RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 RAB37Q96AX2 223 aa7.41□□□□□ -1.22
TMEM260-215ENST00000557626 SNHG12Q9BXW3 62 aa7.41□□□□□ -1.22
TMEM260-215ENST00000557626 H7C2G1 150 aa7.4□□□□□ -1.22
TMEM260-215ENST00000557626 RPL28P46779 137 aaKnown RBP7.4□□□□□ -1.22
TMEM260-215ENST00000557626 KRTAP20-1Q3LI63 56 aa7.4□□□□□ -1.22
TMEM260-215ENST00000557626 FAM19A1Q7Z5A9 133 aa7.4□□□□□ -1.22
TMEM260-215ENST00000557626 Q9BRP9 147 aa7.4□□□□□ -1.22
TMEM260-215ENST00000557626 ERC2-IT1O76042 136 aa7.39□□□□□ -1.23
TMEM260-215ENST00000557626 SMCR5Q8TEV8 140 aa7.39□□□□□ -1.23
TMEM260-215ENST00000557626 Q6ZRX8 168 aa7.38□□□□□ -1.23
TMEM260-215ENST00000557626 ANAPC11Q9NYG5 84 aa7.38□□□□□ -1.23
TMEM260-215ENST00000557626 TRBV7-6A0A0J9YX20 115 aa7.37□□□□□ -1.23
TMEM260-215ENST00000557626 ETDCA0A1B0GVM5 59 aa7.37□□□□□ -1.23
TMEM260-215ENST00000557626 ELOF1P60002 83 aaKnown RBP7.37□□□□□ -1.23
TMEM260-215ENST00000557626 BATFQ16520 125 aa7.37□□□□□ -1.23
TMEM260-215ENST00000557626 TRIAP1O43715 76 aa7.36□□□□□ -1.23
TMEM260-215ENST00000557626 COX7BP24311 80 aa7.36□□□□□ -1.23
TMEM260-215ENST00000557626 UBE2AP49459 152 aa7.36□□□□□ -1.23
TMEM260-215ENST00000557626 NAA38Q9BRA0 125 aaKnown RBP7.35□□□□□ -1.23
TMEM260-215ENST00000557626 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
TMEM260-215ENST00000557626 CBY1Q9Y3M2 126 aa7.35□□□□□ -1.23
TMEM260-215ENST00000557626 TAX1BP3O14907 124 aa7.34□□□□□ -1.23
TMEM260-215ENST00000557626 FAM218AQ96MZ4 157 aa7.34□□□□□ -1.23
TMEM260-215ENST00000557626 LINC00575Q6W349 94 aa7.33□□□□□ -1.24
TMEM260-215ENST00000557626 HIGD2AQ9BW72 106 aa7.33□□□□□ -1.24
TMEM260-215ENST00000557626 Q1RN00 199 aa7.31□□□□□ -1.24
TMEM260-215ENST00000557626 COX6B2Q6YFQ2 88 aa7.31□□□□□ -1.24
TMEM260-215ENST00000557626 ST20-AS1Q8NBB2 130 aa7.31□□□□□ -1.24
TMEM260-215ENST00000557626 CLEC2BQ92478 149 aa7.3□□□□□ -1.24
TMEM260-215ENST00000557626 IGLV8-61A0A075B6I0 122 aa7.29□□□□□ -1.24
TMEM260-215ENST00000557626 SPRR4Q96PI1 79 aa7.29□□□□□ -1.24
TMEM260-215ENST00000557626 DHRS4-AS1Q9P1J3 65 aa7.29□□□□□ -1.24
TMEM260-215ENST00000557626 H0YGX0 51 aa7.28□□□□□ -1.24
TMEM260-215ENST00000557626 VAMP3Q15836 100 aa7.28□□□□□ -1.24
TMEM260-215ENST00000557626 FAM229BQ4G0N7 80 aa7.28□□□□□ -1.24
TMEM260-215ENST00000557626 C9orf118A6NHY6 69 aa7.27□□□□□ -1.25
TMEM260-215ENST00000557626 PSMB2P49721 201 aa7.27□□□□□ -1.25
TMEM260-215ENST00000557626 LINC00846Q9NV44 126 aa7.27□□□□□ -1.25
TMEM260-215ENST00000557626 H3BUT2 72 aa7.26□□□□□ -1.25
TMEM260-215ENST00000557626 COL5A1-AS1Q5SY13 56 aa7.26□□□□□ -1.25
TMEM260-215ENST00000557626 hADV29S1A0JD25 119 aa7.25□□□□□ -1.25
TMEM260-215ENST00000557626 LINC00483Q53H64 154 aa7.25□□□□□ -1.25
TMEM260-215ENST00000557626 IGLV5-48A0A075B6I7 105 aa7.24□□□□□ -1.25
TMEM260-215ENST00000557626 SPRR1BP22528 89 aa7.24□□□□□ -1.25
TMEM260-215ENST00000557626 TCL1BO95988 128 aa7.23□□□□□ -1.25
TMEM260-215ENST00000557626 PCOTHQ58A44 107 aa7.23□□□□□ -1.25
TMEM260-215ENST00000557626 GAGE2AQ6NT46 116 aa7.23□□□□□ -1.25
TMEM260-215ENST00000557626 SPAG11AQ6PDA7 123 aa7.23□□□□□ -1.25
TMEM260-215ENST00000557626 Q6ZQY7 126 aa7.23□□□□□ -1.25
TMEM260-215ENST00000557626 SMIM29Q86T20 159 aa7.23□□□□□ -1.25
TMEM260-215ENST00000557626 Q8N377 158 aa7.23□□□□□ -1.25
TMEM260-215ENST00000557626 A0A1W2PPM0 123 aa7.22□□□□□ -1.25
TMEM260-215ENST00000557626 LST1O00453 97 aa7.22□□□□□ -1.25
TMEM260-215ENST00000557626 A0A1B0GX51 115 aa7.21□□□□□ -1.26
TMEM260-215ENST00000557626 COX6CP09669 75 aa7.21□□□□□ -1.26
TMEM260-215ENST00000557626 SCGB1C2P0DMR2 95 aa7.21□□□□□ -1.26
TMEM260-215ENST00000557626 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.21□□□□□ -1.26
TMEM260-215ENST00000557626 MUC12Q9UKN1 5478 aa7.21□□□□□ -1.26
TMEM260-215ENST00000557626 SLC25A20O43772 301 aa7.2□□□□□ -1.26
TMEM260-215ENST00000557626 DEFB105AQ8NG35 78 aa7.2□□□□□ -1.26
TMEM260-215ENST00000557626 TRACP01848 142 aa7.19□□□□□ -1.26
TMEM260-215ENST00000557626 C3orf22Q8N5N4 141 aa7.19□□□□□ -1.26
TMEM260-215ENST00000557626 ZNF706Q9Y5V0 76 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-215ENST00000557626 TEX49A0A1B0GTD5 131 aa7.17□□□□□ -1.26
TMEM260-215ENST00000557626 KRTAP9-8Q9BYQ0 159 aa7.16□□□□□ -1.26
TMEM260-215ENST00000557626 FABP2P12104 132 aa7.15□□□□□ -1.26
TMEM260-215ENST00000557626 TRBV20-1A0A075B6N2 111 aa7.14□□□□□ -1.27
TMEM260-215ENST00000557626 ATXN8Q156A1 80 aa7.14□□□□□ -1.27
TMEM260-215ENST00000557626 SPCS1Q9Y6A9 102 aa7.13□□□□□ -1.27
TMEM260-215ENST00000557626 IGLV9-49A0A0B4J1Y8 123 aa7.12□□□□□ -1.27
TMEM260-215ENST00000557626 A0A0G2JQZ4 141 aa7.12□□□□□ -1.27
TMEM260-215ENST00000557626 H3BMG7 143 aa7.12□□□□□ -1.27
TMEM260-215ENST00000557626 OCIAD2Q56VL3 154 aa7.12□□□□□ -1.27
TMEM260-215ENST00000557626 LYRM7Q5U5X0 104 aa7.12□□□□□ -1.27
TMEM260-215ENST00000557626 PPDPFLQ8WWR9 84 aa7.12□□□□□ -1.27
TMEM260-215ENST00000557626 K7EP34 96 aa7.11□□□□□ -1.27
TMEM260-215ENST00000557626 BAALC-AS2P0C853 105 aa7.11□□□□□ -1.27
TMEM260-215ENST00000557626 MOBPQ13875 183 aa7.11□□□□□ -1.27
TMEM260-215ENST00000557626 ORMDL1Q9P0S3 153 aa7.11□□□□□ -1.27
TMEM260-215ENST00000557626 SNCGO76070 127 aa7.1□□□□□ -1.27
TMEM260-215ENST00000557626 DNAL4O96015 105 aa7.1□□□□□ -1.27
TMEM260-215ENST00000557626 NDUFV3P56181 108 aaKnown RBP7.1□□□□□ -1.27
TMEM260-215ENST00000557626 KRTAP19-6Q3LI70 58 aa7.1□□□□□ -1.27
TMEM260-215ENST00000557626 MTURNQ8N3F0 131 aa7.1□□□□□ -1.27
TMEM260-215ENST00000557626 LAMTOR3Q9UHA4 124 aa7.1□□□□□ -1.27
TMEM260-215ENST00000557626 PRO0461Q9UI25 63 aa7.1□□□□□ -1.27
TMEM260-215ENST00000557626 C9JAW5 83 aa7.09□□□□□ -1.27
TMEM260-215ENST00000557626 Q8NBF4 154 aa7.08□□□□□ -1.28
TMEM260-215ENST00000557626 UBE2V1Q13404 147 aa7.07□□□□□ -1.28
TMEM260-215ENST00000557626 SSBP3-AS1Q7Z2R9 100 aa7.07□□□□□ -1.28
TMEM260-215ENST00000557626 A0A1B0GV90 55 aa7.06□□□□□ -1.28
TMEM260-215ENST00000557626 TMEM256-PLSCR3K7ERE1 68 aa7.06□□□□□ -1.28
TMEM260-215ENST00000557626 C9orf153Q5TBE3 101 aa7.06□□□□□ -1.28
TMEM260-215ENST00000557626 SPINK1P00995 79 aa7.05□□□□□ -1.28
TMEM260-215ENST00000557626 IGFL1Q6UW32 110 aa7.05□□□□□ -1.28
TMEM260-215ENST00000557626 H3BQ85 93 aa7.04□□□□□ -1.28
TMEM260-215ENST00000557626 A0A1B0GV72 72 aa7.03□□□□□ -1.28
TMEM260-215ENST00000557626 H3BT86 120 aa7.03□□□□□ -1.28
TMEM260-215ENST00000557626 ANKRD29Q8N6D5 301 aa7.03□□□□□ -1.28
TMEM260-215ENST00000557626 OBSCN-AS1Q96MR7 158 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms