RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 LCE6AA0A183 80 aa6.75□□□□□ -1.33
RNF40-204ENST00000563683 C16orf90A8MZG2 172 aa6.75□□□□□ -1.33
RNF40-204ENST00000563683 PMAIP1Q13794 54 aa6.74□□□□□ -1.33
RNF40-204ENST00000563683 C1orf64Q8NEQ6 169 aa6.74□□□□□ -1.33
RNF40-204ENST00000563683 HCG22E2RYF7 251 aa6.74□□□□□ -1.33
RNF40-204ENST00000563683 STAB2Q8WWQ8 2551 aa6.73□□□□□ -1.33
RNF40-204ENST00000563683 CASC2Q6XLA1 102 aa6.73□□□□□ -1.33
RNF40-204ENST00000563683 IGLV5-52A0A0A0MRZ9 124 aa6.73□□□□□ -1.33
RNF40-204ENST00000563683 RPL37AP61513 92 aaKnown RBP6.72□□□□□ -1.33
RNF40-204ENST00000563683 C1orf134Q5TEV5 83 aa6.71□□□□□ -1.34
RNF40-204ENST00000563683 NBDYA0A0U1RRE5 68 aa6.71□□□□□ -1.34
RNF40-204ENST00000563683 CYP4F30PQ9H0H9 118 aa6.71□□□□□ -1.34
RNF40-204ENST00000563683 ZCCHC13Q8WW36 166 aaKnown RBP6.71□□□□□ -1.34
RNF40-204ENST00000563683 OTOGQ6ZRI0 2925 aa6.7□□□□□ -1.34
RNF40-204ENST00000563683 K7EQZ3 153 aa6.7□□□□□ -1.34
RNF40-204ENST00000563683 TLX1NBP0CAT3 122 aa6.7□□□□□ -1.34
RNF40-204ENST00000563683 IGHV6-1A0A0B4J1U7 121 aa6.7□□□□□ -1.34
RNF40-204ENST00000563683 CIRBP-AS1Q8TBR5 109 aa6.69□□□□□ -1.34
RNF40-204ENST00000563683 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
RNF40-204ENST00000563683 A0A1W2PNM2 257 aa6.69□□□□□ -1.34
RNF40-204ENST00000563683 PSPHP1O15172 72 aa6.68□□□□□ -1.34
RNF40-204ENST00000563683 TRAV22A0A0B4J277 110 aa6.68□□□□□ -1.34
RNF40-204ENST00000563683 PDZD2O15018 2839 aa6.67□□□□□ -1.34
RNF40-204ENST00000563683 IGFL1Q6UW32 110 aa6.67□□□□□ -1.34
RNF40-204ENST00000563683 KRTAP26-1Q6PEX3 210 aa6.67□□□□□ -1.34
RNF40-204ENST00000563683 SPRR4Q96PI1 79 aa6.67□□□□□ -1.34
RNF40-204ENST00000563683 FBN1P35555 2871 aaKnown RBP6.67□□□□□ -1.34
RNF40-204ENST00000563683 H0Y9P7 68 aa6.66□□□□□ -1.34
RNF40-204ENST00000563683 PCOTHQ58A44 107 aa6.66□□□□□ -1.34
RNF40-204ENST00000563683 DSCR10P59022 87 aa6.66□□□□□ -1.34
RNF40-204ENST00000563683 PLA2G2DQ9UNK4 145 aa6.66□□□□□ -1.34
RNF40-204ENST00000563683 TENM3Q9P273 2699 aa6.65□□□□□ -1.34
RNF40-204ENST00000563683 MOBPQ13875 183 aa6.65□□□□□ -1.35
RNF40-204ENST00000563683 TNP2Q05952 138 aa6.64□□□□□ -1.35
RNF40-204ENST00000563683 CHKB-CPT1BH3BT56 60 aa6.63□□□□□ -1.35
RNF40-204ENST00000563683 C9orf163Q8N9P6 203 aa6.62□□□□□ -1.35
RNF40-204ENST00000563683 RTL8CO15255 209 aa6.61□□□□□ -1.35
RNF40-204ENST00000563683 A8MUN3 132 aa6.61□□□□□ -1.35
RNF40-204ENST00000563683 LIMD2Q9BT23 127 aa6.61□□□□□ -1.35
RNF40-204ENST00000563683 APLNQ9ULZ1 77 aa6.61□□□□□ -1.35
RNF40-204ENST00000563683 H3BPC8 53 aa6.6□□□□□ -1.35
RNF40-204ENST00000563683 SPRR1AP35321 89 aa6.59□□□□□ -1.35
RNF40-204ENST00000563683 SPANXA2-OT1Q8N9U9 137 aa6.59□□□□□ -1.35
RNF40-204ENST00000563683 SPTSSBQ8NFR3 76 aa6.59□□□□□ -1.35
RNF40-204ENST00000563683 ANAPC11Q9NYG5 84 aa6.59□□□□□ -1.35
RNF40-204ENST00000563683 CD164Q04900 197 aa6.59□□□□□ -1.36
RNF40-204ENST00000563683 RETNLBQ9BQ08 111 aa6.59□□□□□ -1.36
RNF40-204ENST00000563683 IGLV5-37A0A075B6J1 123 aa6.58□□□□□ -1.36
RNF40-204ENST00000563683 KRTAP4-16G5E9R7 235 aaPredicted RBP6.58□□□□□ -1.36
RNF40-204ENST00000563683 KRTAP1-5Q9BYS1 174 aa6.58□□□□□ -1.36
RNF40-204ENST00000563683 CNBPP62633 177 aaKnown RBP6.58□□□□□ -1.36
RNF40-204ENST00000563683 AKAP9Q99996 3911 aa6.56□□□□□ -1.36
RNF40-204ENST00000563683 Q5VV11 94 aa6.56□□□□□ -1.36
RNF40-204ENST00000563683 PKD1L1Q8TDX9 2849 aa6.55□□□□□ -1.36
RNF40-204ENST00000563683 A0A087WTM6 91 aa6.54□□□□□ -1.36
RNF40-204ENST00000563683 A8MWP4 228 aa6.54□□□□□ -1.36
RNF40-204ENST00000563683 Q8N9P0 234 aaPredicted RBP6.53□□□□□ -1.36
RNF40-204ENST00000563683 PRR15LQ9BU68 103 aa6.53□□□□□ -1.36
RNF40-204ENST00000563683 A6NED7 52 aa6.53□□□□□ -1.36
RNF40-204ENST00000563683 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
RNF40-204ENST00000563683 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
RNF40-204ENST00000563683 ATP11AUNQ6ZP68 121 aa6.5□□□□□ -1.37
RNF40-204ENST00000563683 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.5□□□□□ -1.37
RNF40-204ENST00000563683 KRTAP29-1A8MX34 341 aaPredicted RBP6.49□□□□□ -1.37
RNF40-204ENST00000563683 WWC2-AS2Q96NR7 200 aa6.49□□□□□ -1.37
RNF40-204ENST00000563683 IGLV8-61A0A075B6I0 122 aa6.49□□□□□ -1.37
RNF40-204ENST00000563683 Q75L30 129 aa6.48□□□□□ -1.37
RNF40-204ENST00000563683 ZNF861PO60384 105 aa6.48□□□□□ -1.37
RNF40-204ENST00000563683 SPACA4Q8TDM5 124 aa6.48□□□□□ -1.37
RNF40-204ENST00000563683 TRRAPQ9Y4A5 3859 aa6.47□□□□□ -1.37
RNF40-204ENST00000563683 TP53AIP1Q9HCN2 124 aa6.47□□□□□ -1.37
RNF40-204ENST00000563683 ZNF469Q96JG9 3925 aaPredicted RBP6.47□□□□□ -1.37
RNF40-204ENST00000563683 LOC101927531A0A1B0GV80 90 aa6.45□□□□□ -1.38
RNF40-204ENST00000563683 COA5Q86WW8 74 aa6.45□□□□□ -1.38
RNF40-204ENST00000563683 A8MU10 97 aa6.45□□□□□ -1.38
RNF40-204ENST00000563683 KRTAP7-1Q8IUC3 87 aa6.44□□□□□ -1.38
RNF40-204ENST00000563683 C8orf17Q9NRJ1 99 aa6.44□□□□□ -1.38
RNF40-204ENST00000563683 IGLV7-46A0A075B6I9 117 aa6.44□□□□□ -1.38
RNF40-204ENST00000563683 SPAG11AQ6PDA7 123 aa6.43□□□□□ -1.38
RNF40-204ENST00000563683 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
RNF40-204ENST00000563683 IGKV2D-30A0A075B6S6 120 aa6.42□□□□□ -1.38
RNF40-204ENST00000563683 IGKV2-30P06310 120 aa6.42□□□□□ -1.38
RNF40-204ENST00000563683 MRPL34Q9BQ48 92 aaKnown RBP6.42□□□□□ -1.38
RNF40-204ENST00000563683 PANO1I0J062 215 aa6.42□□□□□ -1.38
RNF40-204ENST00000563683 LCA10Q71F78 164 aa6.41□□□□□ -1.38
RNF40-204ENST00000563683 RBM12B-AS1Q9P1G2 102 aa6.41□□□□□ -1.38
RNF40-204ENST00000563683 TENM2Q9NT68 2774 aa6.41□□□□□ -1.38
RNF40-204ENST00000563683 A0A1B0GVX0 72 aa6.4□□□□□ -1.38
RNF40-204ENST00000563683 LINC00313P59037 77 aa6.4□□□□□ -1.39
RNF40-204ENST00000563683 LINC00472Q9H8W2 130 aa6.4□□□□□ -1.39
RNF40-204ENST00000563683 IGLV7-43P04211 117 aa6.39□□□□□ -1.39
RNF40-204ENST00000563683 SPINK1P00995 79 aa6.39□□□□□ -1.39
RNF40-204ENST00000563683 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
RNF40-204ENST00000563683 LINC01558Q9Y6Z2 57 aa6.38□□□□□ -1.39
RNF40-204ENST00000563683 A6NN06 94 aa6.38□□□□□ -1.39
RNF40-204ENST00000563683 PLA2G1BP04054 148 aaKnown RBP6.36□□□□□ -1.39
RNF40-204ENST00000563683 C7orf65Q6ZTY9 151 aa6.36□□□□□ -1.39
RNF40-204ENST00000563683 SPRR1BP22528 89 aa6.36□□□□□ -1.39
RNF40-204ENST00000563683 MMP24-AS1A0A0U1RRL7 71 aa6.36□□□□□ -1.39
RNF40-204ENST00000563683 TYMSOSQ8TAI1 123 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms