RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 LOC105371267A0A1B0GV96 52 aa10.57□□□□□ -0.72
CASC4-209ENST00000559222 IGLV7-46A0A075B6I9 117 aa10.56□□□□□ -0.72
CASC4-209ENST00000559222 TRIAP1O43715 76 aa10.56□□□□□ -0.72
CASC4-209ENST00000559222 SMIM6P0DI80 62 aa10.55□□□□□ -0.72
CASC4-209ENST00000559222 RPS29P62273 56 aaKnown RBP10.55□□□□□ -0.72
CASC4-209ENST00000559222 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.54□□□□□ -0.72
CASC4-209ENST00000559222 CLEC2BQ92478 149 aa10.51□□□□□ -0.73
CASC4-209ENST00000559222 H0YGX0 51 aa10.5□□□□□ -0.73
CASC4-209ENST00000559222 TPRXLQ17RH7 258 aa10.49□□□□□ -0.73
CASC4-209ENST00000559222 FP248Q71RG6 208 aaPredicted RBP10.48□□□□□ -0.73
CASC4-209ENST00000559222 LCE2DQ5TA82 110 aaPredicted RBP10.46□□□□□ -0.73
CASC4-209ENST00000559222 F8WEM9 126 aa10.45□□□□□ -0.74
CASC4-209ENST00000559222 PSMB2P49721 201 aa10.45□□□□□ -0.74
CASC4-209ENST00000559222 CD164Q04900 197 aa10.45□□□□□ -0.74
CASC4-209ENST00000559222 KRTAP13-3Q3SY46 172 aa10.45□□□□□ -0.74
CASC4-209ENST00000559222 IGLV8-61A0A075B6I0 122 aa10.44□□□□□ -0.74
CASC4-209ENST00000559222 H3BUT2 72 aa10.44□□□□□ -0.74
CASC4-209ENST00000559222 IGFL1Q6UW32 110 aa10.44□□□□□ -0.74
CASC4-209ENST00000559222 MUC17Q685J3 4493 aa10.43□□□□□ -0.74
CASC4-209ENST00000559222 LIMD2Q9BT23 127 aa10.43□□□□□ -0.74
CASC4-209ENST00000559222 OCIAD2Q56VL3 154 aa10.42□□□□□ -0.74
CASC4-209ENST00000559222 PPDPFLQ8WWR9 84 aa10.42□□□□□ -0.74
CASC4-209ENST00000559222 SNHG12Q9BXW3 62 aa10.41□□□□□ -0.74
CASC4-209ENST00000559222 CDIP1Q9H305 208 aa10.41□□□□□ -0.74
CASC4-209ENST00000559222 A0A1B0GX51 115 aa10.4□□□□□ -0.74
CASC4-209ENST00000559222 NAA38Q9BRA0 125 aaKnown RBP10.38□□□□□ -0.75
CASC4-209ENST00000559222 NDUFV3P56181 108 aaKnown RBP10.37□□□□□ -0.75
CASC4-209ENST00000559222 Q6JHZ5 121 aa10.37□□□□□ -0.75
CASC4-209ENST00000559222 M0R143 59 aa10.36□□□□□ -0.75
CASC4-209ENST00000559222 SNCGO76070 127 aa10.36□□□□□ -0.75
CASC4-209ENST00000559222 Q5XG85 94 aa10.36□□□□□ -0.75
CASC4-209ENST00000559222 FABP2P12104 132 aa10.35□□□□□ -0.75
CASC4-209ENST00000559222 C1orf195Q5TG92 126 aa10.35□□□□□ -0.75
CASC4-209ENST00000559222 TSTD3H0UI37 97 aa10.34□□□□□ -0.75
CASC4-209ENST00000559222 TRBV7-7A0A0K0K1E9 115 aa10.33□□□□□ -0.76
CASC4-209ENST00000559222 COX6CP09669 75 aa10.33□□□□□ -0.76
CASC4-209ENST00000559222 A0A1B0GV72 72 aa10.32□□□□□ -0.76
CASC4-209ENST00000559222 DNAL4O96015 105 aa10.31□□□□□ -0.76
CASC4-209ENST00000559222 ORMDL1Q9P0S3 153 aa10.31□□□□□ -0.76
CASC4-209ENST00000559222 H3BMG7 143 aa10.3□□□□□ -0.76
CASC4-209ENST00000559222 LST1O00453 97 aa10.3□□□□□ -0.76
CASC4-209ENST00000559222 SCGB1C2P0DMR2 95 aa10.3□□□□□ -0.76
CASC4-209ENST00000559222 BATFQ16520 125 aa10.29□□□□□ -0.76
CASC4-209ENST00000559222 KRTAP9-2Q9BYQ4 174 aa10.29□□□□□ -0.76
CASC4-209ENST00000559222 C9orf92A6NGG3 77 aa10.28□□□□□ -0.76
CASC4-209ENST00000559222 XP32Q5T750 250 aa10.28□□□□□ -0.76
CASC4-209ENST00000559222 TRACP01848 142 aa10.27□□□□□ -0.77
CASC4-209ENST00000559222 MUC2Q02817 5179 aa10.26□□□□□ -0.77
CASC4-209ENST00000559222 TCL1BO95988 128 aa10.26□□□□□ -0.77
CASC4-209ENST00000559222 A0A1W2PNM2 257 aa10.24□□□□□ -0.77
CASC4-209ENST00000559222 ASB16-AS1Q495Z4 193 aa10.23□□□□□ -0.77
CASC4-209ENST00000559222 Q6Q795 121 aa10.23□□□□□ -0.77
CASC4-209ENST00000559222 GHRHP01286 108 aa10.22□□□□□ -0.77
CASC4-209ENST00000559222 TMEM256-PLSCR3K7ERE1 68 aa10.21□□□□□ -0.77
CASC4-209ENST00000559222 TEN1Q86WV5 123 aa10.21□□□□□ -0.77
CASC4-209ENST00000559222 A0A087WSZ3 146 aa10.19□□□□□ -0.78
CASC4-209ENST00000559222 KRTAP4-1Q9BYQ7 146 aa10.19□□□□□ -0.78
CASC4-209ENST00000559222 UBE2V1Q13404 147 aa10.18□□□□□ -0.78
CASC4-209ENST00000559222 H3BQ85 93 aa10.17□□□□□ -0.78
CASC4-209ENST00000559222 TAX1BP3O14907 124 aa10.16□□□□□ -0.78
CASC4-209ENST00000559222 BAALC-AS2P0C853 105 aa10.16□□□□□ -0.78
CASC4-209ENST00000559222 ATXN8Q156A1 80 aa10.16□□□□□ -0.78
CASC4-209ENST00000559222 ANKRD29Q8N6D5 301 aa10.16□□□□□ -0.78
CASC4-209ENST00000559222 FAT4Q6V0I7 4981 aa10.15□□□□□ -0.78
CASC4-209ENST00000559222 KRTAP9-6A0A140TA67 174 aa10.15□□□□□ -0.78
CASC4-209ENST00000559222 Q96NJ1 140 aa10.14□□□□□ -0.79
CASC4-209ENST00000559222 TRBV7-4A0A0J9YYF1 115 aa10.12□□□□□ -0.79
CASC4-209ENST00000559222 C9orf118A6NHY6 69 aa10.11□□□□□ -0.79
CASC4-209ENST00000559222 SEC61BP60468 96 aaKnown RBP10.11□□□□□ -0.79
CASC4-209ENST00000559222 SS18L2Q9UHA2 77 aa10.11□□□□□ -0.79
CASC4-209ENST00000559222 CCKP06307 115 aa10.1□□□□□ -0.79
CASC4-209ENST00000559222 RBM3P98179 157 aaKnown RBP10.07□□□□□ -0.8
CASC4-209ENST00000559222 PCOTHQ58A44 107 aa10.07□□□□□ -0.8
CASC4-209ENST00000559222 A0A1W2PPM0 123 aa10.06□□□□□ -0.8
CASC4-209ENST00000559222 C9JAW5 83 aa10.06□□□□□ -0.8
CASC4-209ENST00000559222 LYRM7Q5U5X0 104 aa10.06□□□□□ -0.8
CASC4-209ENST00000559222 VPS25Q9BRG1 176 aa10.06□□□□□ -0.8
CASC4-209ENST00000559222 OBSCN-AS1Q96MR7 158 aa10.05□□□□□ -0.8
CASC4-209ENST00000559222 MTURNQ8N3F0 131 aa10.04□□□□□ -0.8
CASC4-209ENST00000559222 TRBV20-1A0A075B6N2 111 aa10.03□□□□□ -0.8
CASC4-209ENST00000559222 RPL37P61927 97 aaKnown RBP10.03□□□□□ -0.8
CASC4-209ENST00000559222 DEFB116Q30KQ4 102 aa10.02□□□□□ -0.81
CASC4-209ENST00000559222 DSCR8Q96T75 97 aa10.02□□□□□ -0.81
CASC4-209ENST00000559222 SIGMAR1Q99720 223 aa10□□□□□ -0.81
CASC4-209ENST00000559222 LINC00472Q9H8W2 130 aa9.99□□□□□ -0.81
CASC4-209ENST00000559222 A0A0U1RQV1 116 aa9.98□□□□□ -0.81
CASC4-209ENST00000559222 Q6ZQT0 140 aa9.98□□□□□ -0.81
CASC4-209ENST00000559222 C14orf132Q9NPU4 83 aa9.98□□□□□ -0.81
CASC4-209ENST00000559222 IGKV4-1P06312 121 aa9.97□□□□□ -0.81
CASC4-209ENST00000559222 DSCR10P59022 87 aa9.97□□□□□ -0.81
CASC4-209ENST00000559222 PCP4L1A6NKN8 68 aa9.96□□□□□ -0.82
CASC4-209ENST00000559222 LOC110117498A0A087WWA1 95 aa9.95□□□□□ -0.82
CASC4-209ENST00000559222 JMJD7-PLA2G4BH0Y9G9 81 aa9.95□□□□□ -0.82
CASC4-209ENST00000559222 COL5A1-AS1Q5SY13 56 aa9.94□□□□□ -0.82
CASC4-209ENST00000559222 SPCS1Q9Y6A9 102 aa9.94□□□□□ -0.82
CASC4-209ENST00000559222 H3BT86 120 aa9.92□□□□□ -0.82
CASC4-209ENST00000559222 NOTCH2NLQ7Z3S9 236 aa9.92□□□□□ -0.82
CASC4-209ENST00000559222 LCE2AQ5TA79 106 aaPredicted RBP9.91□□□□□ -0.82
CASC4-209ENST00000559222 Q75L30 129 aa9.9□□□□□ -0.82
CASC4-209ENST00000559222 SMCPP49901 116 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms