RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 LIMD2Q9BT23 127 aa15.76■□□□□ 0.11
NME3-203ENST00000563367 A0A0B4J2C4 111 aa15.75■□□□□ 0.11
NME3-203ENST00000563367 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.69■□□□□ 0.1
NME3-203ENST00000563367 FXYD2P54710 66 aa15.68■□□□□ 0.1
NME3-203ENST00000563367 F8WEM9 126 aa15.66■□□□□ 0.1
NME3-203ENST00000563367 Q5XG85 94 aa15.64■□□□□ 0.09
NME3-203ENST00000563367 PRO1854Q9UHT4 67 aa15.64■□□□□ 0.09
NME3-203ENST00000563367 TMEM238LA0A1B0GVL6 79 aa15.63■□□□□ 0.09
NME3-203ENST00000563367 A6NJY4 79 aa15.63■□□□□ 0.09
NME3-203ENST00000563367 FAM218AQ96MZ4 157 aa15.62■□□□□ 0.09
NME3-203ENST00000563367 IGLV8-61A0A075B6I0 122 aa15.6■□□□□ 0.09
NME3-203ENST00000563367 H0YGX0 51 aa15.6■□□□□ 0.09
NME3-203ENST00000563367 PPDPFLQ8WWR9 84 aa15.59■□□□□ 0.09
NME3-203ENST00000563367 HSD52Q0P140 79 aa15.58■□□□□ 0.08
NME3-203ENST00000563367 ASB16-AS1Q495Z4 193 aa15.58■□□□□ 0.08
NME3-203ENST00000563367 OCIAD2Q56VL3 154 aa15.58■□□□□ 0.08
NME3-203ENST00000563367 C1orf195Q5TG92 126 aa15.57■□□□□ 0.08
NME3-203ENST00000563367 XP32Q5T750 250 aa15.56■□□□□ 0.08
NME3-203ENST00000563367 Q6JHZ5 121 aa15.56■□□□□ 0.08
NME3-203ENST00000563367 IGFL1Q6UW32 110 aa15.56■□□□□ 0.08
NME3-203ENST00000563367 SNHG12Q9BXW3 62 aa15.55■□□□□ 0.08
NME3-203ENST00000563367 CLEC2BQ92478 149 aa15.53■□□□□ 0.08
NME3-203ENST00000563367 UQCR10Q9UDW1 63 aa15.53■□□□□ 0.08
NME3-203ENST00000563367 A0A0U1RQV1 116 aa15.51■□□□□ 0.07
NME3-203ENST00000563367 TRIAP1O43715 76 aa15.51■□□□□ 0.07
NME3-203ENST00000563367 SNCGO76070 127 aa15.51■□□□□ 0.07
NME3-203ENST00000563367 C9orf92A6NGG3 77 aa15.5■□□□□ 0.07
NME3-203ENST00000563367 K7ERJ3 54 aa15.5■□□□□ 0.07
NME3-203ENST00000563367 SEC61BP60468 96 aaKnown RBP15.5■□□□□ 0.07
NME3-203ENST00000563367 H3BUT2 72 aa15.49■□□□□ 0.07
NME3-203ENST00000563367 TCL1BO95988 128 aa15.47■□□□□ 0.07
NME3-203ENST00000563367 TRBV7-7A0A0K0K1E9 115 aa15.46■□□□□ 0.07
NME3-203ENST00000563367 KRTAP4-1Q9BYQ7 146 aa15.46■□□□□ 0.07
NME3-203ENST00000563367 A0A1B0GX51 115 aa15.45■□□□□ 0.06
NME3-203ENST00000563367 FAT4Q6V0I7 4981 aa15.44■□□□□ 0.06
NME3-203ENST00000563367 NDUFV3P56181 108 aaKnown RBP15.42■□□□□ 0.06
NME3-203ENST00000563367 PSMB2P49721 201 aa15.38■□□□□ 0.05
NME3-203ENST00000563367 FABP2P12104 132 aa15.35■□□□□ 0.05
NME3-203ENST00000563367 H3BMG7 143 aa15.32■□□□□ 0.04
NME3-203ENST00000563367 GHRHP01286 108 aa15.32■□□□□ 0.04
NME3-203ENST00000563367 COX6CP09669 75 aa15.3■□□□□ 0.04
NME3-203ENST00000563367 LCE2AQ5TA79 106 aaPredicted RBP15.3■□□□□ 0.04
NME3-203ENST00000563367 Q6Q795 121 aa15.3■□□□□ 0.04
NME3-203ENST00000563367 PCOTHQ58A44 107 aa15.28■□□□□ 0.04
NME3-203ENST00000563367 DNAL4O96015 105 aa15.27■□□□□ 0.04
NME3-203ENST00000563367 TEN1Q86WV5 123 aa15.26■□□□□ 0.03
NME3-203ENST00000563367 ORMDL1Q9P0S3 153 aa15.26■□□□□ 0.03
NME3-203ENST00000563367 LST1O00453 97 aa15.23■□□□□ 0.03
NME3-203ENST00000563367 SMIM6P0DI80 62 aa15.2■□□□□ 0.02
NME3-203ENST00000563367 A0A087WSZ3 146 aa15.18■□□□□ 0.02
NME3-203ENST00000563367 A0A1W2PNM2 257 aa15.18■□□□□ 0.02
NME3-203ENST00000563367 H3BQ85 93 aa15.18■□□□□ 0.02
NME3-203ENST00000563367 RPL37P61927 97 aaKnown RBP15.18■□□□□ 0.02
NME3-203ENST00000563367 SS18L2Q9UHA2 77 aa15.18■□□□□ 0.02
NME3-203ENST00000563367 A0A1B0GV72 72 aa15.17■□□□□ 0.02
NME3-203ENST00000563367 TMEM256-PLSCR3K7ERE1 68 aa15.17■□□□□ 0.02
NME3-203ENST00000563367 SCGB1C2P0DMR2 95 aa15.17■□□□□ 0.02
NME3-203ENST00000563367 TRACP01848 142 aa15.14■□□□□ 0.01
NME3-203ENST00000563367 ANKRD29Q8N6D5 301 aa15.13■□□□□ 0.01
NME3-203ENST00000563367 M0R143 59 aa15.12■□□□□ 0.01
NME3-203ENST00000563367 UBE2V1Q13404 147 aa15.1■□□□□ 0.01
NME3-203ENST00000563367 OBSCN-AS1Q96MR7 158 aa15.1■□□□□ 0.01
NME3-203ENST00000563367 Q96NJ1 140 aa15.1■□□□□ 0.01
NME3-203ENST00000563367 NAA38Q9BRA0 125 aaKnown RBP15.06■□□□□ 0
NME3-203ENST00000563367 TRBV7-4A0A0J9YYF1 115 aa15.05■□□□□ -0
NME3-203ENST00000563367 LOC105371267A0A1B0GV96 52 aa15.04■□□□□ -0
NME3-203ENST00000563367 KRTAP19-2Q3LHN2 52 aa15.02■□□□□ -0
NME3-203ENST00000563367 LCE2CQ5TA81 110 aa15□□□□□ -0.01
NME3-203ENST00000563367 CCKP06307 115 aa14.99□□□□□ -0.01
NME3-203ENST00000563367 BAALC-AS2P0C853 105 aa14.99□□□□□ -0.01
NME3-203ENST00000563367 TSTD3H0UI37 97 aa14.97□□□□□ -0.01
NME3-203ENST00000563367 Q75L30 129 aa14.97□□□□□ -0.01
NME3-203ENST00000563367 RBM3P98179 157 aaKnown RBP14.95□□□□□ -0.02
NME3-203ENST00000563367 ATXN8Q156A1 80 aa14.92□□□□□ -0.02
NME3-203ENST00000563367 SIGMAR1Q99720 223 aa14.92□□□□□ -0.02
NME3-203ENST00000563367 IGKV4-1P06312 121 aa14.89□□□□□ -0.03
NME3-203ENST00000563367 BATFQ16520 125 aa14.89□□□□□ -0.03
NME3-203ENST00000563367 DSCR8Q96T75 97 aa14.89□□□□□ -0.03
NME3-203ENST00000563367 VPS25Q9BRG1 176 aa14.89□□□□□ -0.03
NME3-203ENST00000563367 DSCR10P59022 87 aa14.88□□□□□ -0.03
NME3-203ENST00000563367 LINC00472Q9H8W2 130 aa14.88□□□□□ -0.03
NME3-203ENST00000563367 DEFB116Q30KQ4 102 aa14.87□□□□□ -0.03
NME3-203ENST00000563367 ATP11AUNQ6ZP68 121 aa14.87□□□□□ -0.03
NME3-203ENST00000563367 C20orf166-AS1Q96NR2 134 aa14.86□□□□□ -0.03
NME3-203ENST00000563367 A8MUU9 505 aa14.83□□□□□ -0.04
NME3-203ENST00000563367 C9JAW5 83 aa14.82□□□□□ -0.04
NME3-203ENST00000563367 LINC00313P59037 77 aa14.78□□□□□ -0.04
NME3-203ENST00000563367 MT1HP80294 61 aa14.78□□□□□ -0.04
NME3-203ENST00000563367 LYRM7Q5U5X0 104 aa14.77□□□□□ -0.05
NME3-203ENST00000563367 NOTCH2NLQ7Z3S9 236 aa14.77□□□□□ -0.05
NME3-203ENST00000563367 KRTAP9-2Q9BYQ4 174 aa14.75□□□□□ -0.05
NME3-203ENST00000563367 TRBV20-1A0A075B6N2 111 aa14.74□□□□□ -0.05
NME3-203ENST00000563367 KRTAP16-1A8MUX0 517 aa14.74□□□□□ -0.05
NME3-203ENST00000563367 JMJD7-PLA2G4BH0Y9G9 81 aa14.74□□□□□ -0.05
NME3-203ENST00000563367 Q6ZQT0 140 aa14.73□□□□□ -0.05
NME3-203ENST00000563367 C9orf118A6NHY6 69 aa14.71□□□□□ -0.05
NME3-203ENST00000563367 TAX1BP3O14907 124 aa14.71□□□□□ -0.05
NME3-203ENST00000563367 LOC110117498A0A087WWA1 95 aa14.7□□□□□ -0.06
NME3-203ENST00000563367 IGHV6-1A0A0B4J1U7 121 aa14.7□□□□□ -0.06
NME3-203ENST00000563367 C21orf62-AS1Q17RA5 79 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms