RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 DNAL4O96015 105 aa6.15□□□□□ -1.42
LRRC28-204ENST00000558172 LYRM7Q5U5X0 104 aa6.15□□□□□ -1.42
LRRC28-204ENST00000558172 CLEC2BQ92478 149 aa6.15□□□□□ -1.42
LRRC28-204ENST00000558172 IGLV9-49A0A0B4J1Y8 123 aa6.14□□□□□ -1.43
LRRC28-204ENST00000558172 PCP4L1A6NKN8 68 aa6.14□□□□□ -1.43
LRRC28-204ENST00000558172 H3BQ85 93 aa6.14□□□□□ -1.43
LRRC28-204ENST00000558172 LCE2BO14633 110 aa6.14□□□□□ -1.43
LRRC28-204ENST00000558172 SMIM29Q86T20 159 aa6.14□□□□□ -1.43
LRRC28-204ENST00000558172 SNHG12Q9BXW3 62 aa6.14□□□□□ -1.43
LRRC28-204ENST00000558172 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
LRRC28-204ENST00000558172 LST1O00453 97 aa6.13□□□□□ -1.43
LRRC28-204ENST00000558172 TRACP01848 142 aa6.13□□□□□ -1.43
LRRC28-204ENST00000558172 MOBPQ13875 183 aa6.13□□□□□ -1.43
LRRC28-204ENST00000558172 C9orf153Q5TBE3 101 aa6.13□□□□□ -1.43
LRRC28-204ENST00000558172 Q8NBF4 154 aa6.13□□□□□ -1.43
LRRC28-204ENST00000558172 TAX1BP3O14907 124 aa6.12□□□□□ -1.43
LRRC28-204ENST00000558172 C4orf48Q5BLP8 95 aa6.12□□□□□ -1.43
LRRC28-204ENST00000558172 COL5A1-AS1Q5SY13 56 aa6.12□□□□□ -1.43
LRRC28-204ENST00000558172 SPAG11AQ6PDA7 123 aa6.12□□□□□ -1.43
LRRC28-204ENST00000558172 LINC00304Q8N9R0 145 aa6.12□□□□□ -1.43
LRRC28-204ENST00000558172 F8WEM9 126 aa6.11□□□□□ -1.43
LRRC28-204ENST00000558172 H3BUT2 72 aa6.11□□□□□ -1.43
LRRC28-204ENST00000558172 ATXN8Q156A1 80 aa6.11□□□□□ -1.43
LRRC28-204ENST00000558172 NAA38Q9BRA0 125 aaKnown RBP6.11□□□□□ -1.43
LRRC28-204ENST00000558172 ORMDL1Q9P0S3 153 aa6.11□□□□□ -1.43
LRRC28-204ENST00000558172 TRBV20-1A0A075B6N2 111 aa6.1□□□□□ -1.43
LRRC28-204ENST00000558172 TMEM256-PLSCR3K7ERE1 68 aa6.09□□□□□ -1.43
LRRC28-204ENST00000558172 TCL1BO95988 128 aa6.09□□□□□ -1.43
LRRC28-204ENST00000558172 HERC1Q15751 4861 aa6.09□□□□□ -1.44
LRRC28-204ENST00000558172 A0A1W2PPM0 123 aa6.08□□□□□ -1.44
LRRC28-204ENST00000558172 SPINK1P00995 79 aa6.08□□□□□ -1.44
LRRC28-204ENST00000558172 FABP2P12104 132 aa6.08□□□□□ -1.44
LRRC28-204ENST00000558172 IGLV8-61A0A075B6I0 122 aa6.07□□□□□ -1.44
LRRC28-204ENST00000558172 NDUFV3P56181 108 aaKnown RBP6.07□□□□□ -1.44
LRRC28-204ENST00000558172 Q6JHZ5 121 aa6.07□□□□□ -1.44
LRRC28-204ENST00000558172 UBE2V1Q13404 147 aa6.06□□□□□ -1.44
LRRC28-204ENST00000558172 RPS29P62273 56 aaKnown RBP6.05□□□□□ -1.44
LRRC28-204ENST00000558172 CD164Q04900 197 aa6.05□□□□□ -1.44
LRRC28-204ENST00000558172 BAALC-AS2P0C853 105 aa6.04□□□□□ -1.44
LRRC28-204ENST00000558172 H3BMG7 143 aa6.03□□□□□ -1.44
LRRC28-204ENST00000558172 IGFL1Q6UW32 110 aa6.02□□□□□ -1.45
LRRC28-204ENST00000558172 ANKRD29Q8N6D5 301 aa6.01□□□□□ -1.45
LRRC28-204ENST00000558172 LIMD2Q9BT23 127 aa6.01□□□□□ -1.45
LRRC28-204ENST00000558172 SPCS1Q9Y6A9 102 aa6.01□□□□□ -1.45
LRRC28-204ENST00000558172 C9JAW5 83 aa6□□□□□ -1.45
LRRC28-204ENST00000558172 HRCT1Q6UXD1 115 aa6□□□□□ -1.45
LRRC28-204ENST00000558172 JMJD7-PLA2G4BH0Y9G9 81 aa5.99□□□□□ -1.45
LRRC28-204ENST00000558172 RBM3P98179 157 aaKnown RBP5.99□□□□□ -1.45
LRRC28-204ENST00000558172 Q5XG85 94 aa5.99□□□□□ -1.45
LRRC28-204ENST00000558172 A0A0G2JQZ4 141 aa5.98□□□□□ -1.45
LRRC28-204ENST00000558172 H3BT86 120 aa5.98□□□□□ -1.45
LRRC28-204ENST00000558172 Q6Q795 121 aa5.98□□□□□ -1.45
LRRC28-204ENST00000558172 TEN1Q86WV5 123 aa5.98□□□□□ -1.45
LRRC28-204ENST00000558172 K7EP34 96 aa5.97□□□□□ -1.45
LRRC28-204ENST00000558172 GTF2H5Q6ZYL4 71 aa5.97□□□□□ -1.45
LRRC28-204ENST00000558172 DSCR8Q96T75 97 aa5.97□□□□□ -1.45
LRRC28-204ENST00000558172 TRBV7-7A0A0K0K1E9 115 aa5.96□□□□□ -1.46
LRRC28-204ENST00000558172 HMCN2Q8NDA2 5059 aa5.96□□□□□ -1.46
LRRC28-204ENST00000558172 TRBV7-4A0A0J9YYF1 115 aa5.95□□□□□ -1.46
LRRC28-204ENST00000558172 PRR4Q16378 134 aa5.95□□□□□ -1.46
LRRC28-204ENST00000558172 FP248Q71RG6 208 aaPredicted RBP5.95□□□□□ -1.46
LRRC28-204ENST00000558172 A0A1B0GV72 72 aa5.94□□□□□ -1.46
LRRC28-204ENST00000558172 PDE6GP18545 87 aa5.94□□□□□ -1.46
LRRC28-204ENST00000558172 RETNLBQ9BQ08 111 aa5.94□□□□□ -1.46
LRRC28-204ENST00000558172 C21orf62-AS1Q17RA5 79 aa5.93□□□□□ -1.46
LRRC28-204ENST00000558172 ASB16-AS1Q495Z4 193 aa5.93□□□□□ -1.46
LRRC28-204ENST00000558172 SS18L2Q9UHA2 77 aa5.93□□□□□ -1.46
LRRC28-204ENST00000558172 A0A1W2PNM2 257 aa5.92□□□□□ -1.46
LRRC28-204ENST00000558172 CCKP06307 115 aa5.92□□□□□ -1.46
LRRC28-204ENST00000558172 OBSCN-AS1Q96MR7 158 aa5.92□□□□□ -1.46
LRRC28-204ENST00000558172 IGLV7-46A0A075B6I9 117 aa5.91□□□□□ -1.46
LRRC28-204ENST00000558172 LOC110117498A0A087WWA1 95 aa5.91□□□□□ -1.46
LRRC28-204ENST00000558172 MTURNQ8N3F0 131 aa5.91□□□□□ -1.46
LRRC28-204ENST00000558172 A0A087WSZ3 146 aa5.9□□□□□ -1.46
LRRC28-204ENST00000558172 A0A1B0GW54 56 aa5.9□□□□□ -1.46
LRRC28-204ENST00000558172 F8W1H4 67 aa5.89□□□□□ -1.47
LRRC28-204ENST00000558172 SMCPP49901 116 aaPredicted RBP5.89□□□□□ -1.47
LRRC28-204ENST00000558172 C1orf195Q5TG92 126 aa5.89□□□□□ -1.47
LRRC28-204ENST00000558172 VPS25Q9BRG1 176 aa5.89□□□□□ -1.47
LRRC28-204ENST00000558172 PRO0461Q9UI25 63 aa5.89□□□□□ -1.47
LRRC28-204ENST00000558172 Q6ZQT0 140 aa5.88□□□□□ -1.47
LRRC28-204ENST00000558172 C14orf132Q9NPU4 83 aa5.88□□□□□ -1.47
LRRC28-204ENST00000558172 TPRXLQ17RH7 258 aa5.86□□□□□ -1.47
LRRC28-204ENST00000558172 LPAP08519 4548 aa5.86□□□□□ -1.47
LRRC28-204ENST00000558172 LRP2P98164 4655 aa5.84□□□□□ -1.48
LRRC28-204ENST00000558172 LCE2AQ5TA79 106 aaPredicted RBP5.83□□□□□ -1.48
LRRC28-204ENST00000558172 A0A1B0GV90 55 aa5.82□□□□□ -1.48
LRRC28-204ENST00000558172 KRTAP13-3Q3SY46 172 aa5.82□□□□□ -1.48
LRRC28-204ENST00000558172 CDIP1Q9H305 208 aa5.82□□□□□ -1.48
LRRC28-204ENST00000558172 Q96NJ1 140 aa5.81□□□□□ -1.48
LRRC28-204ENST00000558172 LINC00472Q9H8W2 130 aa5.81□□□□□ -1.48
LRRC28-204ENST00000558172 ETDBQ3ZM63 59 aa5.8□□□□□ -1.48
LRRC28-204ENST00000558172 J3KT08 172 aa5.78□□□□□ -1.48
LRRC28-204ENST00000558172 IGKV4-1P06312 121 aa5.78□□□□□ -1.48
LRRC28-204ENST00000558172 NREPQ16612 68 aa5.78□□□□□ -1.48
LRRC28-204ENST00000558172 SIGMAR1Q99720 223 aa5.77□□□□□ -1.49
LRRC28-204ENST00000558172 C9orf92A6NGG3 77 aa5.75□□□□□ -1.49
LRRC28-204ENST00000558172 DEFB116Q30KQ4 102 aa5.75□□□□□ -1.49
LRRC28-204ENST00000558172 MUC17Q685J3 4493 aa5.74□□□□□ -1.49
LRRC28-204ENST00000558172 UBR4Q5T4S7 5183 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms