RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 SPRR1BP22528 89 aa5.58□□□□□ -1.52
SRP54-210ENST00000556380 CEND1Q8N111 149 aa5.58□□□□□ -1.52
SRP54-210ENST00000556380 LINC00304Q8N9R0 145 aa5.58□□□□□ -1.52
SRP54-210ENST00000556380 LPAP08519 4548 aa5.58□□□□□ -1.52
SRP54-210ENST00000556380 TSPAN13O95857 204 aa5.57□□□□□ -1.52
SRP54-210ENST00000556380 CFC1BP0CG36 223 aa5.57□□□□□ -1.52
SRP54-210ENST00000556380 CFC1P0CG37 223 aa5.57□□□□□ -1.52
SRP54-210ENST00000556380 HSD52Q0P140 79 aa5.57□□□□□ -1.52
SRP54-210ENST00000556380 BVES-AS1Q5T3Y7 98 aa5.57□□□□□ -1.52
SRP54-210ENST00000556380 SSBP3-AS1Q7Z2R9 100 aa5.56□□□□□ -1.52
SRP54-210ENST00000556380 RAB37Q96AX2 223 aa5.56□□□□□ -1.52
SRP54-210ENST00000556380 C12orf57Q99622 126 aa5.56□□□□□ -1.52
SRP54-210ENST00000556380 SLC25A20O43772 301 aa5.55□□□□□ -1.52
SRP54-210ENST00000556380 LINC01547P58512 204 aaPredicted RBP5.55□□□□□ -1.52
SRP54-210ENST00000556380 SPAG11AQ6PDA7 123 aa5.55□□□□□ -1.52
SRP54-210ENST00000556380 Q8NBF4 154 aa5.55□□□□□ -1.52
SRP54-210ENST00000556380 IGLV5-48A0A075B6I7 105 aa5.54□□□□□ -1.52
SRP54-210ENST00000556380 IGLV9-49A0A0B4J1Y8 123 aa5.53□□□□□ -1.52
SRP54-210ENST00000556380 SNCGO76070 127 aa5.53□□□□□ -1.52
SRP54-210ENST00000556380 FXYD2P54710 66 aa5.53□□□□□ -1.52
SRP54-210ENST00000556380 MOBPQ13875 183 aa5.53□□□□□ -1.52
SRP54-210ENST00000556380 LINC00575Q6W349 94 aa5.53□□□□□ -1.52
SRP54-210ENST00000556380 SMIM29Q86T20 159 aa5.53□□□□□ -1.52
SRP54-210ENST00000556380 PRO1854Q9UHT4 67 aa5.53□□□□□ -1.52
SRP54-210ENST00000556380 TEX49A0A1B0GTD5 131 aa5.52□□□□□ -1.53
SRP54-210ENST00000556380 H0YGX0 51 aa5.52□□□□□ -1.53
SRP54-210ENST00000556380 RNF213Q63HN8 5207 aa5.51□□□□□ -1.53
SRP54-210ENST00000556380 SPINK1P00995 79 aa5.51□□□□□ -1.53
SRP54-210ENST00000556380 Q8N377 158 aa5.51□□□□□ -1.53
SRP54-210ENST00000556380 DEFB105AQ8NG35 78 aa5.51□□□□□ -1.53
SRP54-210ENST00000556380 LAMTOR3Q9UHA4 124 aa5.51□□□□□ -1.53
SRP54-210ENST00000556380 LOC105371267A0A1B0GV96 52 aa5.5□□□□□ -1.53
SRP54-210ENST00000556380 A0A1B0GX51 115 aa5.5□□□□□ -1.53
SRP54-210ENST00000556380 hADV29S1A0JD25 119 aa5.5□□□□□ -1.53
SRP54-210ENST00000556380 H7C2G1 150 aa5.5□□□□□ -1.53
SRP54-210ENST00000556380 RPS29P62273 56 aaKnown RBP5.5□□□□□ -1.53
SRP54-210ENST00000556380 PRR4Q16378 134 aa5.5□□□□□ -1.53
SRP54-210ENST00000556380 PPDPFLQ8WWR9 84 aa5.5□□□□□ -1.53
SRP54-210ENST00000556380 TSTD3H0UI37 97 aa5.49□□□□□ -1.53
SRP54-210ENST00000556380 Q1RN00 199 aa5.49□□□□□ -1.53
SRP54-210ENST00000556380 OCIAD2Q56VL3 154 aa5.49□□□□□ -1.53
SRP54-210ENST00000556380 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.49□□□□□ -1.53
SRP54-210ENST00000556380 M0R143 59 aa5.48□□□□□ -1.53
SRP54-210ENST00000556380 C9orf153Q5TBE3 101 aa5.48□□□□□ -1.53
SRP54-210ENST00000556380 RETNLBQ9BQ08 111 aa5.48□□□□□ -1.53
SRP54-210ENST00000556380 COX6CP09669 75 aa5.47□□□□□ -1.53
SRP54-210ENST00000556380 Q6ZQY7 126 aa5.47□□□□□ -1.53
SRP54-210ENST00000556380 PRO1933Q9H354 126 aa5.47□□□□□ -1.53
SRP54-210ENST00000556380 FAM218AQ96MZ4 157 aa5.46□□□□□ -1.54
SRP54-210ENST00000556380 H3BQ85 93 aa5.45□□□□□ -1.54
SRP54-210ENST00000556380 K7ERJ3 54 aa5.45□□□□□ -1.54
SRP54-210ENST00000556380 CD164Q04900 197 aa5.45□□□□□ -1.54
SRP54-210ENST00000556380 IGLV7-46A0A075B6I9 117 aa5.44□□□□□ -1.54
SRP54-210ENST00000556380 TRIAP1O43715 76 aa5.44□□□□□ -1.54
SRP54-210ENST00000556380 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
SRP54-210ENST00000556380 IGLV8-61A0A075B6I0 122 aa5.43□□□□□ -1.54
SRP54-210ENST00000556380 A0A0G2JQZ4 141 aa5.43□□□□□ -1.54
SRP54-210ENST00000556380 F8WEM9 126 aa5.43□□□□□ -1.54
SRP54-210ENST00000556380 PSMB2P49721 201 aa5.43□□□□□ -1.54
SRP54-210ENST00000556380 FP248Q71RG6 208 aaPredicted RBP5.43□□□□□ -1.54
SRP54-210ENST00000556380 TPRXLQ17RH7 258 aa5.42□□□□□ -1.54
SRP54-210ENST00000556380 LIMD2Q9BT23 127 aa5.42□□□□□ -1.54
SRP54-210ENST00000556380 Q5XG85 94 aa5.41□□□□□ -1.54
SRP54-210ENST00000556380 Q6JHZ5 121 aa5.41□□□□□ -1.54
SRP54-210ENST00000556380 HRCT1Q6UXD1 115 aa5.41□□□□□ -1.54
SRP54-210ENST00000556380 DNAL4O96015 105 aa5.4□□□□□ -1.54
SRP54-210ENST00000556380 SNHG12Q9BXW3 62 aa5.4□□□□□ -1.54
SRP54-210ENST00000556380 MUC2Q02817 5179 aa5.39□□□□□ -1.55
SRP54-210ENST00000556380 KRTAP13-3Q3SY46 172 aa5.39□□□□□ -1.55
SRP54-210ENST00000556380 CLEC2BQ92478 149 aa5.39□□□□□ -1.55
SRP54-210ENST00000556380 TRACP01848 142 aa5.38□□□□□ -1.55
SRP54-210ENST00000556380 SCGB1C2P0DMR2 95 aa5.38□□□□□ -1.55
SRP54-210ENST00000556380 IGFL1Q6UW32 110 aa5.38□□□□□ -1.55
SRP54-210ENST00000556380 ORMDL1Q9P0S3 153 aa5.38□□□□□ -1.55
SRP54-210ENST00000556380 TMEM256-PLSCR3K7ERE1 68 aa5.37□□□□□ -1.55
SRP54-210ENST00000556380 LST1O00453 97 aa5.37□□□□□ -1.55
SRP54-210ENST00000556380 LYRM7Q5U5X0 104 aa5.37□□□□□ -1.55
SRP54-210ENST00000556380 H3BUT2 72 aa5.36□□□□□ -1.55
SRP54-210ENST00000556380 NDUFV3P56181 108 aaKnown RBP5.36□□□□□ -1.55
SRP54-210ENST00000556380 C1orf195Q5TG92 126 aa5.35□□□□□ -1.55
SRP54-210ENST00000556380 TCL1BO95988 128 aa5.34□□□□□ -1.55
SRP54-210ENST00000556380 C21orf62-AS1Q17RA5 79 aa5.34□□□□□ -1.55
SRP54-210ENST00000556380 Q6Q795 121 aa5.34□□□□□ -1.55
SRP54-210ENST00000556380 TRBV20-1A0A075B6N2 111 aa5.33□□□□□ -1.56
SRP54-210ENST00000556380 TRBV7-7A0A0K0K1E9 115 aa5.33□□□□□ -1.56
SRP54-210ENST00000556380 FABP2P12104 132 aa5.33□□□□□ -1.56
SRP54-210ENST00000556380 UBE2V1Q13404 147 aa5.33□□□□□ -1.56
SRP54-210ENST00000556380 ATXN8Q156A1 80 aa5.33□□□□□ -1.56
SRP54-210ENST00000556380 ASB16-AS1Q495Z4 193 aa5.33□□□□□ -1.56
SRP54-210ENST00000556380 H3BMG7 143 aa5.32□□□□□ -1.56
SRP54-210ENST00000556380 BATFQ16520 125 aa5.31□□□□□ -1.56
SRP54-210ENST00000556380 TEN1Q86WV5 123 aa5.31□□□□□ -1.56
SRP54-210ENST00000556380 SS18L2Q9UHA2 77 aa5.31□□□□□ -1.56
SRP54-210ENST00000556380 NAA38Q9BRA0 125 aaKnown RBP5.3□□□□□ -1.56
SRP54-210ENST00000556380 A0A1W2PNM2 257 aa5.29□□□□□ -1.56
SRP54-210ENST00000556380 ANKRD29Q8N6D5 301 aa5.28□□□□□ -1.56
SRP54-210ENST00000556380 TRBV7-4A0A0J9YYF1 115 aa5.27□□□□□ -1.57
SRP54-210ENST00000556380 TAX1BP3O14907 124 aa5.27□□□□□ -1.57
SRP54-210ENST00000556380 BAALC-AS2P0C853 105 aa5.27□□□□□ -1.57
SRP54-210ENST00000556380 A0A1W2PPM0 123 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms