2.29
CHD9-209ENST00000564255 HAMPP81172 84 aa0.75□□□□□ -2.29
CHD9-209ENST00000564255 NBEAQ8NFP9 2946 aa0.75□□□□□ -2.29
CHD9-209ENST00000564255 CELSR2Q9HCU4 2923 aa0.75□□□□□ -2.29
CHD9-209ENST00000564255 PKDREJQ9NTG1 2253 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms