RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 KRTAP2-3P0C7H8 128 aa0.78□□□□□ -2.28
USP8-217ENST00000561211 KRTAP2-4Q9BYR9 128 aa0.78□□□□□ -2.28
USP8-217ENST00000561211 KRTAP2-1Q9BYU5 128 aa0.78□□□□□ -2.28
USP8-217ENST00000561211 CSPG4Q6UVK1 2322 aa0.78□□□□□ -2.28
USP8-217ENST00000561211 PCNX1Q96RV3 2341 aa0.78□□□□□ -2.28
USP8-217ENST00000561211 NCOR1O75376 2440 aa0.78□□□□□ -2.28
USP8-217ENST00000561211 ABCC8Q09428 1581 aa0.78□□□□□ -2.29
USP8-217ENST00000561211 UNC79Q9P2D8 2635 aa0.78□□□□□ -2.29
USP8-217ENST00000561211 DEPDC5O75140 1603 aa0.78□□□□□ -2.29
USP8-217ENST00000561211 AKAP13Q12802 2813 aa0.78□□□□□ -2.29
USP8-217ENST00000561211 PLNP26678 52 aa0.77□□□□□ -2.29
USP8-217ENST00000561211 NRXN3Q9Y4C0 1643 aa0.77□□□□□ -2.29
USP8-217ENST00000561211 SMIM27A0A1W2PRY6 76 aa0.76□□□□□ -2.29
USP8-217ENST00000561211 SMR3AQ99954 134 aa0.76□□□□□ -2.29
USP8-217ENST00000561211 OTOGQ6ZRI0 2925 aa0.76□□□□□ -2.29
USP8-217ENST00000561211 BSNQ9UPA5 3926 aa0.76□□□□□ -2.29
USP8-217ENST00000561211 FAT2Q9NYQ8 4349 aa0.75□□□□□ -2.29
USP8-217ENST00000561211 H0YGX0 51 aa0.75□□□□□ -2.29
USP8-217ENST00000561211 DEFB130BP0DP73 79 aa0.75□□□□□ -2.29
USP8-217ENST00000561211 DEFB130AP0DP74 79 aa0.75□□□□□ -2.29
USP8-217ENST00000561211 NOTCH1P46531 2555 aa0.75□□□□□ -2.29
USP8-217ENST00000561211 ANKRD36CQ5JPF3 1778 aa0.75□□□□□ -2.29
USP8-217ENST00000561211 PTPN13Q12923 2485 aa0.74□□□□□ -2.29
USP8-217ENST00000561211 NBASA2RRP1 2371 aa0.74□□□□□ -2.29
USP8-217ENST00000561211 KRTAP5-10Q6L8G5 202 aa0.74□□□□□ -2.29
USP8-217ENST00000561211 C4AP0C0L4 1744 aa0.74□□□□□ -2.29
USP8-217ENST00000561211 C4BP0C0L5 1744 aa0.74□□□□□ -2.29
USP8-217ENST00000561211 CEP290O15078 2479 aa0.73□□□□□ -2.29
USP8-217ENST00000561211 PKD1L2Q7Z442 2459 aa0.73□□□□□ -2.29
USP8-217ENST00000561211 PRH1P02810 166 aa0.73□□□□□ -2.29
USP8-217ENST00000561211 TOMM5Q8N4H5 51 aa0.73□□□□□ -2.29
USP8-217ENST00000561211 ABRACLQ9P1F3 81 aa0.73□□□□□ -2.29
USP8-217ENST00000561211 TOP2AP11388 1531 aaKnown RBP0.73□□□□□ -2.29
USP8-217ENST00000561211 TNXBP22105 4242 aa0.72□□□□□ -2.29
USP8-217ENST00000561211 EP300Q09472 2414 aaPredicted RBP0.72□□□□□ -2.29
USP8-217ENST00000561211 IAPPP10997 89 aa0.72□□□□□ -2.29
USP8-217ENST00000561211 RPS27P42677 84 aaKnown RBP0.72□□□□□ -2.29
USP8-217ENST00000561211 RPS27LQ71UM5 84 aaKnown RBP0.72□□□□□ -2.29
USP8-217ENST00000561211 SETXQ7Z333 2677 aaKnown RBP0.71□□□□□ -2.29
USP8-217ENST00000561211 KIAA0586Q9BVV6 1533 aa0.71□□□□□ -2.3
USP8-217ENST00000561211 SPINK4O60575 86 aa0.71□□□□□ -2.3
USP8-217ENST00000561211 LINC00308Q8TCZ7 52 aa0.71□□□□□ -2.3
USP8-217ENST00000561211 DEFB109BQ30KR1 87 aa0.7□□□□□ -2.3
USP8-217ENST00000561211 MINOS1Q5TGZ0 78 aa0.7□□□□□ -2.3
USP8-217ENST00000561211 PKD1L1Q8TDX9 2849 aa0.7□□□□□ -2.3
USP8-217ENST00000561211 HUWE1Q7Z6Z7 4374 aaKnown RBP0.69□□□□□ -2.3
USP8-217ENST00000561211 TMEM167BQ9NRX6 74 aa0.69□□□□□ -2.3
USP8-217ENST00000561211 UBR5O95071 2799 aaPredicted RBP0.68□□□□□ -2.3
USP8-217ENST00000561211 SPINK6Q6UWN8 80 aa0.68□□□□□ -2.3
USP8-217ENST00000561211 C6orf48Q9UBA6 75 aa0.68□□□□□ -2.3
USP8-217ENST00000561211 TOGARAM1Q9Y4F4 1720 aa0.68□□□□□ -2.3
USP8-217ENST00000561211 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
USP8-217ENST00000561211 IQGAP2Q13576 1575 aa0.67□□□□□ -2.3
USP8-217ENST00000561211 WNK1Q9H4A3 2382 aa0.67□□□□□ -2.3
USP8-217ENST00000561211 USP24Q9UPU5 2620 aa0.66□□□□□ -2.3
USP8-217ENST00000561211 TNRC18O15417 2968 aaPredicted RBP0.66□□□□□ -2.3
USP8-217ENST00000561211 WT1-ASQ06250 92 aa0.65□□□□□ -2.31
USP8-217ENST00000561211 IGSF10Q6WRI0 2623 aa0.64□□□□□ -2.31
USP8-217ENST00000561211 HIVEP3Q5T1R4 2406 aa0.64□□□□□ -2.31
USP8-217ENST00000561211 CDC42BPAQ5VT25 1732 aa0.64□□□□□ -2.31
USP8-217ENST00000561211 KMT2AQ03164 3969 aa0.64□□□□□ -2.31
USP8-217ENST00000561211 NAV2Q8IVL1 2488 aa0.63□□□□□ -2.31
USP8-217ENST00000561211 CELSR1Q9NYQ6 3014 aa0.63□□□□□ -2.31
USP8-217ENST00000561211 NF1P21359 2839 aa0.63□□□□□ -2.31
USP8-217ENST00000561211 SYNE1Q8NF91 8797 aaKnown RBP0.63□□□□□ -2.31
USP8-217ENST00000561211 SRRM2Q9UQ35 2752 aaKnown RBP0.62□□□□□ -2.31
USP8-217ENST00000561211 LMO7Q8WWI1 1683 aa0.62□□□□□ -2.31
USP8-217ENST00000561211 S4R3F8 94 aa0.62□□□□□ -2.31
USP8-217ENST00000561211 EPG5Q9HCE0 2579 aa0.62□□□□□ -2.31
USP8-217ENST00000561211 IQGAP1P46940 1657 aa0.62□□□□□ -2.31
USP8-217ENST00000561211 CACNA1AO00555 2505 aa0.62□□□□□ -2.31
USP8-217ENST00000561211 APC2O95996 2303 aa0.61□□□□□ -2.31
USP8-217ENST00000561211 AHNAK2Q8IVF2 5795 aa0.61□□□□□ -2.31
USP8-217ENST00000561211 NFAT5O94916 1531 aa0.61□□□□□ -2.31
USP8-217ENST00000561211 TFF3Q07654 80 aa0.61□□□□□ -2.31
USP8-217ENST00000561211 SETD2Q9BYW2 2564 aaPredicted RBP0.61□□□□□ -2.31
USP8-217ENST00000561211 LRP1Q07954 4544 aaKnown RBP0.61□□□□□ -2.31
USP8-217ENST00000561211 RIF1Q5UIP0 2472 aaKnown RBP0.6□□□□□ -2.31
USP8-217ENST00000561211 ATP7AQ04656 1500 aa0.6□□□□□ -2.31
USP8-217ENST00000561211 FAM208AQ9UK61 1670 aaKnown RBP0.6□□□□□ -2.31
USP8-217ENST00000561211 LYSTQ99698 3801 aa0.6□□□□□ -2.31
USP8-217ENST00000561211 FLNCQ14315 2725 aa0.6□□□□□ -2.31
USP8-217ENST00000561211 FLNBO75369 2602 aaKnown RBP0.6□□□□□ -2.31
USP8-217ENST00000561211 TENM3Q9P273 2699 aa0.6□□□□□ -2.31
USP8-217ENST00000561211 ACANP16112 2415 aa0.59□□□□□ -2.31
USP8-217ENST00000561211 TIMM8BQ9Y5J9 83 aaPredicted RBP0.59□□□□□ -2.31
USP8-217ENST00000561211 SMIM2Q9BVW6 85 aa0.58□□□□□ -2.32
USP8-217ENST00000561211 NCOR2Q9Y618 2525 aa0.58□□□□□ -2.32
USP8-217ENST00000561211 KIF21BO75037 1637 aa0.57□□□□□ -2.32
USP8-217ENST00000561211 NSD1Q96L73 2696 aaPredicted RBP0.57□□□□□ -2.32
USP8-217ENST00000561211 SPINK1P00995 79 aa0.57□□□□□ -2.32
USP8-217ENST00000561211 PRM1P04553 51 aa0.57□□□□□ -2.32
USP8-217ENST00000561211 PRLHP81277 87 aa0.57□□□□□ -2.32
USP8-217ENST00000561211 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
USP8-217ENST00000561211 U3KQA8 63 aa0.57□□□□□ -2.32
USP8-217ENST00000561211 PKD1P98161 4303 aa0.56□□□□□ -2.32
USP8-217ENST00000561211 SAMD9LQ8IVG5 1584 aa0.56□□□□□ -2.32
USP8-217ENST00000561211 DMBT1Q9UGM3 2413 aaPredicted RBP0.56□□□□□ -2.32
USP8-217ENST00000561211 PDZD2O15018 2839 aa0.56□□□□□ -2.32
USP8-217ENST00000561211 ACACAQ13085 2346 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms