RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 ST20-AS1Q8NBB2 130 aa7.17□□□□□ -1.26
HMGB1P8-201ENST00000558211 SPRR4Q96PI1 79 aa7.17□□□□□ -1.26
HMGB1P8-201ENST00000558211 FAT3Q8TDW7 4589 aa7.17□□□□□ -1.26
HMGB1P8-201ENST00000558211 LRP1Q07954 4544 aaKnown RBP7.16□□□□□ -1.26
HMGB1P8-201ENST00000558211 SLC25A20O43772 301 aa7.16□□□□□ -1.26
HMGB1P8-201ENST00000558211 OXTP01178 125 aa7.16□□□□□ -1.26
HMGB1P8-201ENST00000558211 LINC01600Q96MT4 127 aa7.16□□□□□ -1.26
HMGB1P8-201ENST00000558211 ZNF706Q9Y5V0 76 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P8-201ENST00000558211 PCP4L1A6NKN8 68 aa7.15□□□□□ -1.26
HMGB1P8-201ENST00000558211 KRTAP29-1A8MX34 341 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P8-201ENST00000558211 TSPAN13O95857 204 aa7.15□□□□□ -1.26
HMGB1P8-201ENST00000558211 MYCBP2O75592 4640 aa7.15□□□□□ -1.27
HMGB1P8-201ENST00000558211 UBE2V1Q13404 147 aa7.14□□□□□ -1.27
HMGB1P8-201ENST00000558211 LINC00575Q6W349 94 aa7.14□□□□□ -1.27
HMGB1P8-201ENST00000558211 DEFB105AQ8NG35 78 aa7.14□□□□□ -1.27
HMGB1P8-201ENST00000558211 hADV29S1A0JD25 119 aa7.13□□□□□ -1.27
HMGB1P8-201ENST00000558211 CRYGAP11844 174 aa7.13□□□□□ -1.27
HMGB1P8-201ENST00000558211 A0A087X002 238 aa7.12□□□□□ -1.27
HMGB1P8-201ENST00000558211 H0YGX0 51 aa7.12□□□□□ -1.27
HMGB1P8-201ENST00000558211 KRTAP5-3Q6L8H2 238 aa7.12□□□□□ -1.27
HMGB1P8-201ENST00000558211 NAA38Q9BRA0 125 aaKnown RBP7.12□□□□□ -1.27
HMGB1P8-201ENST00000558211 COX6CP09669 75 aa7.11□□□□□ -1.27
HMGB1P8-201ENST00000558211 SCGB1C2P0DMR2 95 aa7.11□□□□□ -1.27
HMGB1P8-201ENST00000558211 MT1HL1P0DM35 61 aa7.1□□□□□ -1.27
HMGB1P8-201ENST00000558211 FAM229BQ4G0N7 80 aa7.1□□□□□ -1.27
HMGB1P8-201ENST00000558211 CLEC2BQ92478 149 aa7.1□□□□□ -1.27
HMGB1P8-201ENST00000558211 FAM218AQ96MZ4 157 aa7.1□□□□□ -1.27
HMGB1P8-201ENST00000558211 IGLV9-49A0A0B4J1Y8 123 aa7.09□□□□□ -1.27
HMGB1P8-201ENST00000558211 SNCGO76070 127 aa7.09□□□□□ -1.27
HMGB1P8-201ENST00000558211 KRTAP10-8P60410 259 aa7.09□□□□□ -1.27
HMGB1P8-201ENST00000558211 KRTAP13-2Q52LG2 175 aa7.09□□□□□ -1.27
HMGB1P8-201ENST00000558211 Q6ZQY7 126 aa7.09□□□□□ -1.27
HMGB1P8-201ENST00000558211 Q75L30 129 aa7.09□□□□□ -1.27
HMGB1P8-201ENST00000558211 C3orf22Q8N5N4 141 aa7.09□□□□□ -1.27
HMGB1P8-201ENST00000558211 TYMSOSQ8TAI1 123 aa7.09□□□□□ -1.27
HMGB1P8-201ENST00000558211 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
HMGB1P8-201ENST00000558211 SNHG12Q9BXW3 62 aa7.08□□□□□ -1.28
HMGB1P8-201ENST00000558211 TEX49A0A1B0GTD5 131 aa7.07□□□□□ -1.28
HMGB1P8-201ENST00000558211 TNXBP22105 4242 aa7.06□□□□□ -1.28
HMGB1P8-201ENST00000558211 LINC01547P58512 204 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P8-201ENST00000558211 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P8-201ENST00000558211 H3BUT2 72 aa7.05□□□□□ -1.28
HMGB1P8-201ENST00000558211 SPRR1BP22528 89 aa7.05□□□□□ -1.28
HMGB1P8-201ENST00000558211 MOBPQ13875 183 aa7.05□□□□□ -1.28
HMGB1P8-201ENST00000558211 LCE1AQ5T7P2 110 aa7.05□□□□□ -1.28
HMGB1P8-201ENST00000558211 C9orf153Q5TBE3 101 aa7.05□□□□□ -1.28
HMGB1P8-201ENST00000558211 Q8N377 158 aa7.05□□□□□ -1.28
HMGB1P8-201ENST00000558211 LAMTOR3Q9UHA4 124 aa7.05□□□□□ -1.28
HMGB1P8-201ENST00000558211 IGLV5-48A0A075B6I7 105 aa7.04□□□□□ -1.28
HMGB1P8-201ENST00000558211 A0A1B0GX51 115 aa7.03□□□□□ -1.28
HMGB1P8-201ENST00000558211 TAX1BP3O14907 124 aa7.03□□□□□ -1.28
HMGB1P8-201ENST00000558211 DNAL4O96015 105 aa7.03□□□□□ -1.28
HMGB1P8-201ENST00000558211 DMBT1Q9UGM3 2413 aaPredicted RBP7.02□□□□□ -1.28
HMGB1P8-201ENST00000558211 SMIM29Q86T20 159 aa7.02□□□□□ -1.29
HMGB1P8-201ENST00000558211 Q8NBF4 154 aa7.01□□□□□ -1.29
HMGB1P8-201ENST00000558211 LST1O00453 97 aa7□□□□□ -1.29
HMGB1P8-201ENST00000558211 TCL1BO95988 128 aa7□□□□□ -1.29
HMGB1P8-201ENST00000558211 FABP2P12104 132 aa7□□□□□ -1.29
HMGB1P8-201ENST00000558211 OCIAD2Q56VL3 154 aa7□□□□□ -1.29
HMGB1P8-201ENST00000558211 COL5A1-AS1Q5SY13 56 aa7□□□□□ -1.29
HMGB1P8-201ENST00000558211 LINC00304Q8N9R0 145 aa7□□□□□ -1.29
HMGB1P8-201ENST00000558211 F8WEM9 126 aa6.99□□□□□ -1.29
HMGB1P8-201ENST00000558211 LYRM7Q5U5X0 104 aa6.99□□□□□ -1.29
HMGB1P8-201ENST00000558211 SSBP3-AS1Q7Z2R9 100 aa6.99□□□□□ -1.29
HMGB1P8-201ENST00000558211 ORMDL1Q9P0S3 153 aa6.99□□□□□ -1.29
HMGB1P8-201ENST00000558211 TRACP01848 142 aa6.98□□□□□ -1.29
HMGB1P8-201ENST00000558211 ATXN8Q156A1 80 aa6.98□□□□□ -1.29
HMGB1P8-201ENST00000558211 A0A1W2PPM0 123 aa6.97□□□□□ -1.29
HMGB1P8-201ENST00000558211 PPDPFLQ8WWR9 84 aa6.97□□□□□ -1.29
HMGB1P8-201ENST00000558211 A0A0G2JQZ4 141 aa6.96□□□□□ -1.3
HMGB1P8-201ENST00000558211 HRCT1Q6UXD1 115 aa6.96□□□□□ -1.3
HMGB1P8-201ENST00000558211 NDUFV3P56181 108 aaKnown RBP6.95□□□□□ -1.3
HMGB1P8-201ENST00000558211 TRBV20-1A0A075B6N2 111 aa6.94□□□□□ -1.3
HMGB1P8-201ENST00000558211 A0A1B0GV72 72 aa6.94□□□□□ -1.3
HMGB1P8-201ENST00000558211 BAALC-AS2P0C853 105 aa6.94□□□□□ -1.3
HMGB1P8-201ENST00000558211 TMEM256-PLSCR3K7ERE1 68 aa6.93□□□□□ -1.3
HMGB1P8-201ENST00000558211 SPAG11AQ6PDA7 123 aa6.93□□□□□ -1.3
HMGB1P8-201ENST00000558211 H3BMG7 143 aa6.92□□□□□ -1.3
HMGB1P8-201ENST00000558211 H3BQ85 93 aa6.92□□□□□ -1.3
HMGB1P8-201ENST00000558211 C9JAW5 83 aa6.91□□□□□ -1.3
HMGB1P8-201ENST00000558211 SPCS1Q9Y6A9 102 aa6.91□□□□□ -1.3
HMGB1P8-201ENST00000558211 SPINK1P00995 79 aa6.9□□□□□ -1.3
HMGB1P8-201ENST00000558211 IGFL1Q6UW32 110 aa6.9□□□□□ -1.3
HMGB1P8-201ENST00000558211 HERC1Q15751 4861 aa6.89□□□□□ -1.31
HMGB1P8-201ENST00000558211 IGLV8-61A0A075B6I0 122 aa6.89□□□□□ -1.31
HMGB1P8-201ENST00000558211 Q6JHZ5 121 aa6.89□□□□□ -1.31
HMGB1P8-201ENST00000558211 MTURNQ8N3F0 131 aa6.89□□□□□ -1.31
HMGB1P8-201ENST00000558211 ANKRD29Q8N6D5 301 aa6.89□□□□□ -1.31
HMGB1P8-201ENST00000558211 RETNLBQ9BQ08 111 aa6.88□□□□□ -1.31
HMGB1P8-201ENST00000558211 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
HMGB1P8-201ENST00000558211 CD164Q04900 197 aa6.85□□□□□ -1.31
HMGB1P8-201ENST00000558211 PRR4Q16378 134 aa6.85□□□□□ -1.31
HMGB1P8-201ENST00000558211 K7EP34 96 aa6.84□□□□□ -1.31
HMGB1P8-201ENST00000558211 RBM3P98179 157 aaKnown RBP6.84□□□□□ -1.31
HMGB1P8-201ENST00000558211 IGKV2D-30A0A075B6S6 120 aa6.83□□□□□ -1.32
HMGB1P8-201ENST00000558211 LIMD2Q9BT23 127 aa6.83□□□□□ -1.32
HMGB1P8-201ENST00000558211 H3BT86 120 aa6.82□□□□□ -1.32
HMGB1P8-201ENST00000558211 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
HMGB1P8-201ENST00000558211 GTF2H5Q6ZYL4 71 aa6.82□□□□□ -1.32
HMGB1P8-201ENST00000558211 DSCR8Q96T75 97 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms