RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 SCGB1C2P0DMR2 95 aa9.52□□□□□ -0.89
USB1-206ENST00000562534 Q8NBF4 154 aa9.52□□□□□ -0.89
USB1-206ENST00000562534 FAM218AQ96MZ4 157 aa9.52□□□□□ -0.89
USB1-206ENST00000562534 SMIM29Q86T20 159 aa9.51□□□□□ -0.89
USB1-206ENST00000562534 BATFQ16520 125 aa9.49□□□□□ -0.89
USB1-206ENST00000562534 SPINK1P00995 79 aa9.48□□□□□ -0.89
USB1-206ENST00000562534 CLEC2BQ92478 149 aa9.48□□□□□ -0.89
USB1-206ENST00000562534 SNHG12Q9BXW3 62 aa9.48□□□□□ -0.89
USB1-206ENST00000562534 HERC1Q15751 4861 aa9.47□□□□□ -0.89
USB1-206ENST00000562534 F8WEM9 126 aa9.46□□□□□ -0.9
USB1-206ENST00000562534 DNAL4O96015 105 aa9.46□□□□□ -0.9
USB1-206ENST00000562534 H3BQ85 93 aa9.45□□□□□ -0.9
USB1-206ENST00000562534 TRACP01848 142 aa9.43□□□□□ -0.9
USB1-206ENST00000562534 RPS29P62273 56 aaKnown RBP9.42□□□□□ -0.9
USB1-206ENST00000562534 LST1O00453 97 aa9.41□□□□□ -0.9
USB1-206ENST00000562534 CD164Q04900 197 aa9.41□□□□□ -0.9
USB1-206ENST00000562534 ORMDL1Q9P0S3 153 aa9.41□□□□□ -0.9
USB1-206ENST00000562534 IGLV8-61A0A075B6I0 122 aa9.4□□□□□ -0.9
USB1-206ENST00000562534 TMEM256-PLSCR3K7ERE1 68 aa9.4□□□□□ -0.9
USB1-206ENST00000562534 FABP2P12104 132 aa9.4□□□□□ -0.9
USB1-206ENST00000562534 NDUFV3P56181 108 aaKnown RBP9.4□□□□□ -0.9
USB1-206ENST00000562534 Q6JHZ5 121 aa9.4□□□□□ -0.9
USB1-206ENST00000562534 LYRM7Q5U5X0 104 aa9.39□□□□□ -0.91
USB1-206ENST00000562534 NAA38Q9BRA0 125 aaKnown RBP9.39□□□□□ -0.91
USB1-206ENST00000562534 C9orf118A6NHY6 69 aa9.37□□□□□ -0.91
USB1-206ENST00000562534 H3BUT2 72 aa9.37□□□□□ -0.91
USB1-206ENST00000562534 ATXN8Q156A1 80 aa9.37□□□□□ -0.91
USB1-206ENST00000562534 TRBV20-1A0A075B6N2 111 aa9.36□□□□□ -0.91
USB1-206ENST00000562534 PRR4Q16378 134 aa9.36□□□□□ -0.91
USB1-206ENST00000562534 HRCT1Q6UXD1 115 aa9.36□□□□□ -0.91
USB1-206ENST00000562534 TAX1BP3O14907 124 aa9.35□□□□□ -0.91
USB1-206ENST00000562534 TCL1BO95988 128 aa9.35□□□□□ -0.91
USB1-206ENST00000562534 PCP4L1A6NKN8 68 aa9.34□□□□□ -0.91
USB1-206ENST00000562534 H3BMG7 143 aa9.34□□□□□ -0.91
USB1-206ENST00000562534 LIMD2Q9BT23 127 aa9.34□□□□□ -0.91
USB1-206ENST00000562534 UBE2V1Q13404 147 aa9.33□□□□□ -0.92
USB1-206ENST00000562534 COL5A1-AS1Q5SY13 56 aa9.33□□□□□ -0.92
USB1-206ENST00000562534 IGFL1Q6UW32 110 aa9.33□□□□□ -0.92
USB1-206ENST00000562534 A0A0G2JQZ4 141 aa9.32□□□□□ -0.92
USB1-206ENST00000562534 BAALC-AS2P0C853 105 aa9.32□□□□□ -0.92
USB1-206ENST00000562534 RETNLBQ9BQ08 111 aa9.31□□□□□ -0.92
USB1-206ENST00000562534 A0A1W2PPM0 123 aa9.3□□□□□ -0.92
USB1-206ENST00000562534 Q5XG85 94 aa9.3□□□□□ -0.92
USB1-206ENST00000562534 FP248Q71RG6 208 aaPredicted RBP9.29□□□□□ -0.92
USB1-206ENST00000562534 ANKRD29Q8N6D5 301 aa9.27□□□□□ -0.93
USB1-206ENST00000562534 IGLV7-46A0A075B6I9 117 aa9.26□□□□□ -0.93
USB1-206ENST00000562534 TEN1Q86WV5 123 aa9.26□□□□□ -0.93
USB1-206ENST00000562534 TRBV7-7A0A0K0K1E9 115 aa9.25□□□□□ -0.93
USB1-206ENST00000562534 Q6Q795 121 aa9.25□□□□□ -0.93
USB1-206ENST00000562534 HMCN2Q8NDA2 5059 aa9.24□□□□□ -0.93
USB1-206ENST00000562534 RBM3P98179 157 aaKnown RBP9.23□□□□□ -0.93
USB1-206ENST00000562534 C9JAW5 83 aa9.22□□□□□ -0.93
USB1-206ENST00000562534 JMJD7-PLA2G4BH0Y9G9 81 aa9.2□□□□□ -0.94
USB1-206ENST00000562534 ASB16-AS1Q495Z4 193 aa9.2□□□□□ -0.94
USB1-206ENST00000562534 DSCR8Q96T75 97 aa9.2□□□□□ -0.94
USB1-206ENST00000562534 SPCS1Q9Y6A9 102 aa9.2□□□□□ -0.94
USB1-206ENST00000562534 TRBV7-4A0A0J9YYF1 115 aa9.18□□□□□ -0.94
USB1-206ENST00000562534 A0A1B0GV72 72 aa9.18□□□□□ -0.94
USB1-206ENST00000562534 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
USB1-206ENST00000562534 A0A1W2PNM2 257 aa9.17□□□□□ -0.94
USB1-206ENST00000562534 C1orf195Q5TG92 126 aa9.17□□□□□ -0.94
USB1-206ENST00000562534 SS18L2Q9UHA2 77 aa9.17□□□□□ -0.94
USB1-206ENST00000562534 H3BT86 120 aa9.16□□□□□ -0.94
USB1-206ENST00000562534 CCKP06307 115 aa9.15□□□□□ -0.94
USB1-206ENST00000562534 PDE6GP18545 87 aa9.14□□□□□ -0.95
USB1-206ENST00000562534 A0A087WSZ3 146 aa9.13□□□□□ -0.95
USB1-206ENST00000562534 CDIP1Q9H305 208 aa9.13□□□□□ -0.95
USB1-206ENST00000562534 K7EP34 96 aa9.11□□□□□ -0.95
USB1-206ENST00000562534 C21orf62-AS1Q17RA5 79 aa9.11□□□□□ -0.95
USB1-206ENST00000562534 KRTAP13-3Q3SY46 172 aa9.11□□□□□ -0.95
USB1-206ENST00000562534 OBSCN-AS1Q96MR7 158 aa9.11□□□□□ -0.95
USB1-206ENST00000562534 LOC110117498A0A087WWA1 95 aa9.1□□□□□ -0.95
USB1-206ENST00000562534 GTF2H5Q6ZYL4 71 aa9.1□□□□□ -0.95
USB1-206ENST00000562534 VPS25Q9BRG1 176 aa9.09□□□□□ -0.95
USB1-206ENST00000562534 A0A1B0GW54 56 aa9.08□□□□□ -0.96
USB1-206ENST00000562534 MTURNQ8N3F0 131 aa9.08□□□□□ -0.96
USB1-206ENST00000562534 Q6ZQT0 140 aa9.07□□□□□ -0.96
USB1-206ENST00000562534 C14orf132Q9NPU4 83 aa9.06□□□□□ -0.96
USB1-206ENST00000562534 LPAP08519 4548 aa9.04□□□□□ -0.96
USB1-206ENST00000562534 LRP2P98164 4655 aa9.03□□□□□ -0.96
USB1-206ENST00000562534 F8W1H4 67 aa9.02□□□□□ -0.97
USB1-206ENST00000562534 SMCPP49901 116 aaPredicted RBP9.02□□□□□ -0.97
USB1-206ENST00000562534 PRO0461Q9UI25 63 aa9.02□□□□□ -0.97
USB1-206ENST00000562534 Q96NJ1 140 aa9.01□□□□□ -0.97
USB1-206ENST00000562534 C9orf92A6NGG3 77 aa8.99□□□□□ -0.97
USB1-206ENST00000562534 LINC00472Q9H8W2 130 aa8.99□□□□□ -0.97
USB1-206ENST00000562534 IGKV4-1P06312 121 aa8.96□□□□□ -0.98
USB1-206ENST00000562534 XP32Q5T750 250 aa8.96□□□□□ -0.98
USB1-206ENST00000562534 UBR4Q5T4S7 5183 aa8.94□□□□□ -0.98
USB1-206ENST00000562534 J3KT08 172 aa8.93□□□□□ -0.98
USB1-206ENST00000562534 DEFB116Q30KQ4 102 aa8.93□□□□□ -0.98
USB1-206ENST00000562534 SEC61BP60468 96 aaKnown RBP8.92□□□□□ -0.98
USB1-206ENST00000562534 NREPQ16612 68 aa8.92□□□□□ -0.98
USB1-206ENST00000562534 SIGMAR1Q99720 223 aa8.92□□□□□ -0.98
USB1-206ENST00000562534 LINC00313P59037 77 aa8.87□□□□□ -0.99
USB1-206ENST00000562534 ETDBQ3ZM63 59 aa8.87□□□□□ -0.99
USB1-206ENST00000562534 NDUFB1O75438 58 aa8.85□□□□□ -0.99
USB1-206ENST00000562534 A0A1B0GV90 55 aa8.83□□□□□ -1
USB1-206ENST00000562534 RPL37P61927 97 aaKnown RBP8.83□□□□□ -1
USB1-206ENST00000562534 IGHV6-1A0A0B4J1U7 121 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms