RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 TSTD3H0UI37 97 aa8.27□□□□□ -1.09
USP3-205ENST00000557884 TRIAP1O43715 76 aa8.27□□□□□ -1.09
USP3-205ENST00000557884 SPAG11AQ6PDA7 123 aa8.27□□□□□ -1.09
USP3-205ENST00000557884 FAM218AQ96MZ4 157 aa8.27□□□□□ -1.09
USP3-205ENST00000557884 LRP2P98164 4655 aa8.26□□□□□ -1.09
USP3-205ENST00000557884 H0YGX0 51 aa8.26□□□□□ -1.09
USP3-205ENST00000557884 PRR4Q16378 134 aa8.26□□□□□ -1.09
USP3-205ENST00000557884 SMIM29Q86T20 159 aa8.26□□□□□ -1.09
USP3-205ENST00000557884 PSMB2P49721 201 aa8.25□□□□□ -1.09
USP3-205ENST00000557884 RETNLBQ9BQ08 111 aa8.25□□□□□ -1.09
USP3-205ENST00000557884 LPAP08519 4548 aa8.24□□□□□ -1.09
USP3-205ENST00000557884 M0R143 59 aa8.24□□□□□ -1.09
USP3-205ENST00000557884 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.24□□□□□ -1.09
USP3-205ENST00000557884 CLEC2BQ92478 149 aa8.23□□□□□ -1.09
USP3-205ENST00000557884 SNCGO76070 127 aa8.22□□□□□ -1.09
USP3-205ENST00000557884 SPINK1P00995 79 aa8.21□□□□□ -1.1
USP3-205ENST00000557884 HRCT1Q6UXD1 115 aa8.21□□□□□ -1.1
USP3-205ENST00000557884 A0A0G2JQZ4 141 aa8.2□□□□□ -1.1
USP3-205ENST00000557884 F8WEM9 126 aa8.19□□□□□ -1.1
USP3-205ENST00000557884 COX6CP09669 75 aa8.19□□□□□ -1.1
USP3-205ENST00000557884 BATFQ16520 125 aa8.19□□□□□ -1.1
USP3-205ENST00000557884 A0A1B0GX51 115 aa8.17□□□□□ -1.1
USP3-205ENST00000557884 SCGB1C2P0DMR2 95 aa8.17□□□□□ -1.1
USP3-205ENST00000557884 SNHG12Q9BXW3 62 aa8.17□□□□□ -1.1
USP3-205ENST00000557884 OCIAD2Q56VL3 154 aa8.16□□□□□ -1.1
USP3-205ENST00000557884 PPDPFLQ8WWR9 84 aa8.16□□□□□ -1.1
USP3-205ENST00000557884 NAA38Q9BRA0 125 aaKnown RBP8.16□□□□□ -1.1
USP3-205ENST00000557884 UBR4Q5T4S7 5183 aa8.15□□□□□ -1.11
USP3-205ENST00000557884 DNAL4O96015 105 aa8.14□□□□□ -1.11
USP3-205ENST00000557884 RPS29P62273 56 aaKnown RBP8.14□□□□□ -1.11
USP3-205ENST00000557884 H3BUT2 72 aa8.13□□□□□ -1.11
USP3-205ENST00000557884 FABP2P12104 132 aa8.13□□□□□ -1.11
USP3-205ENST00000557884 IGLV7-46A0A075B6I9 117 aa8.12□□□□□ -1.11
USP3-205ENST00000557884 IGLV8-61A0A075B6I0 122 aa8.11□□□□□ -1.11
USP3-205ENST00000557884 NDUFV3P56181 108 aaKnown RBP8.11□□□□□ -1.11
USP3-205ENST00000557884 CD164Q04900 197 aa8.11□□□□□ -1.11
USP3-205ENST00000557884 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
USP3-205ENST00000557884 ORMDL1Q9P0S3 153 aa8.11□□□□□ -1.11
USP3-205ENST00000557884 LST1O00453 97 aa8.1□□□□□ -1.11
USP3-205ENST00000557884 Q6JHZ5 121 aa8.1□□□□□ -1.11
USP3-205ENST00000557884 IGFL1Q6UW32 110 aa8.1□□□□□ -1.11
USP3-205ENST00000557884 GHRHP01286 108 aa8.09□□□□□ -1.11
USP3-205ENST00000557884 TRACP01848 142 aa8.08□□□□□ -1.12
USP3-205ENST00000557884 FP248Q71RG6 208 aaPredicted RBP8.08□□□□□ -1.12
USP3-205ENST00000557884 A0A1B0GV72 72 aa8.07□□□□□ -1.12
USP3-205ENST00000557884 H3BMG7 143 aa8.06□□□□□ -1.12
USP3-205ENST00000557884 TCL1BO95988 128 aa8.05□□□□□ -1.12
USP3-205ENST00000557884 H3BQ85 93 aa8.04□□□□□ -1.12
USP3-205ENST00000557884 TMEM256-PLSCR3K7ERE1 68 aa8.04□□□□□ -1.12
USP3-205ENST00000557884 TAX1BP3O14907 124 aa8.03□□□□□ -1.12
USP3-205ENST00000557884 ATXN8Q156A1 80 aa8.03□□□□□ -1.12
USP3-205ENST00000557884 TPRXLQ17RH7 258 aa8.03□□□□□ -1.12
USP3-205ENST00000557884 TRBV7-7A0A0K0K1E9 115 aa8.02□□□□□ -1.13
USP3-205ENST00000557884 Q5XG85 94 aa8.02□□□□□ -1.13
USP3-205ENST00000557884 C9orf118A6NHY6 69 aa8.01□□□□□ -1.13
USP3-205ENST00000557884 BAALC-AS2P0C853 105 aa8.01□□□□□ -1.13
USP3-205ENST00000557884 LYRM7Q5U5X0 104 aa8.01□□□□□ -1.13
USP3-205ENST00000557884 CDIP1Q9H305 208 aa8.01□□□□□ -1.13
USP3-205ENST00000557884 PCP4L1A6NKN8 68 aa8□□□□□ -1.13
USP3-205ENST00000557884 UBE2V1Q13404 147 aa8□□□□□ -1.13
USP3-205ENST00000557884 C1orf195Q5TG92 126 aa8□□□□□ -1.13
USP3-205ENST00000557884 KRTAP13-3Q3SY46 172 aa7.99□□□□□ -1.13
USP3-205ENST00000557884 ANKRD29Q8N6D5 301 aa7.98□□□□□ -1.13
USP3-205ENST00000557884 MUC17Q685J3 4493 aa7.98□□□□□ -1.13
USP3-205ENST00000557884 A0A1W2PPM0 123 aa7.97□□□□□ -1.13
USP3-205ENST00000557884 TEN1Q86WV5 123 aa7.97□□□□□ -1.13
USP3-205ENST00000557884 TRBV20-1A0A075B6N2 111 aa7.96□□□□□ -1.14
USP3-205ENST00000557884 A0A1W2PNM2 257 aa7.96□□□□□ -1.14
USP3-205ENST00000557884 Q6Q795 121 aa7.96□□□□□ -1.14
USP3-205ENST00000557884 RNF213Q63HN8 5207 aa7.96□□□□□ -1.14
USP3-205ENST00000557884 COL5A1-AS1Q5SY13 56 aa7.95□□□□□ -1.14
USP3-205ENST00000557884 A0A087WSZ3 146 aa7.94□□□□□ -1.14
USP3-205ENST00000557884 C9JAW5 83 aa7.94□□□□□ -1.14
USP3-205ENST00000557884 RBM3P98179 157 aaKnown RBP7.93□□□□□ -1.14
USP3-205ENST00000557884 ASB16-AS1Q495Z4 193 aa7.93□□□□□ -1.14
USP3-205ENST00000557884 C9orf92A6NGG3 77 aa7.92□□□□□ -1.14
USP3-205ENST00000557884 SS18L2Q9UHA2 77 aa7.92□□□□□ -1.14
USP3-205ENST00000557884 CCKP06307 115 aa7.91□□□□□ -1.14
USP3-205ENST00000557884 MTURNQ8N3F0 131 aa7.91□□□□□ -1.14
USP3-205ENST00000557884 DSCR8Q96T75 97 aa7.91□□□□□ -1.14
USP3-205ENST00000557884 VPS25Q9BRG1 176 aa7.91□□□□□ -1.14
USP3-205ENST00000557884 TRBV7-4A0A0J9YYF1 115 aa7.9□□□□□ -1.14
USP3-205ENST00000557884 SPCS1Q9Y6A9 102 aa7.89□□□□□ -1.15
USP3-205ENST00000557884 XP32Q5T750 250 aa7.87□□□□□ -1.15
USP3-205ENST00000557884 JMJD7-PLA2G4BH0Y9G9 81 aa7.85□□□□□ -1.15
USP3-205ENST00000557884 H3BT86 120 aa7.84□□□□□ -1.15
USP3-205ENST00000557884 Q96NJ1 140 aa7.84□□□□□ -1.15
USP3-205ENST00000557884 C14orf132Q9NPU4 83 aa7.84□□□□□ -1.15
USP3-205ENST00000557884 MUC2Q02817 5179 aa7.84□□□□□ -1.15
USP3-205ENST00000557884 KRTAP4-8Q9BYQ9 185 aa7.83□□□□□ -1.16
USP3-205ENST00000557884 Q6ZQT0 140 aa7.82□□□□□ -1.16
USP3-205ENST00000557884 LOC110117498A0A087WWA1 95 aa7.81□□□□□ -1.16
USP3-205ENST00000557884 OBSCN-AS1Q96MR7 158 aa7.81□□□□□ -1.16
USP3-205ENST00000557884 SIGMAR1Q99720 223 aa7.81□□□□□ -1.16
USP3-205ENST00000557884 K7EP34 96 aa7.8□□□□□ -1.16
USP3-205ENST00000557884 DEFB116Q30KQ4 102 aa7.8□□□□□ -1.16
USP3-205ENST00000557884 IGKV4-1P06312 121 aa7.78□□□□□ -1.16
USP3-205ENST00000557884 PDE6GP18545 87 aa7.78□□□□□ -1.16
USP3-205ENST00000557884 SEC61BP60468 96 aaKnown RBP7.78□□□□□ -1.16
USP3-205ENST00000557884 LINC00472Q9H8W2 130 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms