RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, humanhuman

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-208ENST00000560328 NOTCH1P46531 2555 aa5.81□□□□□ -1.48
NEO1-208ENST00000560328 ATMQ13315 3056 aa5.81□□□□□ -1.48
NEO1-208ENST00000560328 A8MUN3 132 aa5.81□□□□□ -1.48
NEO1-208ENST00000560328 PLAC8Q9NZF1 115 aa5.81□□□□□ -1.48
NEO1-208ENST00000560328 SPRR1AP35321 89 aa5.8□□□□□ -1.48
NEO1-208ENST00000560328 COL6A3P12111 3177 aa5.8□□□□□ -1.48
NEO1-208ENST00000560328 KRTAP26-1Q6PEX3 210 aa5.8□□□□□ -1.48
NEO1-208ENST00000560328 FLNCQ14315 2725 aa5.8□□□□□ -1.48
NEO1-208ENST00000560328 CD164Q04900 197 aa5.79□□□□□ -1.48
NEO1-208ENST00000560328 FRYLO94915 3013 aa5.79□□□□□ -1.48
NEO1-208ENST00000560328 UBR5O95071 2799 aaPredicted RBP5.79□□□□□ -1.48
NEO1-208ENST00000560328 BOD1L1Q8NFC6 3051 aa5.79□□□□□ -1.48
NEO1-208ENST00000560328 NBEAL2Q6ZNJ1 2754 aa5.78□□□□□ -1.48
NEO1-208ENST00000560328 PRR26Q8N8Z3 221 aa5.77□□□□□ -1.48
NEO1-208ENST00000560328 BAHCC1Q9P281 2608 aa5.77□□□□□ -1.49
NEO1-208ENST00000560328 COX6B2Q6YFQ2 88 aa5.77□□□□□ -1.49
NEO1-208ENST00000560328 OCR1Q9BZK8 76 aa5.76□□□□□ -1.49
NEO1-208ENST00000560328 DMXL2Q8TDJ6 3036 aa5.76□□□□□ -1.49
NEO1-208ENST00000560328 TNRC18O15417 2968 aaPredicted RBP5.76□□□□□ -1.49
NEO1-208ENST00000560328 SPTBN5Q9NRC6 3674 aaKnown RBP5.76□□□□□ -1.49
NEO1-208ENST00000560328 CYP4F30PQ9H0H9 118 aa5.75□□□□□ -1.49
NEO1-208ENST00000560328 COL12A1Q99715 3063 aa5.75□□□□□ -1.49
NEO1-208ENST00000560328 ITPR1Q14643 2758 aa5.75□□□□□ -1.49
NEO1-208ENST00000560328 ADGRG4Q8IZF6 3080 aa5.74□□□□□ -1.49
NEO1-208ENST00000560328 FAM229BQ4G0N7 80 aa5.74□□□□□ -1.49
NEO1-208ENST00000560328 UQCR11O14957 56 aa5.74□□□□□ -1.49
NEO1-208ENST00000560328 SPANXA2-OT1Q8N9U9 137 aa5.74□□□□□ -1.49
NEO1-208ENST00000560328 Q8N1X5 172 aa5.73□□□□□ -1.49
NEO1-208ENST00000560328 KALRNO60229 2985 aa5.73□□□□□ -1.49
NEO1-208ENST00000560328 NBEAQ8NFP9 2946 aa5.72□□□□□ -1.49
NEO1-208ENST00000560328 LRBAP50851 2863 aa5.71□□□□□ -1.49
NEO1-208ENST00000560328 TACC2O95359 2948 aa5.71□□□□□ -1.5
NEO1-208ENST00000560328 SPRR1BP22528 89 aa5.71□□□□□ -1.5
NEO1-208ENST00000560328 FREM2Q5SZK8 3169 aa5.71□□□□□ -1.5
NEO1-208ENST00000560328 NBEAL1Q6ZS30 2694 aa5.7□□□□□ -1.5
NEO1-208ENST00000560328 RBM12B-AS1Q9P1G2 102 aa5.7□□□□□ -1.5
NEO1-208ENST00000560328 ITPR2Q14571 2701 aa5.69□□□□□ -1.5
NEO1-208ENST00000560328 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
NEO1-208ENST00000560328 IGLV7-46A0A075B6I9 117 aa5.68□□□□□ -1.5
NEO1-208ENST00000560328 MMP24-AS1A0A0U1RRL7 71 aa5.68□□□□□ -1.5
NEO1-208ENST00000560328 KRTAP10-2P60368 255 aa5.67□□□□□ -1.5
NEO1-208ENST00000560328 UTP20O75691 2785 aaKnown RBP5.66□□□□□ -1.5
NEO1-208ENST00000560328 KRTAP10-1P60331 282 aa5.66□□□□□ -1.5
NEO1-208ENST00000560328 EYSQ5T1H1 3165 aa5.66□□□□□ -1.5
NEO1-208ENST00000560328 LINC00472Q9H8W2 130 aa5.66□□□□□ -1.5
NEO1-208ENST00000560328 LCE6AA0A183 80 aa5.64□□□□□ -1.51
NEO1-208ENST00000560328 SPEGQ15772 3267 aa5.64□□□□□ -1.51
NEO1-208ENST00000560328 PANO1I0J062 215 aa5.64□□□□□ -1.51
NEO1-208ENST00000560328 REV3LO60673 3130 aa5.64□□□□□ -1.51
NEO1-208ENST00000560328 HRES1P13985 223 aa5.63□□□□□ -1.51
NEO1-208ENST00000560328 Q6ZSA8 131 aa5.63□□□□□ -1.51
NEO1-208ENST00000560328 Q6ZR54 194 aa5.62□□□□□ -1.51
NEO1-208ENST00000560328 KRTAP4-16G5E9R7 235 aaPredicted RBP5.62□□□□□ -1.51
NEO1-208ENST00000560328 NSD1Q96L73 2696 aaPredicted RBP5.62□□□□□ -1.51
NEO1-208ENST00000560328 DMXL1Q9Y485 3027 aa5.62□□□□□ -1.51
NEO1-208ENST00000560328 USP34Q70CQ2 3546 aa5.6□□□□□ -1.51
NEO1-208ENST00000560328 ZZEF1O43149 2961 aa5.6□□□□□ -1.51
NEO1-208ENST00000560328 ZCCHC13Q8WW36 166 aaKnown RBP5.6□□□□□ -1.51
NEO1-208ENST00000560328 HIVEP1P15822 2718 aa5.6□□□□□ -1.51
NEO1-208ENST00000560328 Q8N9P0 234 aaPredicted RBP5.6□□□□□ -1.51
NEO1-208ENST00000560328 LINC00483Q53H64 154 aa5.59□□□□□ -1.52
NEO1-208ENST00000560328 APCP25054 2843 aa5.58□□□□□ -1.52
NEO1-208ENST00000560328 Q5VSD8 79 aa5.58□□□□□ -1.52
NEO1-208ENST00000560328 A0A0D9SG42 100 aa5.57□□□□□ -1.52
NEO1-208ENST00000560328 LINC01554Q52M75 96 aa5.57□□□□□ -1.52
NEO1-208ENST00000560328 CYSTM1Q9H1C7 97 aa5.57□□□□□ -1.52
NEO1-208ENST00000560328 Q1T7F1 81 aa5.56□□□□□ -1.52
NEO1-208ENST00000560328 CFAP47Q6ZTR5 3102 aa5.56□□□□□ -1.52
NEO1-208ENST00000560328 Q5W150 140 aa5.56□□□□□ -1.52
NEO1-208ENST00000560328 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
NEO1-208ENST00000560328 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
NEO1-208ENST00000560328 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
NEO1-208ENST00000560328 Q6ZRN7 208 aaPredicted RBP5.53□□□□□ -1.52
NEO1-208ENST00000560328 STAB2Q8WWQ8 2551 aa5.52□□□□□ -1.53
NEO1-208ENST00000560328 KRTAP11-1Q8IUC1 163 aa5.52□□□□□ -1.53
NEO1-208ENST00000560328 LOC400499M0QZD8 3231 aa5.51□□□□□ -1.53
NEO1-208ENST00000560328 SPINK7P58062 85 aa5.51□□□□□ -1.53
NEO1-208ENST00000560328 ASH1LQ9NR48 2969 aaKnown RBP5.51□□□□□ -1.53
NEO1-208ENST00000560328 ZANQ9Y493 2812 aa5.5□□□□□ -1.53
NEO1-208ENST00000560328 A0A087X002 238 aa5.5□□□□□ -1.53
NEO1-208ENST00000560328 KMT2BQ9UMN6 2715 aaPredicted RBP5.5□□□□□ -1.53
NEO1-208ENST00000560328 KRTAP7-1Q8IUC3 87 aa5.5□□□□□ -1.53
NEO1-208ENST00000560328 A0A1B0GU33 70 aa5.49□□□□□ -1.53
NEO1-208ENST00000560328 MYO15AQ9UKN7 3530 aa5.48□□□□□ -1.53
NEO1-208ENST00000560328 HRNRQ86YZ3 2850 aaPredicted RBP5.47□□□□□ -1.53
NEO1-208ENST00000560328 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
NEO1-208ENST00000560328 Q75L30 129 aa5.47□□□□□ -1.53
NEO1-208ENST00000560328 KTN1-AS1Q86SY8 53 aa5.46□□□□□ -1.53
NEO1-208ENST00000560328 NIPBLQ6KC79 2804 aaeCLIP5.46□□□□□ -1.54
NEO1-208ENST00000560328 CELSR2Q9HCU4 2923 aa5.46□□□□□ -1.54
NEO1-208ENST00000560328 S4R3F8 94 aa5.46□□□□□ -1.54
NEO1-208ENST00000560328 CSAG1Q6PB30 78 aa5.45□□□□□ -1.54
NEO1-208ENST00000560328 FP248Q71RG6 208 aaPredicted RBP5.45□□□□□ -1.54
NEO1-208ENST00000560328 CRYBG3Q68DQ2 2970 aa5.45□□□□□ -1.54
NEO1-208ENST00000560328 KRTAP29-1A8MX34 341 aaPredicted RBP5.45□□□□□ -1.54
NEO1-208ENST00000560328 Q5XG85 94 aa5.44□□□□□ -1.54
NEO1-208ENST00000560328 M0R2T5 61 aa5.44□□□□□ -1.54
NEO1-208ENST00000560328 TENM4Q6N022 2769 aa5.43□□□□□ -1.54
NEO1-208ENST00000560328 SEC61BP60468 96 aaKnown RBP5.42□□□□□ -1.54
NEO1-208ENST00000560328 NOTCH2NLQ7Z3S9 236 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms