RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PPDPFLQ8WWR9 84 aa9.08□□□□□ -0.96
USB1-208ENST00000563207 IGLV9-49A0A0B4J1Y8 123 aa9.07□□□□□ -0.96
USB1-208ENST00000563207 GHRHP01286 108 aa9.07□□□□□ -0.96
USB1-208ENST00000563207 LINC00304Q8N9R0 145 aa9.07□□□□□ -0.96
USB1-208ENST00000563207 RETNLBQ9BQ08 111 aa9.07□□□□□ -0.96
USB1-208ENST00000563207 MOBPQ13875 183 aa9.06□□□□□ -0.96
USB1-208ENST00000563207 Q8N377 158 aa9.06□□□□□ -0.96
USB1-208ENST00000563207 C4orf48Q5BLP8 95 aa9.05□□□□□ -0.96
USB1-208ENST00000563207 Q8NBF4 154 aa9.05□□□□□ -0.96
USB1-208ENST00000563207 C9orf153Q5TBE3 101 aa9.04□□□□□ -0.96
USB1-208ENST00000563207 FAM218AQ96MZ4 157 aa9.04□□□□□ -0.96
USB1-208ENST00000563207 SCGB1C2P0DMR2 95 aa9.03□□□□□ -0.96
USB1-208ENST00000563207 SMIM29Q86T20 159 aa9.03□□□□□ -0.96
USB1-208ENST00000563207 H3BQ85 93 aa9.02□□□□□ -0.97
USB1-208ENST00000563207 DNAL4O96015 105 aa9.01□□□□□ -0.97
USB1-208ENST00000563207 SPINK1P00995 79 aa9.01□□□□□ -0.97
USB1-208ENST00000563207 BATFQ16520 125 aa9.01□□□□□ -0.97
USB1-208ENST00000563207 CLEC2BQ92478 149 aa9.01□□□□□ -0.97
USB1-208ENST00000563207 F8WEM9 126 aa9□□□□□ -0.97
USB1-208ENST00000563207 SNHG12Q9BXW3 62 aa8.99□□□□□ -0.97
USB1-208ENST00000563207 TRACP01848 142 aa8.98□□□□□ -0.97
USB1-208ENST00000563207 RPS29P62273 56 aaKnown RBP8.98□□□□□ -0.97
USB1-208ENST00000563207 LYRM7Q5U5X0 104 aa8.98□□□□□ -0.97
USB1-208ENST00000563207 LST1O00453 97 aa8.97□□□□□ -0.97
USB1-208ENST00000563207 ORMDL1Q9P0S3 153 aa8.96□□□□□ -0.98
USB1-208ENST00000563207 IGLV8-61A0A075B6I0 122 aa8.95□□□□□ -0.98
USB1-208ENST00000563207 CD164Q04900 197 aa8.95□□□□□ -0.98
USB1-208ENST00000563207 TMEM256-PLSCR3K7ERE1 68 aa8.94□□□□□ -0.98
USB1-208ENST00000563207 Q6JHZ5 121 aa8.94□□□□□ -0.98
USB1-208ENST00000563207 TRBV20-1A0A075B6N2 111 aa8.92□□□□□ -0.98
USB1-208ENST00000563207 C9orf118A6NHY6 69 aa8.92□□□□□ -0.98
USB1-208ENST00000563207 FABP2P12104 132 aa8.92□□□□□ -0.98
USB1-208ENST00000563207 NDUFV3P56181 108 aaKnown RBP8.92□□□□□ -0.98
USB1-208ENST00000563207 ATXN8Q156A1 80 aa8.92□□□□□ -0.98
USB1-208ENST00000563207 MUC17Q685J3 4493 aa8.92□□□□□ -0.98
USB1-208ENST00000563207 H3BUT2 72 aa8.91□□□□□ -0.98
USB1-208ENST00000563207 TAX1BP3O14907 124 aa8.91□□□□□ -0.98
USB1-208ENST00000563207 NAA38Q9BRA0 125 aaKnown RBP8.91□□□□□ -0.98
USB1-208ENST00000563207 FAT4Q6V0I7 4981 aa8.9□□□□□ -0.98
USB1-208ENST00000563207 IGLV7-46A0A075B6I9 117 aa8.89□□□□□ -0.99
USB1-208ENST00000563207 TCL1BO95988 128 aa8.89□□□□□ -0.99
USB1-208ENST00000563207 COL5A1-AS1Q5SY13 56 aa8.89□□□□□ -0.99
USB1-208ENST00000563207 LIMD2Q9BT23 127 aa8.89□□□□□ -0.99
USB1-208ENST00000563207 UBE2V1Q13404 147 aa8.88□□□□□ -0.99
USB1-208ENST00000563207 H3BMG7 143 aa8.87□□□□□ -0.99
USB1-208ENST00000563207 A0A1W2PPM0 123 aa8.86□□□□□ -0.99
USB1-208ENST00000563207 PCP4L1A6NKN8 68 aa8.86□□□□□ -0.99
USB1-208ENST00000563207 Q5XG85 94 aa8.86□□□□□ -0.99
USB1-208ENST00000563207 IGFL1Q6UW32 110 aa8.86□□□□□ -0.99
USB1-208ENST00000563207 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
USB1-208ENST00000563207 TPRXLQ17RH7 258 aa8.85□□□□□ -0.99
USB1-208ENST00000563207 HRCT1Q6UXD1 115 aa8.85□□□□□ -0.99
USB1-208ENST00000563207 BAALC-AS2P0C853 105 aa8.84□□□□□ -0.99
USB1-208ENST00000563207 LCE2AQ5TA79 106 aaPredicted RBP8.84□□□□□ -0.99
USB1-208ENST00000563207 FP248Q71RG6 208 aaPredicted RBP8.84□□□□□ -0.99
USB1-208ENST00000563207 Q6Q795 121 aa8.82□□□□□ -1
USB1-208ENST00000563207 A0A0G2JQZ4 141 aa8.81□□□□□ -1
USB1-208ENST00000563207 ANKRD29Q8N6D5 301 aa8.81□□□□□ -1
USB1-208ENST00000563207 TEN1Q86WV5 123 aa8.8□□□□□ -1
USB1-208ENST00000563207 TRBV7-7A0A0K0K1E9 115 aa8.79□□□□□ -1
USB1-208ENST00000563207 A0A0U1RQV1 116 aa8.79□□□□□ -1
USB1-208ENST00000563207 RBM3P98179 157 aaKnown RBP8.78□□□□□ -1
USB1-208ENST00000563207 KRTAP9-2Q9BYQ4 174 aa8.78□□□□□ -1
USB1-208ENST00000563207 C9JAW5 83 aa8.77□□□□□ -1.01
USB1-208ENST00000563207 JMJD7-PLA2G4BH0Y9G9 81 aa8.76□□□□□ -1.01
USB1-208ENST00000563207 ASB16-AS1Q495Z4 193 aa8.76□□□□□ -1.01
USB1-208ENST00000563207 SPCS1Q9Y6A9 102 aa8.76□□□□□ -1.01
USB1-208ENST00000563207 KRTAP13-3Q3SY46 172 aa8.75□□□□□ -1.01
USB1-208ENST00000563207 DSCR8Q96T75 97 aa8.75□□□□□ -1.01
USB1-208ENST00000563207 TRBV7-4A0A0J9YYF1 115 aa8.74□□□□□ -1.01
USB1-208ENST00000563207 H3BT86 120 aa8.74□□□□□ -1.01
USB1-208ENST00000563207 SS18L2Q9UHA2 77 aa8.74□□□□□ -1.01
USB1-208ENST00000563207 KRTAP4-1Q9BYQ7 146 aa8.73□□□□□ -1.01
USB1-208ENST00000563207 A0A1B0GV72 72 aa8.71□□□□□ -1.02
USB1-208ENST00000563207 A0A1W2PNM2 257 aa8.71□□□□□ -1.02
USB1-208ENST00000563207 PDE6GP18545 87 aa8.71□□□□□ -1.02
USB1-208ENST00000563207 C1orf195Q5TG92 126 aa8.71□□□□□ -1.02
USB1-208ENST00000563207 CCKP06307 115 aa8.7□□□□□ -1.02
USB1-208ENST00000563207 C21orf62-AS1Q17RA5 79 aa8.69□□□□□ -1.02
USB1-208ENST00000563207 A0A087WSZ3 146 aa8.68□□□□□ -1.02
USB1-208ENST00000563207 K7EP34 96 aa8.68□□□□□ -1.02
USB1-208ENST00000563207 GTF2H5Q6ZYL4 71 aa8.68□□□□□ -1.02
USB1-208ENST00000563207 OBSCN-AS1Q96MR7 158 aa8.68□□□□□ -1.02
USB1-208ENST00000563207 LOC110117498A0A087WWA1 95 aa8.66□□□□□ -1.02
USB1-208ENST00000563207 A0A1B0GW54 56 aa8.66□□□□□ -1.02
USB1-208ENST00000563207 Q6ZQT0 140 aa8.63□□□□□ -1.03
USB1-208ENST00000563207 MTURNQ8N3F0 131 aa8.63□□□□□ -1.03
USB1-208ENST00000563207 VPS25Q9BRG1 176 aa8.63□□□□□ -1.03
USB1-208ENST00000563207 C14orf132Q9NPU4 83 aa8.61□□□□□ -1.03
USB1-208ENST00000563207 PRO0461Q9UI25 63 aa8.59□□□□□ -1.03
USB1-208ENST00000563207 F8W1H4 67 aa8.58□□□□□ -1.04
USB1-208ENST00000563207 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
USB1-208ENST00000563207 Q96NJ1 140 aa8.57□□□□□ -1.04
USB1-208ENST00000563207 XP32Q5T750 250 aa8.56□□□□□ -1.04
USB1-208ENST00000563207 SEC61BP60468 96 aaKnown RBP8.55□□□□□ -1.04
USB1-208ENST00000563207 LINC00472Q9H8W2 130 aa8.54□□□□□ -1.04
USB1-208ENST00000563207 C9orf92A6NGG3 77 aa8.51□□□□□ -1.05
USB1-208ENST00000563207 IGKV4-1P06312 121 aa8.51□□□□□ -1.05
USB1-208ENST00000563207 KRTAP9-6A0A140TA67 174 aa8.5□□□□□ -1.05
USB1-208ENST00000563207 J3KT08 172 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms