RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
CTDSPL2-206ENST00000559175 KCNQ1DNQ9H478 68 aa3.44□□□□□ -1.86
CTDSPL2-206ENST00000559175 SVEP1Q4LDE5 3571 aa3.44□□□□□ -1.86
CTDSPL2-206ENST00000559175 CCL19Q99731 98 aa3.44□□□□□ -1.86
CTDSPL2-206ENST00000559175 BOD1L1Q8NFC6 3051 aa3.43□□□□□ -1.86
CTDSPL2-206ENST00000559175 G3V318 75 aa3.43□□□□□ -1.86
CTDSPL2-206ENST00000559175 USMG5Q96IX5 58 aa3.43□□□□□ -1.86
CTDSPL2-206ENST00000559175 VPS13BQ7Z7G8 4022 aa3.42□□□□□ -1.86
CTDSPL2-206ENST00000559175 PKD1L2Q7Z442 2459 aa3.42□□□□□ -1.86
CTDSPL2-206ENST00000559175 IGKV2D-30A0A075B6S6 120 aa3.42□□□□□ -1.86
CTDSPL2-206ENST00000559175 H3BUX3 64 aa3.42□□□□□ -1.86
CTDSPL2-206ENST00000559175 BRD3OSQ6XYD6 125 aa3.42□□□□□ -1.86
CTDSPL2-206ENST00000559175 CEP295Q9C0D2 2601 aa3.42□□□□□ -1.86
CTDSPL2-206ENST00000559175 ZNF462Q96JM2 2506 aa3.42□□□□□ -1.86
CTDSPL2-206ENST00000559175 KRTAP24-1Q3LI83 254 aa3.42□□□□□ -1.86
CTDSPL2-206ENST00000559175 RHPN1-AS1Q9BWJ2 59 aa3.42□□□□□ -1.86
CTDSPL2-206ENST00000559175 IGF2RP11717 2491 aa3.41□□□□□ -1.86
CTDSPL2-206ENST00000559175 DNAH2Q9P225 4427 aa3.41□□□□□ -1.86
CTDSPL2-206ENST00000559175 MYO9AB2RTY4 2548 aa3.41□□□□□ -1.86
CTDSPL2-206ENST00000559175 C2CD3Q4AC94 2353 aa3.41□□□□□ -1.86
CTDSPL2-206ENST00000559175 DNHD1Q96M86 4753 aa3.4□□□□□ -1.86
CTDSPL2-206ENST00000559175 MGAQ8IWI9 3026 aa3.4□□□□□ -1.87
CTDSPL2-206ENST00000559175 PTPN13Q12923 2485 aa3.4□□□□□ -1.87
CTDSPL2-206ENST00000559175 IGKV2-28A0A075B6P5 120 aa3.4□□□□□ -1.87
CTDSPL2-206ENST00000559175 IGKV2D-28P01615 120 aa3.4□□□□□ -1.87
CTDSPL2-206ENST00000559175 POLR2KP53803 58 aaKnown RBP3.4□□□□□ -1.87
CTDSPL2-206ENST00000559175 DSPP15924 2871 aaKnown RBP3.39□□□□□ -1.87
CTDSPL2-206ENST00000559175 CDKN2A-AS1Q9UH64 79 aa3.39□□□□□ -1.87
CTDSPL2-206ENST00000559175 ANKRD11Q6UB99 2663 aaPredicted RBP3.39□□□□□ -1.87
CTDSPL2-206ENST00000559175 LINC00575Q6W349 94 aa3.39□□□□□ -1.87
CTDSPL2-206ENST00000559175 LINC00304Q8N9R0 145 aa3.39□□□□□ -1.87
CTDSPL2-206ENST00000559175 CELSR1Q9NYQ6 3014 aa3.39□□□□□ -1.87
CTDSPL2-206ENST00000559175 A0A0G2JQZ4 141 aa3.38□□□□□ -1.87
CTDSPL2-206ENST00000559175 ACYP2P14621 99 aa3.38□□□□□ -1.87
CTDSPL2-206ENST00000559175 DNAH8Q96JB1 4490 aa3.38□□□□□ -1.87
CTDSPL2-206ENST00000559175 A0A087WTM6 91 aa3.38□□□□□ -1.87
CTDSPL2-206ENST00000559175 NCOR2Q9Y618 2525 aa3.38□□□□□ -1.87
CTDSPL2-206ENST00000559175 NOTCH2Q04721 2471 aa3.38□□□□□ -1.87
CTDSPL2-206ENST00000559175 LINC00472Q9H8W2 130 aa3.37□□□□□ -1.87
CTDSPL2-206ENST00000559175 CSMD2Q7Z408 3487 aa3.37□□□□□ -1.87
CTDSPL2-206ENST00000559175 SPINK13Q1W4C9 94 aa3.37□□□□□ -1.87
CTDSPL2-206ENST00000559175 C4orf3Q8WVX3 66 aa3.37□□□□□ -1.87
CTDSPL2-206ENST00000559175 CHD6Q8TD26 2715 aa3.37□□□□□ -1.87
CTDSPL2-206ENST00000559175 FN1P02751 2386 aaKnown RBP3.37□□□□□ -1.87
CTDSPL2-206ENST00000559175 RPL37AP61513 92 aaKnown RBP3.37□□□□□ -1.87
CTDSPL2-206ENST00000559175 CRIPTQ9P021 101 aa3.37□□□□□ -1.87
CTDSPL2-206ENST00000559175 TOMM7Q9P0U1 55 aa3.37□□□□□ -1.87
CTDSPL2-206ENST00000559175 PKD1P98161 4303 aa3.36□□□□□ -1.87
CTDSPL2-206ENST00000559175 FAT3Q8TDW7 4589 aa3.36□□□□□ -1.87
CTDSPL2-206ENST00000559175 PCOTHQ58A44 107 aa3.36□□□□□ -1.87
CTDSPL2-206ENST00000559175 DOPEY1Q5JWR5 2465 aa3.36□□□□□ -1.87
CTDSPL2-206ENST00000559175 NBDYA0A0U1RRE5 68 aa3.36□□□□□ -1.87
CTDSPL2-206ENST00000559175 DEFB131AP59861 70 aa3.36□□□□□ -1.87
CTDSPL2-206ENST00000559175 NAV2Q8IVL1 2488 aa3.35□□□□□ -1.87
CTDSPL2-206ENST00000559175 WFDC13Q8IUB5 93 aa3.35□□□□□ -1.87
CTDSPL2-206ENST00000559175 USP9YO00507 2555 aaPredicted RBP3.35□□□□□ -1.87
CTDSPL2-206ENST00000559175 CCDC168Q8NDH2 2452 aa3.35□□□□□ -1.87
CTDSPL2-206ENST00000559175 Q96NJ1 140 aa3.35□□□□□ -1.87
CTDSPL2-206ENST00000559175 USP9XQ93008 2570 aaPredicted RBP3.34□□□□□ -1.87
CTDSPL2-206ENST00000559175 KMT2AQ03164 3969 aa3.34□□□□□ -1.87
CTDSPL2-206ENST00000559175 KRTAP10-9P60411 292 aa3.34□□□□□ -1.87
CTDSPL2-206ENST00000559175 COX17Q14061 63 aa3.34□□□□□ -1.87
CTDSPL2-206ENST00000559175 HRES1P13985 223 aa3.34□□□□□ -1.88
CTDSPL2-206ENST00000559175 WFDC10BQ8IUB3 73 aa3.34□□□□□ -1.88
CTDSPL2-206ENST00000559175 TLN2Q9Y4G6 2542 aa3.34□□□□□ -1.88
CTDSPL2-206ENST00000559175 LINC00315P59091 139 aa3.33□□□□□ -1.88
CTDSPL2-206ENST00000559175 UTP20O75691 2785 aaKnown RBP3.33□□□□□ -1.88
CTDSPL2-206ENST00000559175 CELSR2Q9HCU4 2923 aa3.33□□□□□ -1.88
CTDSPL2-206ENST00000559175 DEFB1P60022 68 aa3.33□□□□□ -1.88
CTDSPL2-206ENST00000559175 KRTAP7-1Q8IUC3 87 aa3.33□□□□□ -1.88
CTDSPL2-206ENST00000559175 SONP18583 2426 aaKnown RBP3.32□□□□□ -1.88
CTDSPL2-206ENST00000559175 HIVEP3Q5T1R4 2406 aa3.32□□□□□ -1.88
CTDSPL2-206ENST00000559175 SETD2Q9BYW2 2564 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL2-206ENST00000559175 KRTAP29-1A8MX34 341 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL2-206ENST00000559175 CRYBG3Q68DQ2 2970 aa3.32□□□□□ -1.88
CTDSPL2-206ENST00000559175 CHD8Q9HCK8 2581 aa3.31□□□□□ -1.88
CTDSPL2-206ENST00000559175 MAPK1IP1LQ8NDC0 245 aa3.31□□□□□ -1.88
CTDSPL2-206ENST00000559175 PRO2289Q9P1D8 64 aa3.31□□□□□ -1.88
CTDSPL2-206ENST00000559175 Q8IZM0 81 aa3.31□□□□□ -1.88
CTDSPL2-206ENST00000559175 CSMD1Q96PZ7 3565 aa3.3□□□□□ -1.88
CTDSPL2-206ENST00000559175 A0A1W2PNN7 141 aa3.3□□□□□ -1.88
CTDSPL2-206ENST00000559175 K7EQZ3 153 aa3.3□□□□□ -1.88
CTDSPL2-206ENST00000559175 BAHCC1Q9P281 2608 aa3.3□□□□□ -1.88
CTDSPL2-206ENST00000559175 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
CTDSPL2-206ENST00000559175 SPACA4Q8TDM5 124 aa3.29□□□□□ -1.88
CTDSPL2-206ENST00000559175 EPG5Q9HCE0 2579 aa3.28□□□□□ -1.88
CTDSPL2-206ENST00000559175 NF1P21359 2839 aa3.28□□□□□ -1.88
CTDSPL2-206ENST00000559175 HIVEP2P31629 2446 aa3.28□□□□□ -1.88
CTDSPL2-206ENST00000559175 DNAH10Q8IVF4 4471 aa3.28□□□□□ -1.88
CTDSPL2-206ENST00000559175 DEFB136Q30KP8 78 aa3.28□□□□□ -1.88
CTDSPL2-206ENST00000559175 FLNCQ14315 2725 aa3.28□□□□□ -1.88
CTDSPL2-206ENST00000559175 CSMD3Q7Z407 3707 aa3.28□□□□□ -1.88
CTDSPL2-206ENST00000559175 DEFB131BA0A096LNP1 70 aa3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 DEFB130BP0DP73 79 aa3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 DEFB130AP0DP74 79 aa3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 HTN3P15516 51 aa3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 PRR9Q5T870 116 aa3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 RYR2Q92736 4967 aa3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 LRBAP50851 2863 aa3.27□□□□□ -1.89
CTDSPL2-206ENST00000559175 ABCA12Q86UK0 2595 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms