RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 LYNX1P0DP58 116 aa3.41□□□□□ -1.86
TDP1-215ENST00000556498 HTN1P15515 57 aa3.41□□□□□ -1.86
TDP1-215ENST00000556498 Q6ZSA8 131 aa3.41□□□□□ -1.86
TDP1-215ENST00000556498 SPTA1P02549 2419 aa3.41□□□□□ -1.86
TDP1-215ENST00000556498 SPEGQ15772 3267 aa3.41□□□□□ -1.86
TDP1-215ENST00000556498 VPS13AQ96RL7 3174 aa3.41□□□□□ -1.86
TDP1-215ENST00000556498 IGF2RP11717 2491 aa3.41□□□□□ -1.86
TDP1-215ENST00000556498 H3BUX3 64 aa3.4□□□□□ -1.87
TDP1-215ENST00000556498 CACNA1BQ00975 2339 aa3.4□□□□□ -1.87
TDP1-215ENST00000556498 WDFY3Q8IZQ1 3526 aa3.39□□□□□ -1.87
TDP1-215ENST00000556498 H1FX-AS1Q4G0G2 97 aa3.39□□□□□ -1.87
TDP1-215ENST00000556498 KRTAP13-3Q3SY46 172 aa3.38□□□□□ -1.87
TDP1-215ENST00000556498 COL6A6A6NMZ7 2263 aa3.38□□□□□ -1.87
TDP1-215ENST00000556498 ANKRD17O75179 2603 aaKnown RBP3.37□□□□□ -1.87
TDP1-215ENST00000556498 MAPK1IP1LQ8NDC0 245 aa3.37□□□□□ -1.87
TDP1-215ENST00000556498 ACACBO00763 2458 aa3.37□□□□□ -1.87
TDP1-215ENST00000556498 MAP1BP46821 2468 aaKnown RBP3.36□□□□□ -1.87
TDP1-215ENST00000556498 TLN1Q9Y490 2541 aaKnown RBP3.36□□□□□ -1.87
TDP1-215ENST00000556498 CEP295Q9C0D2 2601 aa3.36□□□□□ -1.87
TDP1-215ENST00000556498 TPRP12270 2363 aaKnown RBP3.36□□□□□ -1.87
TDP1-215ENST00000556498 PKD1L2Q7Z442 2459 aa3.36□□□□□ -1.87
TDP1-215ENST00000556498 WDR87Q6ZQQ6 2873 aa3.35□□□□□ -1.87
TDP1-215ENST00000556498 SPRR1BP22528 89 aa3.35□□□□□ -1.87
TDP1-215ENST00000556498 RPL37P61927 97 aaKnown RBP3.35□□□□□ -1.87
TDP1-215ENST00000556498 TYMSOSQ8TAI1 123 aa3.35□□□□□ -1.87
TDP1-215ENST00000556498 DCHS1Q96JQ0 3298 aa3.35□□□□□ -1.87
TDP1-215ENST00000556498 SPTBN4Q9H254 2564 aa3.35□□□□□ -1.87
TDP1-215ENST00000556498 DMXL1Q9Y485 3027 aa3.35□□□□□ -1.87
TDP1-215ENST00000556498 DOPEY2Q9Y3R5 2298 aa3.34□□□□□ -1.87
TDP1-215ENST00000556498 C10orf99Q6UWK7 81 aa3.34□□□□□ -1.87
TDP1-215ENST00000556498 SPACA4Q8TDM5 124 aa3.34□□□□□ -1.87
TDP1-215ENST00000556498 AKAP13Q12802 2813 aa3.34□□□□□ -1.87
TDP1-215ENST00000556498 ANKRD11Q6UB99 2663 aaPredicted RBP3.34□□□□□ -1.88
TDP1-215ENST00000556498 FRYLO94915 3013 aa3.33□□□□□ -1.88
TDP1-215ENST00000556498 CFAP54Q96N23 3096 aa3.33□□□□□ -1.88
TDP1-215ENST00000556498 ATRXP46100 2492 aa3.33□□□□□ -1.88
TDP1-215ENST00000556498 ANKHD1Q8IWZ3 2542 aaKnown RBP3.33□□□□□ -1.88
TDP1-215ENST00000556498 RP1L1Q8IWN7 2480 aaPredicted RBP3.32□□□□□ -1.88
TDP1-215ENST00000556498 FREM2Q5SZK8 3169 aa3.32□□□□□ -1.88
TDP1-215ENST00000556498 DEFB130BP0DP73 79 aa3.32□□□□□ -1.88
TDP1-215ENST00000556498 DEFB130AP0DP74 79 aa3.32□□□□□ -1.88
TDP1-215ENST00000556498 CELSR3Q9NYQ7 3312 aa3.31□□□□□ -1.88
TDP1-215ENST00000556498 Q6ZRN7 208 aaPredicted RBP3.31□□□□□ -1.88
TDP1-215ENST00000556498 CHD8Q9HCK8 2581 aa3.31□□□□□ -1.88
TDP1-215ENST00000556498 DOPEY1Q5JWR5 2465 aa3.31□□□□□ -1.88
TDP1-215ENST00000556498 HIVEP3Q5T1R4 2406 aa3.31□□□□□ -1.88
TDP1-215ENST00000556498 PCNX1Q96RV3 2341 aa3.3□□□□□ -1.88
TDP1-215ENST00000556498 BRD3OSQ6XYD6 125 aa3.3□□□□□ -1.88
TDP1-215ENST00000556498 PIEZO2Q9H5I5 2752 aa3.3□□□□□ -1.88
TDP1-215ENST00000556498 LOC400499M0QZD8 3231 aa3.3□□□□□ -1.88
TDP1-215ENST00000556498 MGAQ8IWI9 3026 aa3.3□□□□□ -1.88
TDP1-215ENST00000556498 BSNQ9UPA5 3926 aa3.29□□□□□ -1.88
TDP1-215ENST00000556498 NBASA2RRP1 2371 aa3.29□□□□□ -1.88
TDP1-215ENST00000556498 USP24Q9UPU5 2620 aa3.29□□□□□ -1.88
TDP1-215ENST00000556498 PKDREJQ9NTG1 2253 aa3.28□□□□□ -1.88
TDP1-215ENST00000556498 ASPMQ8IZT6 3477 aa3.28□□□□□ -1.88
TDP1-215ENST00000556498 UBE2DNLQ8IWF7 75 aa3.28□□□□□ -1.88
TDP1-215ENST00000556498 NOP10Q9NPE3 64 aaKnown RBP3.28□□□□□ -1.88
TDP1-215ENST00000556498 ALMS1Q8TCU4 4167 aa3.28□□□□□ -1.88
TDP1-215ENST00000556498 DMXL2Q8TDJ6 3036 aa3.28□□□□□ -1.88
TDP1-215ENST00000556498 ZFHX4Q86UP3 3567 aa3.28□□□□□ -1.88
TDP1-215ENST00000556498 ROS1P08922 2347 aa3.27□□□□□ -1.89
TDP1-215ENST00000556498 ZNF462Q96JM2 2506 aa3.27□□□□□ -1.89
TDP1-215ENST00000556498 PRO0255Q9UI72 69 aa3.27□□□□□ -1.89
TDP1-215ENST00000556498 ABCA1O95477 2261 aa3.27□□□□□ -1.89
TDP1-215ENST00000556498 FAM208BQ5VWN6 2430 aa3.27□□□□□ -1.89
TDP1-215ENST00000556498 ICE1Q9Y2F5 2266 aa3.26□□□□□ -1.89
TDP1-215ENST00000556498 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
TDP1-215ENST00000556498 SPTBN1Q01082 2364 aaKnown RBP3.26□□□□□ -1.89
TDP1-215ENST00000556498 FRYQ5TBA9 3013 aa3.26□□□□□ -1.89
TDP1-215ENST00000556498 EPG5Q9HCE0 2579 aa3.24□□□□□ -1.89
TDP1-215ENST00000556498 CFAP47Q6ZTR5 3102 aa3.24□□□□□ -1.89
TDP1-215ENST00000556498 LAMA5O15230 3695 aa3.23□□□□□ -1.89
TDP1-215ENST00000556498 SPENQ96T58 3664 aaKnown RBP3.22□□□□□ -1.89
TDP1-215ENST00000556498 K7EIL1 84 aa3.22□□□□□ -1.89
TDP1-215ENST00000556498 KRTAP10-6P60371 365 aaPredicted RBP3.22□□□□□ -1.89
TDP1-215ENST00000556498 PRLHP81277 87 aa3.22□□□□□ -1.89
TDP1-215ENST00000556498 LELP1Q5T871 98 aa3.22□□□□□ -1.89
TDP1-215ENST00000556498 IGSF10Q6WRI0 2623 aa3.22□□□□□ -1.89
TDP1-215ENST00000556498 WNK1Q9H4A3 2382 aa3.21□□□□□ -1.9
TDP1-215ENST00000556498 KRTAP12-2P59991 146 aa3.21□□□□□ -1.9
TDP1-215ENST00000556498 SPTAN1Q13813 2472 aaKnown RBP3.21□□□□□ -1.9
TDP1-215ENST00000556498 ATMQ13315 3056 aa3.21□□□□□ -1.9
TDP1-215ENST00000556498 ZFYVE26Q68DK2 2539 aa3.21□□□□□ -1.9
TDP1-215ENST00000556498 WNK2Q9Y3S1 2297 aa3.21□□□□□ -1.9
TDP1-215ENST00000556498 SMR3AQ99954 134 aa3.2□□□□□ -1.9
TDP1-215ENST00000556498 C10orf95Q9H7T3 257 aa3.2□□□□□ -1.9
TDP1-215ENST00000556498 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.2□□□□□ -1.9
TDP1-215ENST00000556498 NAV2Q8IVL1 2488 aa3.19□□□□□ -1.9
TDP1-215ENST00000556498 USP9XQ93008 2570 aaPredicted RBP3.19□□□□□ -1.9
TDP1-215ENST00000556498 BOD1L1Q8NFC6 3051 aa3.19□□□□□ -1.9
TDP1-215ENST00000556498 AKAP6Q13023 2319 aa3.19□□□□□ -1.9
TDP1-215ENST00000556498 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
TDP1-215ENST00000556498 DSPP15924 2871 aaKnown RBP3.18□□□□□ -1.9
TDP1-215ENST00000556498 ITPR1Q14643 2758 aa3.17□□□□□ -1.9
TDP1-215ENST00000556498 RELNP78509 3460 aa3.17□□□□□ -1.9
TDP1-215ENST00000556498 PTPN13Q12923 2485 aa3.17□□□□□ -1.9
TDP1-215ENST00000556498 ZZEF1O43149 2961 aa3.17□□□□□ -1.9
TDP1-215ENST00000556498 SPG11Q96JI7 2443 aa3.17□□□□□ -1.9
TDP1-215ENST00000556498 UBR5O95071 2799 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms