RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 LINC01547P58512 204 aaPredicted RBP13.24□□□□□ -0.29
CRNDE-209ENST00000560208 IGLV5-48A0A075B6I7 105 aa13.23□□□□□ -0.29
CRNDE-209ENST00000560208 Q6ZQY7 126 aa13.22□□□□□ -0.29
CRNDE-209ENST00000560208 A0A0U1RQV1 116 aa13.21□□□□□ -0.29
CRNDE-209ENST00000560208 Q8N377 158 aa13.2□□□□□ -0.3
CRNDE-209ENST00000560208 SPINK1P00995 79 aa13.18□□□□□ -0.3
CRNDE-209ENST00000560208 FP248Q71RG6 208 aaPredicted RBP13.18□□□□□ -0.3
CRNDE-209ENST00000560208 SMIM29Q86T20 159 aa13.18□□□□□ -0.3
CRNDE-209ENST00000560208 H0YGX0 51 aa13.17□□□□□ -0.3
CRNDE-209ENST00000560208 TRIAP1O43715 76 aa13.16□□□□□ -0.3
CRNDE-209ENST00000560208 FAM218AQ96MZ4 157 aa13.16□□□□□ -0.3
CRNDE-209ENST00000560208 MUC17Q685J3 4493 aa13.16□□□□□ -0.3
CRNDE-209ENST00000560208 PSMB2P49721 201 aa13.15□□□□□ -0.3
CRNDE-209ENST00000560208 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.15□□□□□ -0.3
CRNDE-209ENST00000560208 HRCT1Q6UXD1 115 aa13.14□□□□□ -0.31
CRNDE-209ENST00000560208 TSTD3H0UI37 97 aa13.12□□□□□ -0.31
CRNDE-209ENST00000560208 SNCGO76070 127 aa13.12□□□□□ -0.31
CRNDE-209ENST00000560208 F8WEM9 126 aa13.1□□□□□ -0.31
CRNDE-209ENST00000560208 M0R143 59 aa13.09□□□□□ -0.31
CRNDE-209ENST00000560208 CLEC2BQ92478 149 aa13.09□□□□□ -0.31
CRNDE-209ENST00000560208 A0A0G2JQZ4 141 aa13.07□□□□□ -0.32
CRNDE-209ENST00000560208 RPS29P62273 56 aaKnown RBP13.07□□□□□ -0.32
CRNDE-209ENST00000560208 KRTAP13-3Q3SY46 172 aa13.07□□□□□ -0.32
CRNDE-209ENST00000560208 COX6CP09669 75 aa13.05□□□□□ -0.32
CRNDE-209ENST00000560208 SNHG12Q9BXW3 62 aa13.05□□□□□ -0.32
CRNDE-209ENST00000560208 FAT4Q6V0I7 4981 aa13.03□□□□□ -0.32
CRNDE-209ENST00000560208 A0A1B0GX51 115 aa13.03□□□□□ -0.32
CRNDE-209ENST00000560208 PPDPFLQ8WWR9 84 aa13.03□□□□□ -0.32
CRNDE-209ENST00000560208 OCIAD2Q56VL3 154 aa13.02□□□□□ -0.33
CRNDE-209ENST00000560208 SCGB1C2P0DMR2 95 aa13.01□□□□□ -0.33
CRNDE-209ENST00000560208 DNAL4O96015 105 aa12.99□□□□□ -0.33
CRNDE-209ENST00000560208 BATFQ16520 125 aa12.99□□□□□ -0.33
CRNDE-209ENST00000560208 FABP2P12104 132 aa12.97□□□□□ -0.33
CRNDE-209ENST00000560208 CD164Q04900 197 aa12.97□□□□□ -0.33
CRNDE-209ENST00000560208 LCE2AQ5TA79 106 aaPredicted RBP12.97□□□□□ -0.33
CRNDE-209ENST00000560208 LIMD2Q9BT23 127 aa12.97□□□□□ -0.33
CRNDE-209ENST00000560208 H3BUT2 72 aa12.96□□□□□ -0.33
CRNDE-209ENST00000560208 NAA38Q9BRA0 125 aaKnown RBP12.96□□□□□ -0.33
CRNDE-209ENST00000560208 GHRHP01286 108 aa12.94□□□□□ -0.34
CRNDE-209ENST00000560208 Q6JHZ5 121 aa12.94□□□□□ -0.34
CRNDE-209ENST00000560208 IGLV8-61A0A075B6I0 122 aa12.93□□□□□ -0.34
CRNDE-209ENST00000560208 NDUFV3P56181 108 aaKnown RBP12.93□□□□□ -0.34
CRNDE-209ENST00000560208 ASB16-AS1Q495Z4 193 aa12.93□□□□□ -0.34
CRNDE-209ENST00000560208 IGFL1Q6UW32 110 aa12.93□□□□□ -0.34
CRNDE-209ENST00000560208 ORMDL1Q9P0S3 153 aa12.92□□□□□ -0.34
CRNDE-209ENST00000560208 LST1O00453 97 aa12.88□□□□□ -0.35
CRNDE-209ENST00000560208 SEC61BP60468 96 aaKnown RBP12.88□□□□□ -0.35
CRNDE-209ENST00000560208 H3BMG7 143 aa12.86□□□□□ -0.35
CRNDE-209ENST00000560208 A0A1B0GV72 72 aa12.85□□□□□ -0.35
CRNDE-209ENST00000560208 TRACP01848 142 aa12.85□□□□□ -0.35
CRNDE-209ENST00000560208 H3BQ85 93 aa12.83□□□□□ -0.36
CRNDE-209ENST00000560208 TMEM256-PLSCR3K7ERE1 68 aa12.82□□□□□ -0.36
CRNDE-209ENST00000560208 TRBV7-7A0A0K0K1E9 115 aa12.81□□□□□ -0.36
CRNDE-209ENST00000560208 XP32Q5T750 250 aa12.81□□□□□ -0.36
CRNDE-209ENST00000560208 Q5XG85 94 aa12.81□□□□□ -0.36
CRNDE-209ENST00000560208 KRTAP4-1Q9BYQ7 146 aa12.81□□□□□ -0.36
CRNDE-209ENST00000560208 TCL1BO95988 128 aa12.8□□□□□ -0.36
CRNDE-209ENST00000560208 ATXN8Q156A1 80 aa12.79□□□□□ -0.36
CRNDE-209ENST00000560208 C1orf195Q5TG92 126 aa12.77□□□□□ -0.37
CRNDE-209ENST00000560208 LYRM7Q5U5X0 104 aa12.75□□□□□ -0.37
CRNDE-209ENST00000560208 KRTAP9-2Q9BYQ4 174 aa12.75□□□□□ -0.37
CRNDE-209ENST00000560208 BAALC-AS2P0C853 105 aa12.74□□□□□ -0.37
CRNDE-209ENST00000560208 UBE2V1Q13404 147 aa12.74□□□□□ -0.37
CRNDE-209ENST00000560208 TAX1BP3O14907 124 aa12.73□□□□□ -0.37
CRNDE-209ENST00000560208 C9orf118A6NHY6 69 aa12.72□□□□□ -0.37
CRNDE-209ENST00000560208 TEN1Q86WV5 123 aa12.72□□□□□ -0.37
CRNDE-209ENST00000560208 ANKRD29Q8N6D5 301 aa12.72□□□□□ -0.37
CRNDE-209ENST00000560208 Q6Q795 121 aa12.71□□□□□ -0.37
CRNDE-209ENST00000560208 A0A1W2PNM2 257 aa12.68□□□□□ -0.38
CRNDE-209ENST00000560208 C9orf92A6NGG3 77 aa12.68□□□□□ -0.38
CRNDE-209ENST00000560208 A0A087WSZ3 146 aa12.67□□□□□ -0.38
CRNDE-209ENST00000560208 TRBV20-1A0A075B6N2 111 aa12.66□□□□□ -0.38
CRNDE-209ENST00000560208 A0A1W2PPM0 123 aa12.65□□□□□ -0.38
CRNDE-209ENST00000560208 PCP4L1A6NKN8 68 aa12.65□□□□□ -0.38
CRNDE-209ENST00000560208 SS18L2Q9UHA2 77 aa12.65□□□□□ -0.38
CRNDE-209ENST00000560208 RBM3P98179 157 aaKnown RBP12.64□□□□□ -0.39
CRNDE-209ENST00000560208 C9JAW5 83 aa12.63□□□□□ -0.39
CRNDE-209ENST00000560208 CCKP06307 115 aa12.61□□□□□ -0.39
CRNDE-209ENST00000560208 DSCR8Q96T75 97 aa12.61□□□□□ -0.39
CRNDE-209ENST00000560208 VPS25Q9BRG1 176 aa12.61□□□□□ -0.39
CRNDE-209ENST00000560208 PCOTHQ58A44 107 aa12.6□□□□□ -0.39
CRNDE-209ENST00000560208 COL5A1-AS1Q5SY13 56 aa12.59□□□□□ -0.39
CRNDE-209ENST00000560208 TRBV7-4A0A0J9YYF1 115 aa12.58□□□□□ -0.4
CRNDE-209ENST00000560208 LCE2BO14633 110 aa12.55□□□□□ -0.4
CRNDE-209ENST00000560208 MTURNQ8N3F0 131 aa12.55□□□□□ -0.4
CRNDE-209ENST00000560208 JMJD7-PLA2G4BH0Y9G9 81 aa12.53□□□□□ -0.4
CRNDE-209ENST00000560208 SPCS1Q9Y6A9 102 aa12.53□□□□□ -0.4
CRNDE-209ENST00000560208 LCE2CQ5TA81 110 aa12.49□□□□□ -0.41
CRNDE-209ENST00000560208 Q96NJ1 140 aa12.49□□□□□ -0.41
CRNDE-209ENST00000560208 C14orf132Q9NPU4 83 aa12.48□□□□□ -0.41
CRNDE-209ENST00000560208 H3BT86 120 aa12.47□□□□□ -0.41
CRNDE-209ENST00000560208 KRTAP19-2Q3LHN2 52 aa12.46□□□□□ -0.41
CRNDE-209ENST00000560208 SIGMAR1Q99720 223 aa12.46□□□□□ -0.41
CRNDE-209ENST00000560208 Q6ZQT0 140 aa12.44□□□□□ -0.42
CRNDE-209ENST00000560208 LOC110117498A0A087WWA1 95 aa12.43□□□□□ -0.42
CRNDE-209ENST00000560208 RPL37P61927 97 aaKnown RBP12.43□□□□□ -0.42
CRNDE-209ENST00000560208 DEFB116Q30KQ4 102 aa12.43□□□□□ -0.42
CRNDE-209ENST00000560208 OBSCN-AS1Q96MR7 158 aa12.43□□□□□ -0.42
CRNDE-209ENST00000560208 IGKV4-1P06312 121 aa12.42□□□□□ -0.42
CRNDE-209ENST00000560208 PDE6GP18545 87 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms