RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 Q5VSD8 79 aa8.51□□□□□ -1.05
SPG11-210ENST00000558319 CELSR3Q9NYQ7 3312 aa8.5□□□□□ -1.05
SPG11-210ENST00000558319 HECTD1Q9ULT8 2610 aa8.48□□□□□ -1.05
SPG11-210ENST00000558319 R4GN34 69 aa8.48□□□□□ -1.05
SPG11-210ENST00000558319 SPATA8Q6RVD6 105 aa8.46□□□□□ -1.05
SPG11-210ENST00000558319 MGAM2Q2M2H8 2515 aa8.46□□□□□ -1.05
SPG11-210ENST00000558319 RPL37P61927 97 aaKnown RBP8.45□□□□□ -1.06
SPG11-210ENST00000558319 LINC00472Q9H8W2 130 aa8.44□□□□□ -1.06
SPG11-210ENST00000558319 LAMA3Q16787 3333 aa8.44□□□□□ -1.06
SPG11-210ENST00000558319 KRTAP10-2P60368 255 aa8.43□□□□□ -1.06
SPG11-210ENST00000558319 H1FX-AS1Q4G0G2 97 aa8.42□□□□□ -1.06
SPG11-210ENST00000558319 FREM2Q5SZK8 3169 aa8.42□□□□□ -1.06
SPG11-210ENST00000558319 KRTAP16-1A8MUX0 517 aa8.41□□□□□ -1.06
SPG11-210ENST00000558319 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.07
SPG11-210ENST00000558319 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
SPG11-210ENST00000558319 LAMA2P24043 3122 aaKnown RBP8.39□□□□□ -1.07
SPG11-210ENST00000558319 DNAH14Q0VDD8 3507 aa8.38□□□□□ -1.07
SPG11-210ENST00000558319 KRTAP26-1Q6PEX3 210 aa8.37□□□□□ -1.07
SPG11-210ENST00000558319 SPRR1AP35321 89 aa8.36□□□□□ -1.07
SPG11-210ENST00000558319 M0QZ58 72 aa8.36□□□□□ -1.07
SPG11-210ENST00000558319 A0A0C4DFX4 3053 aa8.35□□□□□ -1.07
SPG11-210ENST00000558319 PLAC8Q9NZF1 115 aa8.35□□□□□ -1.07
SPG11-210ENST00000558319 TRIOO75962 3097 aa8.35□□□□□ -1.07
SPG11-210ENST00000558319 SZT2Q5T011 3432 aa8.33□□□□□ -1.08
SPG11-210ENST00000558319 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
SPG11-210ENST00000558319 CDH23Q9H251 3354 aa8.33□□□□□ -1.08
SPG11-210ENST00000558319 UNC80Q8N2C7 3258 aa8.3□□□□□ -1.08
SPG11-210ENST00000558319 ADM2Q7Z4H4 148 aa8.3□□□□□ -1.08
SPG11-210ENST00000558319 CHD7Q9P2D1 2997 aa8.29□□□□□ -1.08
SPG11-210ENST00000558319 PANO1I0J062 215 aa8.28□□□□□ -1.08
SPG11-210ENST00000558319 EPG5Q9HCE0 2579 aa8.27□□□□□ -1.09
SPG11-210ENST00000558319 FLNBO75369 2602 aaKnown RBP8.27□□□□□ -1.09
SPG11-210ENST00000558319 SEC61BP60468 96 aaKnown RBP8.24□□□□□ -1.09
SPG11-210ENST00000558319 SPRR1BP22528 89 aa8.23□□□□□ -1.09
SPG11-210ENST00000558319 KRTAP25-1Q3LHN0 102 aa8.23□□□□□ -1.09
SPG11-210ENST00000558319 NDUFAF8A1L188 74 aa8.23□□□□□ -1.09
SPG11-210ENST00000558319 A8MU10 97 aa8.23□□□□□ -1.09
SPG11-210ENST00000558319 FLNAP21333 2647 aaKnown RBP8.22□□□□□ -1.09
SPG11-210ENST00000558319 A6NN06 94 aa8.22□□□□□ -1.09
SPG11-210ENST00000558319 ITPR3Q14573 2671 aa8.22□□□□□ -1.09
SPG11-210ENST00000558319 Q6ZR54 194 aa8.22□□□□□ -1.09
SPG11-210ENST00000558319 ATRQ13535 2644 aa8.21□□□□□ -1.1
SPG11-210ENST00000558319 PLAC4Q8WY50 150 aa8.21□□□□□ -1.1
SPG11-210ENST00000558319 RANBP2P49792 3224 aaKnown RBP8.21□□□□□ -1.1
SPG11-210ENST00000558319 ASB16-AS1Q495Z4 193 aa8.19□□□□□ -1.1
SPG11-210ENST00000558319 FLG2Q5D862 2391 aaPredicted RBP8.18□□□□□ -1.1
SPG11-210ENST00000558319 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
SPG11-210ENST00000558319 WDFY4Q6ZS81 3184 aa8.16□□□□□ -1.1
SPG11-210ENST00000558319 A0A087X002 238 aa8.16□□□□□ -1.1
SPG11-210ENST00000558319 LCE6AA0A183 80 aa8.16□□□□□ -1.1
SPG11-210ENST00000558319 MGAQ8IWI9 3026 aa8.15□□□□□ -1.1
SPG11-210ENST00000558319 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.1
SPG11-210ENST00000558319 VPS13AQ96RL7 3174 aa8.15□□□□□ -1.11
SPG11-210ENST00000558319 KRTAP29-1A8MX34 341 aaPredicted RBP8.14□□□□□ -1.11
SPG11-210ENST00000558319 COL6A3P12111 3177 aa8.11□□□□□ -1.11
SPG11-210ENST00000558319 REV3LO60673 3130 aa8.1□□□□□ -1.11
SPG11-210ENST00000558319 HTTP42858 3142 aa8.07□□□□□ -1.12
SPG11-210ENST00000558319 CFAP46Q8IYW2 2715 aa8.07□□□□□ -1.12
SPG11-210ENST00000558319 AKAP13Q12802 2813 aa8.07□□□□□ -1.12
SPG11-210ENST00000558319 MAST4O15021 2626 aa8.07□□□□□ -1.12
SPG11-210ENST00000558319 CHD6Q8TD26 2715 aa8.03□□□□□ -1.12
SPG11-210ENST00000558319 KRTAP11-1Q8IUC1 163 aa8.03□□□□□ -1.12
SPG11-210ENST00000558319 KRTAP4-16G5E9R7 235 aaPredicted RBP8.02□□□□□ -1.13
SPG11-210ENST00000558319 CFAP47Q6ZTR5 3102 aa8.02□□□□□ -1.13
SPG11-210ENST00000558319 VCANP13611 3396 aa8□□□□□ -1.13
SPG11-210ENST00000558319 HELZ2Q9BYK8 2649 aaKnown RBP8□□□□□ -1.13
SPG11-210ENST00000558319 TEX15Q9BXT5 2789 aa7.99□□□□□ -1.13
SPG11-210ENST00000558319 FRYQ5TBA9 3013 aa7.96□□□□□ -1.13
SPG11-210ENST00000558319 C10orf95Q9H7T3 257 aa7.95□□□□□ -1.14
SPG11-210ENST00000558319 SPEGQ15772 3267 aa7.95□□□□□ -1.14
SPG11-210ENST00000558319 A8MUU9 505 aa7.94□□□□□ -1.14
SPG11-210ENST00000558319 DMBT1Q9UGM3 2413 aaPredicted RBP7.91□□□□□ -1.14
SPG11-210ENST00000558319 CENPEQ02224 2701 aa7.9□□□□□ -1.15
SPG11-210ENST00000558319 TEP1Q99973 2627 aaKnown RBP7.89□□□□□ -1.15
SPG11-210ENST00000558319 A0A1B0GVY2 172 aa7.89□□□□□ -1.15
SPG11-210ENST00000558319 CRYBG3Q68DQ2 2970 aa7.87□□□□□ -1.15
SPG11-210ENST00000558319 NBEAL1Q6ZS30 2694 aa7.87□□□□□ -1.15
SPG11-210ENST00000558319 CHD9Q3L8U1 2897 aa7.85□□□□□ -1.15
SPG11-210ENST00000558319 LAMA1P25391 3075 aa7.8□□□□□ -1.16
SPG11-210ENST00000558319 STAB1Q9NY15 2570 aa7.8□□□□□ -1.16
SPG11-210ENST00000558319 NBEAL2Q6ZNJ1 2754 aa7.8□□□□□ -1.16
SPG11-210ENST00000558319 KALRNO60229 2985 aa7.79□□□□□ -1.16
SPG11-210ENST00000558319 USP34Q70CQ2 3546 aa7.77□□□□□ -1.17
SPG11-210ENST00000558319 SPTBN5Q9NRC6 3674 aaKnown RBP7.76□□□□□ -1.17
SPG11-210ENST00000558319 KRTAP13-2Q52LG2 175 aa7.76□□□□□ -1.17
SPG11-210ENST00000558319 GCN1Q92616 2671 aaKnown RBP7.75□□□□□ -1.17
SPG11-210ENST00000558319 KRTAP7-1Q8IUC3 87 aa7.75□□□□□ -1.17
SPG11-210ENST00000558319 MYO15AQ9UKN7 3530 aa7.74□□□□□ -1.17
SPG11-210ENST00000558319 MAP1AP78559 2803 aaPredicted RBP7.73□□□□□ -1.17
SPG11-210ENST00000558319 TNP1P09430 55 aa7.73□□□□□ -1.17
SPG11-210ENST00000558319 COL6A5A8TX70 2615 aa7.72□□□□□ -1.17
SPG11-210ENST00000558319 DMXL2Q8TDJ6 3036 aa7.72□□□□□ -1.17
SPG11-210ENST00000558319 SETXQ7Z333 2677 aaKnown RBP7.71□□□□□ -1.18
SPG11-210ENST00000558319 UNC79Q9P2D8 2635 aa7.7□□□□□ -1.18
SPG11-210ENST00000558319 TRANK1O15050 2925 aa7.68□□□□□ -1.18
SPG11-210ENST00000558319 Q6ZRN7 208 aaPredicted RBP7.67□□□□□ -1.18
SPG11-210ENST00000558319 BOD1L1Q8NFC6 3051 aa7.67□□□□□ -1.18
SPG11-210ENST00000558319 LRBAP50851 2863 aa7.67□□□□□ -1.18
SPG11-210ENST00000558319 DSPP15924 2871 aaKnown RBP7.65□□□□□ -1.18
SPG11-210ENST00000558319 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms