RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.66□□□□□ -0.54
RCCD1-205ENST00000556333 Q8N377 158 aa11.66□□□□□ -0.54
RCCD1-205ENST00000556333 SMIM29Q86T20 159 aa11.64□□□□□ -0.55
RCCD1-205ENST00000556333 FAM218AQ96MZ4 157 aa11.64□□□□□ -0.55
RCCD1-205ENST00000556333 COX6CP09669 75 aa11.63□□□□□ -0.55
RCCD1-205ENST00000556333 F8WEM9 126 aa11.62□□□□□ -0.55
RCCD1-205ENST00000556333 SPINK1P00995 79 aa11.62□□□□□ -0.55
RCCD1-205ENST00000556333 RETNLBQ9BQ08 111 aa11.62□□□□□ -0.55
RCCD1-205ENST00000556333 HRCT1Q6UXD1 115 aa11.6□□□□□ -0.55
RCCD1-205ENST00000556333 CLEC2BQ92478 149 aa11.6□□□□□ -0.55
RCCD1-205ENST00000556333 A0A1B0GX51 115 aa11.58□□□□□ -0.56
RCCD1-205ENST00000556333 SCGB1C2P0DMR2 95 aa11.57□□□□□ -0.56
RCCD1-205ENST00000556333 OCIAD2Q56VL3 154 aa11.57□□□□□ -0.56
RCCD1-205ENST00000556333 PPDPFLQ8WWR9 84 aa11.57□□□□□ -0.56
RCCD1-205ENST00000556333 SNHG12Q9BXW3 62 aa11.57□□□□□ -0.56
RCCD1-205ENST00000556333 BATFQ16520 125 aa11.56□□□□□ -0.56
RCCD1-205ENST00000556333 DNAL4O96015 105 aa11.55□□□□□ -0.56
RCCD1-205ENST00000556333 RPS29P62273 56 aaKnown RBP11.53□□□□□ -0.56
RCCD1-205ENST00000556333 A0A0G2JQZ4 141 aa11.52□□□□□ -0.57
RCCD1-205ENST00000556333 GHRHP01286 108 aa11.52□□□□□ -0.57
RCCD1-205ENST00000556333 FABP2P12104 132 aa11.5□□□□□ -0.57
RCCD1-205ENST00000556333 LIMD2Q9BT23 127 aa11.49□□□□□ -0.57
RCCD1-205ENST00000556333 CD164Q04900 197 aa11.48□□□□□ -0.57
RCCD1-205ENST00000556333 NAA38Q9BRA0 125 aaKnown RBP11.48□□□□□ -0.57
RCCD1-205ENST00000556333 ORMDL1Q9P0S3 153 aa11.48□□□□□ -0.57
RCCD1-205ENST00000556333 Q6JHZ5 121 aa11.47□□□□□ -0.57
RCCD1-205ENST00000556333 IGLV7-46A0A075B6I9 117 aa11.46□□□□□ -0.57
RCCD1-205ENST00000556333 NDUFV3P56181 108 aaKnown RBP11.46□□□□□ -0.57
RCCD1-205ENST00000556333 IGLV8-61A0A075B6I0 122 aa11.45□□□□□ -0.58
RCCD1-205ENST00000556333 H3BUT2 72 aa11.44□□□□□ -0.58
RCCD1-205ENST00000556333 IGFL1Q6UW32 110 aa11.44□□□□□ -0.58
RCCD1-205ENST00000556333 LST1O00453 97 aa11.43□□□□□ -0.58
RCCD1-205ENST00000556333 FP248Q71RG6 208 aaPredicted RBP11.43□□□□□ -0.58
RCCD1-205ENST00000556333 H3BQ85 93 aa11.42□□□□□ -0.58
RCCD1-205ENST00000556333 TRACP01848 142 aa11.42□□□□□ -0.58
RCCD1-205ENST00000556333 H3BMG7 143 aa11.4□□□□□ -0.58
RCCD1-205ENST00000556333 TMEM256-PLSCR3K7ERE1 68 aa11.4□□□□□ -0.58
RCCD1-205ENST00000556333 ATXN8Q156A1 80 aa11.37□□□□□ -0.59
RCCD1-205ENST00000556333 LYRM7Q5U5X0 104 aa11.37□□□□□ -0.59
RCCD1-205ENST00000556333 A0A1B0GV72 72 aa11.36□□□□□ -0.59
RCCD1-205ENST00000556333 TCL1BO95988 128 aa11.36□□□□□ -0.59
RCCD1-205ENST00000556333 TPRXLQ17RH7 258 aa11.35□□□□□ -0.59
RCCD1-205ENST00000556333 LPAP08519 4548 aa11.34□□□□□ -0.59
RCCD1-205ENST00000556333 TRBV7-7A0A0K0K1E9 115 aa11.33□□□□□ -0.6
RCCD1-205ENST00000556333 CDIP1Q9H305 208 aa11.33□□□□□ -0.6
RCCD1-205ENST00000556333 C9orf118A6NHY6 69 aa11.32□□□□□ -0.6
RCCD1-205ENST00000556333 Q5XG85 94 aa11.32□□□□□ -0.6
RCCD1-205ENST00000556333 TAX1BP3O14907 124 aa11.31□□□□□ -0.6
RCCD1-205ENST00000556333 BAALC-AS2P0C853 105 aa11.31□□□□□ -0.6
RCCD1-205ENST00000556333 UBE2V1Q13404 147 aa11.31□□□□□ -0.6
RCCD1-205ENST00000556333 PCP4L1A6NKN8 68 aa11.29□□□□□ -0.6
RCCD1-205ENST00000556333 TEN1Q86WV5 123 aa11.29□□□□□ -0.6
RCCD1-205ENST00000556333 ANKRD29Q8N6D5 301 aa11.29□□□□□ -0.6
RCCD1-205ENST00000556333 TRBV20-1A0A075B6N2 111 aa11.28□□□□□ -0.6
RCCD1-205ENST00000556333 C1orf195Q5TG92 126 aa11.27□□□□□ -0.61
RCCD1-205ENST00000556333 KRTAP13-3Q3SY46 172 aa11.26□□□□□ -0.61
RCCD1-205ENST00000556333 A0A1W2PPM0 123 aa11.25□□□□□ -0.61
RCCD1-205ENST00000556333 Q6Q795 121 aa11.25□□□□□ -0.61
RCCD1-205ENST00000556333 COL5A1-AS1Q5SY13 56 aa11.23□□□□□ -0.61
RCCD1-205ENST00000556333 C9JAW5 83 aa11.22□□□□□ -0.61
RCCD1-205ENST00000556333 RBM3P98179 157 aaKnown RBP11.22□□□□□ -0.61
RCCD1-205ENST00000556333 SS18L2Q9UHA2 77 aa11.22□□□□□ -0.61
RCCD1-205ENST00000556333 A0A087WSZ3 146 aa11.21□□□□□ -0.61
RCCD1-205ENST00000556333 A0A1W2PNM2 257 aa11.21□□□□□ -0.61
RCCD1-205ENST00000556333 ASB16-AS1Q495Z4 193 aa11.21□□□□□ -0.61
RCCD1-205ENST00000556333 DSCR8Q96T75 97 aa11.21□□□□□ -0.61
RCCD1-205ENST00000556333 KRTAP9-2Q9BYQ4 174 aa11.21□□□□□ -0.61
RCCD1-205ENST00000556333 CCKP06307 115 aa11.19□□□□□ -0.62
RCCD1-205ENST00000556333 VPS25Q9BRG1 176 aa11.18□□□□□ -0.62
RCCD1-205ENST00000556333 C9orf92A6NGG3 77 aa11.17□□□□□ -0.62
RCCD1-205ENST00000556333 TRBV7-4A0A0J9YYF1 115 aa11.16□□□□□ -0.62
RCCD1-205ENST00000556333 SPCS1Q9Y6A9 102 aa11.15□□□□□ -0.62
RCCD1-205ENST00000556333 JMJD7-PLA2G4BH0Y9G9 81 aa11.14□□□□□ -0.63
RCCD1-205ENST00000556333 MTURNQ8N3F0 131 aa11.13□□□□□ -0.63
RCCD1-205ENST00000556333 MUC2Q02817 5179 aa11.11□□□□□ -0.63
RCCD1-205ENST00000556333 H3BT86 120 aa11.09□□□□□ -0.63
RCCD1-205ENST00000556333 XP32Q5T750 250 aa11.09□□□□□ -0.63
RCCD1-205ENST00000556333 C14orf132Q9NPU4 83 aa11.07□□□□□ -0.64
RCCD1-205ENST00000556333 A0A0U1RQV1 116 aa11.04□□□□□ -0.64
RCCD1-205ENST00000556333 KRTAP9-6A0A140TA67 174 aa11.04□□□□□ -0.64
RCCD1-205ENST00000556333 Q6ZQT0 140 aa11.04□□□□□ -0.64
RCCD1-205ENST00000556333 Q96NJ1 140 aa11.04□□□□□ -0.64
RCCD1-205ENST00000556333 LOC110117498A0A087WWA1 95 aa11.03□□□□□ -0.64
RCCD1-205ENST00000556333 PDE6GP18545 87 aa11.03□□□□□ -0.64
RCCD1-205ENST00000556333 SIGMAR1Q99720 223 aa11.03□□□□□ -0.64
RCCD1-205ENST00000556333 SEC61BP60468 96 aaKnown RBP11.02□□□□□ -0.65
RCCD1-205ENST00000556333 K7EP34 96 aa11.01□□□□□ -0.65
RCCD1-205ENST00000556333 OBSCN-AS1Q96MR7 158 aa11.01□□□□□ -0.65
RCCD1-205ENST00000556333 IGKV4-1P06312 121 aa11□□□□□ -0.65
RCCD1-205ENST00000556333 C21orf62-AS1Q17RA5 79 aa11□□□□□ -0.65
RCCD1-205ENST00000556333 DEFB116Q30KQ4 102 aa10.99□□□□□ -0.65
RCCD1-205ENST00000556333 FAT4Q6V0I7 4981 aa10.98□□□□□ -0.65
RCCD1-205ENST00000556333 GTF2H5Q6ZYL4 71 aa10.96□□□□□ -0.65
RCCD1-205ENST00000556333 LINC00472Q9H8W2 130 aa10.95□□□□□ -0.66
RCCD1-205ENST00000556333 A0A1B0GW54 56 aa10.93□□□□□ -0.66
RCCD1-205ENST00000556333 SMCPP49901 116 aaPredicted RBP10.93□□□□□ -0.66
RCCD1-205ENST00000556333 PRO0461Q9UI25 63 aa10.9□□□□□ -0.66
RCCD1-205ENST00000556333 MUC17Q685J3 4493 aa10.9□□□□□ -0.66
RCCD1-205ENST00000556333 DSCR10P59022 87 aa10.89□□□□□ -0.67
RCCD1-205ENST00000556333 RPL37P61927 97 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms