RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 MT2AP02795 61 aa1.41□□□□□ -2.18
SMG1-204ENST00000561940 MT-ND4LP03901 98 aa1.41□□□□□ -2.18
SMG1-204ENST00000561940 HIST1H1DP16402 221 aaKnown RBP1.41□□□□□ -2.18
SMG1-204ENST00000561940 Q5XG85 94 aa1.41□□□□□ -2.18
SMG1-204ENST00000561940 ZNF818PQ6ZRF7 136 aa1.41□□□□□ -2.18
SMG1-204ENST00000561940 C9orf116Q5BN46 136 aaPredicted RBP1.4□□□□□ -2.19
SMG1-204ENST00000561940 CFAP126Q5VTH2 177 aa1.4□□□□□ -2.19
SMG1-204ENST00000561940 XAF1Q6GPH4 301 aa1.4□□□□□ -2.19
SMG1-204ENST00000561940 NDUFA12Q9UI09 145 aa1.4□□□□□ -2.19
SMG1-204ENST00000561940 GVQW2A0A096LPI5 108 aaPredicted RBP1.39□□□□□ -2.19
SMG1-204ENST00000561940 MT1FP04733 61 aa1.39□□□□□ -2.19
SMG1-204ENST00000561940 NMSQ5H8A3 153 aa1.39□□□□□ -2.19
SMG1-204ENST00000561940 AGPAT4-IT1Q9H0P7 198 aa1.39□□□□□ -2.19
SMG1-204ENST00000561940 TRBV10-1A0A0K0K1A3 114 aa1.38□□□□□ -2.19
SMG1-204ENST00000561940 FAM24AA6NFZ4 105 aa1.38□□□□□ -2.19
SMG1-204ENST00000561940 SPRR2EP22531 72 aa1.38□□□□□ -2.19
SMG1-204ENST00000561940 SPRR2BP35325 72 aa1.38□□□□□ -2.19
SMG1-204ENST00000561940 SPRR2AP35326 72 aa1.38□□□□□ -2.19
SMG1-204ENST00000561940 Q6AWC8 147 aa1.38□□□□□ -2.19
SMG1-204ENST00000561940 TMEM91Q6ZNR0 172 aa1.38□□□□□ -2.19
SMG1-204ENST00000561940 UBE2D4Q9Y2X8 147 aa1.38□□□□□ -2.19
SMG1-204ENST00000561940 RBAKDNA6NC62 111 aa1.37□□□□□ -2.19
SMG1-204ENST00000561940 SPINK1P00995 79 aa1.37□□□□□ -2.19
SMG1-204ENST00000561940 LENEPQ9Y5L5 61 aa1.37□□□□□ -2.19
SMG1-204ENST00000561940 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
SMG1-204ENST00000561940 TRBV7-3A0A075B6L6 115 aa1.36□□□□□ -2.19
SMG1-204ENST00000561940 CEBPZOSA8MTT3 80 aa1.36□□□□□ -2.19
SMG1-204ENST00000561940 GNG2P59768 71 aa1.36□□□□□ -2.19
SMG1-204ENST00000561940 UBE2D3P61077 147 aa1.36□□□□□ -2.19
SMG1-204ENST00000561940 UBE2D2P62837 147 aa1.36□□□□□ -2.19
SMG1-204ENST00000561940 KRTAP5-10Q6L8G5 202 aa1.36□□□□□ -2.19
SMG1-204ENST00000561940 CSAG1Q6PB30 78 aa1.36□□□□□ -2.19
SMG1-204ENST00000561940 C20orf202A1L168 122 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 EFCAB10A6NFE3 127 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 IL5P05113 134 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 IGLC2P0DOY2 106 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 SPRR2DP22532 72 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 RPS29P62273 56 aaKnown RBP1.35□□□□□ -2.19
SMG1-204ENST00000561940 Q86TA4 180 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 DEFB107AQ8IZN7 70 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 ATOH7Q8N100 152 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 DMAC1Q96GE9 116 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 ATG5Q9H1Y0 275 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 MRPL35Q9NZE8 188 aaKnown RBP1.35□□□□□ -2.19
SMG1-204ENST00000561940 GSKIPQ9P0R6 139 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 COMMD3Q9UBI1 195 aa1.35□□□□□ -2.19
SMG1-204ENST00000561940 TRAV21A0A0B4J279 112 aa1.34□□□□□ -2.19
SMG1-204ENST00000561940 HIGD1CA8MV81 97 aa1.34□□□□□ -2.19
SMG1-204ENST00000561940 H3BQ15 152 aa1.34□□□□□ -2.19
SMG1-204ENST00000561940 ADCYAP1P18509 176 aa1.34□□□□□ -2.19
SMG1-204ENST00000561940 AKR1D1P51857 326 aa1.34□□□□□ -2.19
SMG1-204ENST00000561940 S100A10P60903 97 aa1.34□□□□□ -2.19
SMG1-204ENST00000561940 CLPSL2Q6UWE3 100 aa1.34□□□□□ -2.19
SMG1-204ENST00000561940 FLGP20930 4061 aaPredicted RBP1.33□□□□□ -2.2
SMG1-204ENST00000561940 TRBV25-1A0A075B6N4 114 aa1.33□□□□□ -2.2
SMG1-204ENST00000561940 M0R3E3 92 aa1.33□□□□□ -2.2
SMG1-204ENST00000561940 PDCD5O14737 125 aa1.33□□□□□ -2.2
SMG1-204ENST00000561940 ARPC5O15511 151 aa1.33□□□□□ -2.2
SMG1-204ENST00000561940 IQCJQ1A5X6 159 aa1.33□□□□□ -2.2
SMG1-204ENST00000561940 CYP2G1PQ6ZSU1 146 aa1.33□□□□□ -2.2
SMG1-204ENST00000561940 AQP10Q96PS8 301 aa1.33□□□□□ -2.2
SMG1-204ENST00000561940 VPS25Q9BRG1 176 aa1.33□□□□□ -2.2
SMG1-204ENST00000561940 NAA60Q9H7X0 242 aa1.33□□□□□ -2.2
SMG1-204ENST00000561940 NPVFQ9HCQ7 196 aa1.33□□□□□ -2.2
SMG1-204ENST00000561940 TRAV1-2A0A0B4J238 106 aa1.32□□□□□ -2.2
SMG1-204ENST00000561940 BCE1O60756 84 aa1.32□□□□□ -2.2
SMG1-204ENST00000561940 CD3DP04234 171 aa1.32□□□□□ -2.2
SMG1-204ENST00000561940 IL7P13232 177 aa1.32□□□□□ -2.2
SMG1-204ENST00000561940 CKS1BP61024 79 aa1.32□□□□□ -2.2
SMG1-204ENST00000561940 SPRR2FQ96RM1 72 aa1.32□□□□□ -2.2
SMG1-204ENST00000561940 TRBV6-1A0A0K0K1D8 114 aa1.31□□□□□ -2.2
SMG1-204ENST00000561940 TCRBV3S1A0A5B6 114 aa1.31□□□□□ -2.2
SMG1-204ENST00000561940 IGKCP01834 107 aa1.31□□□□□ -2.2
SMG1-204ENST00000561940 NCS1P62166 190 aa1.31□□□□□ -2.2
SMG1-204ENST00000561940 PPDPFLQ8WWR9 84 aa1.31□□□□□ -2.2
SMG1-204ENST00000561940 PIGBOS1A0A0B4J2F0 54 aa1.3□□□□□ -2.2
SMG1-204ENST00000561940 LOC105371267A0A1B0GV96 52 aa1.3□□□□□ -2.2
SMG1-204ENST00000561940 C10orf113Q5VZT2 155 aa1.3□□□□□ -2.2
SMG1-204ENST00000561940 FXYD6Q9H0Q3 95 aa1.3□□□□□ -2.2
SMG1-204ENST00000561940 COPZ2Q9P299 210 aa1.3□□□□□ -2.2
SMG1-204ENST00000561940 AP4S1Q9Y587 144 aa1.3□□□□□ -2.2
SMG1-204ENST00000561940 LOC100130705A0A1B0GUX0 176 aa1.29□□□□□ -2.2
SMG1-204ENST00000561940 J3QR89 54 aa1.29□□□□□ -2.2
SMG1-204ENST00000561940 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
SMG1-204ENST00000561940 SMCO1Q147U7 214 aa1.29□□□□□ -2.2
SMG1-204ENST00000561940 FAM74A4Q5TZK3 123 aa1.29□□□□□ -2.2
SMG1-204ENST00000561940 PFDN5Q99471 154 aa1.29□□□□□ -2.2
SMG1-204ENST00000561940 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
SMG1-204ENST00000561940 AHNAK2Q8IVF2 5795 aa1.28□□□□□ -2.2
SMG1-204ENST00000561940 TRBV20-1A0A075B6N2 111 aa1.28□□□□□ -2.2
SMG1-204ENST00000561940 CLLU1Q5K131 121 aa1.28□□□□□ -2.2
SMG1-204ENST00000561940 SSBP3-AS1Q7Z2R9 100 aa1.28□□□□□ -2.2
SMG1-204ENST00000561940 PAIP2BQ9ULR5 123 aaKnown RBP1.28□□□□□ -2.2
SMG1-204ENST00000561940 LINC00959A0A1B0GUT2 108 aa1.27□□□□□ -2.21
SMG1-204ENST00000561940 SLC25A6P12236 298 aa1.27□□□□□ -2.21
SMG1-204ENST00000561940 SNX29P2Q8IUI4 249 aa1.27□□□□□ -2.21
SMG1-204ENST00000561940 NMES1Q9C002 83 aa1.27□□□□□ -2.21
SMG1-204ENST00000561940 C9orf92A6NGG3 77 aa1.26□□□□□ -2.21
SMG1-204ENST00000561940 ARMS2P0C7Q2 107 aa1.26□□□□□ -2.21
SMG1-204ENST00000561940 ATP11AUNQ6ZP68 121 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms