RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 KRTAP10-9P60411 292 aa5.73□□□□□ -1.49
SYNE3-205ENST00000557275 PSORS1C2Q9UIG4 136 aa5.73□□□□□ -1.49
SYNE3-205ENST00000557275 FAM229BQ4G0N7 80 aa5.71□□□□□ -1.49
SYNE3-205ENST00000557275 ROMO1P60602 79 aa5.71□□□□□ -1.5
SYNE3-205ENST00000557275 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.71□□□□□ -1.5
SYNE3-205ENST00000557275 Q8N9P0 234 aaPredicted RBP5.7□□□□□ -1.5
SYNE3-205ENST00000557275 S4R3F8 94 aa5.7□□□□□ -1.5
SYNE3-205ENST00000557275 CHD9Q3L8U1 2897 aa5.69□□□□□ -1.5
SYNE3-205ENST00000557275 R4GN34 69 aa5.69□□□□□ -1.5
SYNE3-205ENST00000557275 XIRP2A4UGR9 3374 aa5.68□□□□□ -1.5
SYNE3-205ENST00000557275 VPS13AQ96RL7 3174 aa5.68□□□□□ -1.5
SYNE3-205ENST00000557275 UBR5O95071 2799 aaPredicted RBP5.68□□□□□ -1.5
SYNE3-205ENST00000557275 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
SYNE3-205ENST00000557275 A0A087WTM6 91 aa5.67□□□□□ -1.5
SYNE3-205ENST00000557275 PRR26Q8N8Z3 221 aa5.67□□□□□ -1.5
SYNE3-205ENST00000557275 C19orf73Q9NVV2 129 aa5.66□□□□□ -1.5
SYNE3-205ENST00000557275 A0A1W2PNM2 257 aa5.65□□□□□ -1.5
SYNE3-205ENST00000557275 DSPP15924 2871 aaKnown RBP5.65□□□□□ -1.51
SYNE3-205ENST00000557275 REV3LO60673 3130 aa5.64□□□□□ -1.51
SYNE3-205ENST00000557275 M0R2T5 61 aa5.64□□□□□ -1.51
SYNE3-205ENST00000557275 LINC00612Q8N6U2 182 aa5.63□□□□□ -1.51
SYNE3-205ENST00000557275 Q5VV11 94 aa5.63□□□□□ -1.51
SYNE3-205ENST00000557275 PRUNE2Q8WUY3 3088 aa5.63□□□□□ -1.51
SYNE3-205ENST00000557275 ZCCHC13Q8WW36 166 aaKnown RBP5.63□□□□□ -1.51
SYNE3-205ENST00000557275 H1FX-AS1Q4G0G2 97 aa5.62□□□□□ -1.51
SYNE3-205ENST00000557275 MKI67P46013 3256 aaKnown RBP5.61□□□□□ -1.51
SYNE3-205ENST00000557275 KRTAP24-1Q3LI83 254 aa5.61□□□□□ -1.51
SYNE3-205ENST00000557275 FRYLO94915 3013 aa5.61□□□□□ -1.51
SYNE3-205ENST00000557275 A0A1W2PPR1 153 aa5.6□□□□□ -1.51
SYNE3-205ENST00000557275 Q5XG85 94 aa5.6□□□□□ -1.51
SYNE3-205ENST00000557275 FRYQ5TBA9 3013 aa5.59□□□□□ -1.51
SYNE3-205ENST00000557275 C10orf142B7Z368 130 aa5.59□□□□□ -1.51
SYNE3-205ENST00000557275 NF1P21359 2839 aa5.59□□□□□ -1.51
SYNE3-205ENST00000557275 MGAQ8IWI9 3026 aa5.59□□□□□ -1.51
SYNE3-205ENST00000557275 KALRNO60229 2985 aa5.58□□□□□ -1.52
SYNE3-205ENST00000557275 SEC61BP60468 96 aaKnown RBP5.57□□□□□ -1.52
SYNE3-205ENST00000557275 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
SYNE3-205ENST00000557275 NBEAL2Q6ZNJ1 2754 aa5.55□□□□□ -1.52
SYNE3-205ENST00000557275 FP248Q71RG6 208 aaPredicted RBP5.55□□□□□ -1.52
SYNE3-205ENST00000557275 PRAC1Q96KF2 57 aa5.54□□□□□ -1.52
SYNE3-205ENST00000557275 CHD7Q9P2D1 2997 aa5.54□□□□□ -1.52
SYNE3-205ENST00000557275 GIG44P09565 113 aaPredicted RBP5.54□□□□□ -1.52
SYNE3-205ENST00000557275 WDFY4Q6ZS81 3184 aa5.53□□□□□ -1.52
SYNE3-205ENST00000557275 CELSR3Q9NYQ7 3312 aa5.53□□□□□ -1.52
SYNE3-205ENST00000557275 FREM2Q5SZK8 3169 aa5.53□□□□□ -1.52
SYNE3-205ENST00000557275 A0A087X002 238 aa5.52□□□□□ -1.53
SYNE3-205ENST00000557275 MMP24-AS1A0A0U1RRL7 71 aa5.52□□□□□ -1.53
SYNE3-205ENST00000557275 UNC80Q8N2C7 3258 aa5.52□□□□□ -1.53
SYNE3-205ENST00000557275 A0A1W2PNN7 141 aa5.51□□□□□ -1.53
SYNE3-205ENST00000557275 LAMA3Q16787 3333 aa5.5□□□□□ -1.53
SYNE3-205ENST00000557275 Q5W150 140 aa5.5□□□□□ -1.53
SYNE3-205ENST00000557275 TENM1Q9UKZ4 2725 aa5.5□□□□□ -1.53
SYNE3-205ENST00000557275 ITPR1Q14643 2758 aa5.49□□□□□ -1.53
SYNE3-205ENST00000557275 RANBP2P49792 3224 aaKnown RBP5.48□□□□□ -1.53
SYNE3-205ENST00000557275 ANAPC11Q9NYG5 84 aa5.48□□□□□ -1.53
SYNE3-205ENST00000557275 TENM3Q9P273 2699 aa5.48□□□□□ -1.53
SYNE3-205ENST00000557275 K7EIL1 84 aa5.47□□□□□ -1.53
SYNE3-205ENST00000557275 M0QZ58 72 aa5.47□□□□□ -1.53
SYNE3-205ENST00000557275 CRYBG3Q68DQ2 2970 aa5.47□□□□□ -1.53
SYNE3-205ENST00000557275 LAMA1P25391 3075 aa5.46□□□□□ -1.54
SYNE3-205ENST00000557275 LINC00472Q9H8W2 130 aa5.46□□□□□ -1.54
SYNE3-205ENST00000557275 A0A0G2JQZ4 141 aa5.46□□□□□ -1.54
SYNE3-205ENST00000557275 HIVEP1P15822 2718 aa5.44□□□□□ -1.54
SYNE3-205ENST00000557275 Q6ZR54 194 aa5.44□□□□□ -1.54
SYNE3-205ENST00000557275 SPRR1BP22528 89 aa5.44□□□□□ -1.54
SYNE3-205ENST00000557275 SMR3BP02814 79 aaPredicted RBP5.44□□□□□ -1.54
SYNE3-205ENST00000557275 SPATA8Q6RVD6 105 aa5.43□□□□□ -1.54
SYNE3-205ENST00000557275 DMXL2Q8TDJ6 3036 aa5.43□□□□□ -1.54
SYNE3-205ENST00000557275 PLAC8Q9NZF1 115 aa5.43□□□□□ -1.54
SYNE3-205ENST00000557275 SPRR1AP35321 89 aa5.42□□□□□ -1.54
SYNE3-205ENST00000557275 PANO1I0J062 215 aa5.42□□□□□ -1.54
SYNE3-205ENST00000557275 HTTP42858 3142 aa5.42□□□□□ -1.54
SYNE3-205ENST00000557275 BOD1L1Q8NFC6 3051 aa5.42□□□□□ -1.54
SYNE3-205ENST00000557275 BRCA2P51587 3418 aa5.41□□□□□ -1.54
SYNE3-205ENST00000557275 OXTP01178 125 aa5.41□□□□□ -1.54
SYNE3-205ENST00000557275 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
SYNE3-205ENST00000557275 ASH1LQ9NR48 2969 aaKnown RBP5.41□□□□□ -1.54
SYNE3-205ENST00000557275 KRTAP10-11P60412 298 aa5.4□□□□□ -1.54
SYNE3-205ENST00000557275 CELSR2Q9HCU4 2923 aa5.4□□□□□ -1.54
SYNE3-205ENST00000557275 NIPBLQ6KC79 2804 aaeCLIP5.4□□□□□ -1.54
SYNE3-205ENST00000557275 C20orf166-AS1Q96NR2 134 aa5.37□□□□□ -1.55
SYNE3-205ENST00000557275 DNAH14Q0VDD8 3507 aa5.37□□□□□ -1.55
SYNE3-205ENST00000557275 A0A096LNT2 108 aa5.35□□□□□ -1.55
SYNE3-205ENST00000557275 CASC10Q5T4H9 136 aa5.35□□□□□ -1.55
SYNE3-205ENST00000557275 PP632Q6XCG6 107 aa5.35□□□□□ -1.55
SYNE3-205ENST00000557275 COL12A1Q99715 3063 aa5.35□□□□□ -1.55
SYNE3-205ENST00000557275 Q8NDZ9 215 aa5.35□□□□□ -1.55
SYNE3-205ENST00000557275 TNRC18O15417 2968 aaPredicted RBP5.32□□□□□ -1.56
SYNE3-205ENST00000557275 LRBAP50851 2863 aa5.32□□□□□ -1.56
SYNE3-205ENST00000557275 RPS29P62273 56 aaKnown RBP5.32□□□□□ -1.56
SYNE3-205ENST00000557275 ADM2Q7Z4H4 148 aa5.32□□□□□ -1.56
SYNE3-205ENST00000557275 NBEAQ8NFP9 2946 aa5.32□□□□□ -1.56
SYNE3-205ENST00000557275 ZZEF1O43149 2961 aa5.32□□□□□ -1.56
SYNE3-205ENST00000557275 COL6A3P12111 3177 aa5.31□□□□□ -1.56
SYNE3-205ENST00000557275 USP34Q70CQ2 3546 aa5.31□□□□□ -1.56
SYNE3-205ENST00000557275 VCANP13611 3396 aa5.31□□□□□ -1.56
SYNE3-205ENST00000557275 A6NN06 94 aa5.3□□□□□ -1.56
SYNE3-205ENST00000557275 NDUFAF8A1L188 74 aa5.3□□□□□ -1.56
SYNE3-205ENST00000557275 PDZD2O15018 2839 aa5.29□□□□□ -1.56
SYNE3-205ENST00000557275 CYSTM1Q9H1C7 97 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms