RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 RNF213Q63HN8 5207 aa7.78□□□□□ -1.16
TPM1-230ENST00000561266 FP248Q71RG6 208 aaPredicted RBP7.77□□□□□ -1.17
TPM1-230ENST00000561266 TMEM238LA0A1B0GVL6 79 aa7.76□□□□□ -1.17
TPM1-230ENST00000561266 A6NJY4 79 aa7.76□□□□□ -1.17
TPM1-230ENST00000561266 TRIAP1O43715 76 aa7.76□□□□□ -1.17
TPM1-230ENST00000561266 KRTAP13-3Q3SY46 172 aa7.76□□□□□ -1.17
TPM1-230ENST00000561266 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.76□□□□□ -1.17
TPM1-230ENST00000561266 LOC105371267A0A1B0GV96 52 aa7.74□□□□□ -1.17
TPM1-230ENST00000561266 H0YGX0 51 aa7.73□□□□□ -1.17
TPM1-230ENST00000561266 CD164Q04900 197 aa7.73□□□□□ -1.17
TPM1-230ENST00000561266 MUC17Q685J3 4493 aa7.73□□□□□ -1.17
TPM1-230ENST00000561266 IGLV8-61A0A075B6I0 122 aa7.72□□□□□ -1.17
TPM1-230ENST00000561266 CLEC2BQ92478 149 aa7.72□□□□□ -1.17
TPM1-230ENST00000561266 CDIP1Q9H305 208 aa7.72□□□□□ -1.17
TPM1-230ENST00000561266 OCIAD2Q56VL3 154 aa7.71□□□□□ -1.18
TPM1-230ENST00000561266 IGFL1Q6UW32 110 aa7.71□□□□□ -1.18
TPM1-230ENST00000561266 H3BUT2 72 aa7.7□□□□□ -1.18
TPM1-230ENST00000561266 SMIM6P0DI80 62 aa7.69□□□□□ -1.18
TPM1-230ENST00000561266 F8WEM9 126 aa7.68□□□□□ -1.18
TPM1-230ENST00000561266 C1orf195Q5TG92 126 aa7.68□□□□□ -1.18
TPM1-230ENST00000561266 LIMD2Q9BT23 127 aa7.68□□□□□ -1.18
TPM1-230ENST00000561266 Q5XG85 94 aa7.67□□□□□ -1.18
TPM1-230ENST00000561266 PPDPFLQ8WWR9 84 aa7.67□□□□□ -1.18
TPM1-230ENST00000561266 SNHG12Q9BXW3 62 aa7.67□□□□□ -1.18
TPM1-230ENST00000561266 MUC2Q02817 5179 aa7.65□□□□□ -1.18
TPM1-230ENST00000561266 A0A1B0GX51 115 aa7.65□□□□□ -1.18
TPM1-230ENST00000561266 PSMB2P49721 201 aa7.65□□□□□ -1.18
TPM1-230ENST00000561266 Q6JHZ5 121 aa7.65□□□□□ -1.18
TPM1-230ENST00000561266 NDUFV3P56181 108 aaKnown RBP7.64□□□□□ -1.19
TPM1-230ENST00000561266 TRBV7-7A0A0K0K1E9 115 aa7.63□□□□□ -1.19
TPM1-230ENST00000561266 XP32Q5T750 250 aa7.62□□□□□ -1.19
TPM1-230ENST00000561266 KRTAP4-1Q9BYQ7 146 aa7.62□□□□□ -1.19
TPM1-230ENST00000561266 C9orf92A6NGG3 77 aa7.61□□□□□ -1.19
TPM1-230ENST00000561266 FABP2P12104 132 aa7.61□□□□□ -1.19
TPM1-230ENST00000561266 NAA38Q9BRA0 125 aaKnown RBP7.61□□□□□ -1.19
TPM1-230ENST00000561266 SNCGO76070 127 aa7.6□□□□□ -1.19
TPM1-230ENST00000561266 H3BMG7 143 aa7.59□□□□□ -1.19
TPM1-230ENST00000561266 A0A1B0GV72 72 aa7.58□□□□□ -1.2
TPM1-230ENST00000561266 COX6CP09669 75 aa7.58□□□□□ -1.2
TPM1-230ENST00000561266 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
TPM1-230ENST00000561266 LST1O00453 97 aa7.57□□□□□ -1.2
TPM1-230ENST00000561266 ORMDL1Q9P0S3 153 aa7.57□□□□□ -1.2
TPM1-230ENST00000561266 A0A1W2PNM2 257 aa7.56□□□□□ -1.2
TPM1-230ENST00000561266 M0R143 59 aa7.56□□□□□ -1.2
TPM1-230ENST00000561266 TCL1BO95988 128 aa7.56□□□□□ -1.2
TPM1-230ENST00000561266 SCGB1C2P0DMR2 95 aa7.56□□□□□ -1.2
TPM1-230ENST00000561266 DNAL4O96015 105 aa7.55□□□□□ -1.2
TPM1-230ENST00000561266 Q6Q795 121 aa7.55□□□□□ -1.2
TPM1-230ENST00000561266 TRACP01848 142 aa7.54□□□□□ -1.2
TPM1-230ENST00000561266 TSTD3H0UI37 97 aa7.53□□□□□ -1.2
TPM1-230ENST00000561266 TEN1Q86WV5 123 aa7.53□□□□□ -1.2
TPM1-230ENST00000561266 A0A087WSZ3 146 aa7.51□□□□□ -1.21
TPM1-230ENST00000561266 TMEM256-PLSCR3K7ERE1 68 aa7.51□□□□□ -1.21
TPM1-230ENST00000561266 BATFQ16520 125 aa7.51□□□□□ -1.21
TPM1-230ENST00000561266 Q96NJ1 140 aa7.51□□□□□ -1.21
TPM1-230ENST00000561266 GHRHP01286 108 aa7.5□□□□□ -1.21
TPM1-230ENST00000561266 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
TPM1-230ENST00000561266 UBE2V1Q13404 147 aa7.5□□□□□ -1.21
TPM1-230ENST00000561266 BAALC-AS2P0C853 105 aa7.49□□□□□ -1.21
TPM1-230ENST00000561266 PCOTHQ58A44 107 aa7.48□□□□□ -1.21
TPM1-230ENST00000561266 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
TPM1-230ENST00000561266 ANKRD29Q8N6D5 301 aa7.48□□□□□ -1.21
TPM1-230ENST00000561266 FAT4Q6V0I7 4981 aa7.47□□□□□ -1.21
TPM1-230ENST00000561266 H3BQ85 93 aa7.47□□□□□ -1.21
TPM1-230ENST00000561266 TRBV7-4A0A0J9YYF1 115 aa7.45□□□□□ -1.22
TPM1-230ENST00000561266 TAX1BP3O14907 124 aa7.45□□□□□ -1.22
TPM1-230ENST00000561266 ATXN8Q156A1 80 aa7.44□□□□□ -1.22
TPM1-230ENST00000561266 CCKP06307 115 aa7.43□□□□□ -1.22
TPM1-230ENST00000561266 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
TPM1-230ENST00000561266 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
TPM1-230ENST00000561266 SS18L2Q9UHA2 77 aa7.43□□□□□ -1.22
TPM1-230ENST00000561266 OBSCN-AS1Q96MR7 158 aa7.42□□□□□ -1.22
TPM1-230ENST00000561266 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
TPM1-230ENST00000561266 RBM3P98179 157 aaKnown RBP7.41□□□□□ -1.22
TPM1-230ENST00000561266 DEFB116Q30KQ4 102 aa7.4□□□□□ -1.22
TPM1-230ENST00000561266 LINC00472Q9H8W2 130 aa7.39□□□□□ -1.23
TPM1-230ENST00000561266 C9JAW5 83 aa7.38□□□□□ -1.23
TPM1-230ENST00000561266 KRTAP19-2Q3LHN2 52 aa7.38□□□□□ -1.23
TPM1-230ENST00000561266 VPS25Q9BRG1 176 aa7.38□□□□□ -1.23
TPM1-230ENST00000561266 A0A0U1RQV1 116 aa7.37□□□□□ -1.23
TPM1-230ENST00000561266 A0A1W2PPM0 123 aa7.37□□□□□ -1.23
TPM1-230ENST00000561266 DSCR10P59022 87 aa7.36□□□□□ -1.23
TPM1-230ENST00000561266 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
TPM1-230ENST00000561266 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
TPM1-230ENST00000561266 MTURNQ8N3F0 131 aa7.36□□□□□ -1.23
TPM1-230ENST00000561266 DSCR8Q96T75 97 aa7.36□□□□□ -1.23
TPM1-230ENST00000561266 TRBV20-1A0A075B6N2 111 aa7.35□□□□□ -1.23
TPM1-230ENST00000561266 IGKV4-1P06312 121 aa7.35□□□□□ -1.23
TPM1-230ENST00000561266 Q6ZQT0 140 aa7.35□□□□□ -1.23
TPM1-230ENST00000561266 SIGMAR1Q99720 223 aa7.34□□□□□ -1.23
TPM1-230ENST00000561266 LYRM7Q5U5X0 104 aa7.33□□□□□ -1.24
TPM1-230ENST00000561266 Q75L30 129 aa7.33□□□□□ -1.24
TPM1-230ENST00000561266 C14orf132Q9NPU4 83 aa7.33□□□□□ -1.24
TPM1-230ENST00000561266 LOC110117498A0A087WWA1 95 aa7.32□□□□□ -1.24
TPM1-230ENST00000561266 KRTAP16-1A8MUX0 517 aa7.31□□□□□ -1.24
TPM1-230ENST00000561266 JMJD7-PLA2G4BH0Y9G9 81 aa7.31□□□□□ -1.24
TPM1-230ENST00000561266 C20orf166-AS1Q96NR2 134 aa7.31□□□□□ -1.24
TPM1-230ENST00000561266 A8MUU9 505 aa7.3□□□□□ -1.24
TPM1-230ENST00000561266 SMCPP49901 116 aaPredicted RBP7.27□□□□□ -1.25
TPM1-230ENST00000561266 LINC00313P59037 77 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms