RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 TMEM14BQ9NUH8 114 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 LRP1BQ9NZR2 4599 aa1.77□□□□□ -2.13
SRP54-209ENST00000555746 TFF1P04155 84 aa1.76□□□□□ -2.13
SRP54-209ENST00000555746 ARMS2P0C7Q2 107 aa1.76□□□□□ -2.13
SRP54-209ENST00000555746 PRR9Q5T870 116 aa1.76□□□□□ -2.13
SRP54-209ENST00000555746 Q5VSD8 79 aa1.76□□□□□ -2.13
SRP54-209ENST00000555746 ST20-AS1Q8NBB2 130 aa1.76□□□□□ -2.13
SRP54-209ENST00000555746 C20orf166-AS1Q96NR2 134 aa1.76□□□□□ -2.13
SRP54-209ENST00000555746 CDC42SE2Q9NRR3 84 aa1.76□□□□□ -2.13
SRP54-209ENST00000555746 PSENENQ9NZ42 101 aa1.76□□□□□ -2.13
SRP54-209ENST00000555746 UBE2D4Q9Y2X8 147 aa1.76□□□□□ -2.13
SRP54-209ENST00000555746 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
SRP54-209ENST00000555746 IGHV3-64A0A075B6Q5 118 aa1.75□□□□□ -2.13
SRP54-209ENST00000555746 TRBV6-8A0A0A6YYG3 113 aa1.75□□□□□ -2.13
SRP54-209ENST00000555746 TRBV10-1A0A0K0K1A3 114 aa1.75□□□□□ -2.13
SRP54-209ENST00000555746 LOC101927531A0A1B0GV80 90 aa1.75□□□□□ -2.13
SRP54-209ENST00000555746 LINC01549A6NIU2 74 aa1.75□□□□□ -2.13
SRP54-209ENST00000555746 IGKV1-17P01599 117 aa1.75□□□□□ -2.13
SRP54-209ENST00000555746 SAA2P0DJI9 122 aaPredicted RBP1.75□□□□□ -2.13
SRP54-209ENST00000555746 UBE2D1P51668 147 aa1.75□□□□□ -2.13
SRP54-209ENST00000555746 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.75□□□□□ -2.13
SRP54-209ENST00000555746 KLF14Q8TD94 323 aaPredicted RBP1.75□□□□□ -2.13
SRP54-209ENST00000555746 HIGD1CA8MV81 97 aa1.74□□□□□ -2.13
SRP54-209ENST00000555746 D6R8Y8 96 aa1.74□□□□□ -2.13
SRP54-209ENST00000555746 HMGN4O00479 90 aa1.74□□□□□ -2.13
SRP54-209ENST00000555746 PSCAO43653 123 aa1.74□□□□□ -2.13
SRP54-209ENST00000555746 ELOF1P60002 83 aaKnown RBP1.74□□□□□ -2.13
SRP54-209ENST00000555746 RPL38P63173 70 aaKnown RBP1.74□□□□□ -2.13
SRP54-209ENST00000555746 DEFB112Q30KQ8 113 aa1.74□□□□□ -2.13
SRP54-209ENST00000555746 MUSTN1Q8IVN3 82 aa1.74□□□□□ -2.13
SRP54-209ENST00000555746 DEFB108BQ8NET1 73 aa1.74□□□□□ -2.13
SRP54-209ENST00000555746 Q8TAT8 98 aa1.74□□□□□ -2.13
SRP54-209ENST00000555746 TXNDC17Q9BRA2 123 aa1.74□□□□□ -2.13
SRP54-209ENST00000555746 NDUFA4L2Q9NRX3 87 aa1.74□□□□□ -2.13
SRP54-209ENST00000555746 MINOS1-NBL1R4GNA1 71 aa1.74□□□□□ -2.13
SRP54-209ENST00000555746 NEBP20929 6669 aa1.73□□□□□ -2.13
SRP54-209ENST00000555746 IGHV3OR16-8A0A075B7F1 116 aa1.73□□□□□ -2.13
SRP54-209ENST00000555746 TRBV30A0A0K0K1B3 111 aa1.73□□□□□ -2.13
SRP54-209ENST00000555746 NUPR2A6NF83 97 aa1.73□□□□□ -2.13
SRP54-209ENST00000555746 ODF3BA8MYP8 253 aa1.73□□□□□ -2.13
SRP54-209ENST00000555746 PPYP01298 95 aa1.73□□□□□ -2.13
SRP54-209ENST00000555746 IGHV3-33P01772 117 aa1.73□□□□□ -2.13
SRP54-209ENST00000555746 ERHP84090 104 aaKnown RBP1.73□□□□□ -2.13
SRP54-209ENST00000555746 ZNF833PQ6ZTB9 187 aa1.73□□□□□ -2.13
SRP54-209ENST00000555746 ORMDL1Q9P0S3 153 aa1.73□□□□□ -2.13
SRP54-209ENST00000555746 LENEPQ9Y5L5 61 aa1.73□□□□□ -2.13
SRP54-209ENST00000555746 LRP1Q07954 4544 aaKnown RBP1.72□□□□□ -2.13
SRP54-209ENST00000555746 TRAV12-1A0A0B4J245 112 aa1.72□□□□□ -2.13
SRP54-209ENST00000555746 A0A1B0GU33 70 aa1.72□□□□□ -2.13
SRP54-209ENST00000555746 A0A1W2PNM2 257 aa1.72□□□□□ -2.13
SRP54-209ENST00000555746 FCER1GP30273 86 aa1.72□□□□□ -2.13
SRP54-209ENST00000555746 S100A3P33764 101 aa1.72□□□□□ -2.13
SRP54-209ENST00000555746 FAM74A4Q5TZK3 123 aa1.72□□□□□ -2.13
SRP54-209ENST00000555746 BRD3OSQ6XYD6 125 aa1.72□□□□□ -2.13
SRP54-209ENST00000555746 Q8NAQ8 132 aa1.72□□□□□ -2.13
SRP54-209ENST00000555746 DMAC1Q96GE9 116 aa1.72□□□□□ -2.13
SRP54-209ENST00000555746 AMELXQ99217 191 aa1.72□□□□□ -2.13
SRP54-209ENST00000555746 PRR15LQ9BU68 103 aa1.72□□□□□ -2.13
SRP54-209ENST00000555746 FAT3Q8TDW7 4589 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 TRAV1-2A0A0B4J238 106 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 A0A0J9YX75 114 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 A0A0J9YY99 117 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 TRBV7-4A0A0J9YYF1 115 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 DNAL4O96015 105 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 IGHV3-30P01768 117 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 IFI6P09912 130 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 P0C880 135 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 IGHV3-30-5P0DP03 117 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 PRB3Q04118 309 aaPredicted RBP1.71□□□□□ -2.14
SRP54-209ENST00000555746 SPAG11BQ08648 103 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 C1orf137Q5JT78 98 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 GDF5OSQ5U4N7 250 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 CSAG1Q6PB30 78 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 SPAG11AQ6PDA7 123 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 SPINT4Q6UDR6 99 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 Q86TA4 180 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 LYPD6Q86Y78 171 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 SNURFQ9Y675 71 aa1.71□□□□□ -2.14
SRP54-209ENST00000555746 DNAH5Q8TE73 4624 aa1.7□□□□□ -2.14
SRP54-209ENST00000555746 CPSF4LA6NMK7 179 aaKnown RBP1.7□□□□□ -2.14
SRP54-209ENST00000555746 PPP1R17O96001 155 aa1.7□□□□□ -2.14
SRP54-209ENST00000555746 CAV3P56539 151 aa1.7□□□□□ -2.14
SRP54-209ENST00000555746 KRTAP10-1P60331 282 aa1.7□□□□□ -2.14
SRP54-209ENST00000555746 SNRPGP62308 76 aaKnown RBP1.7□□□□□ -2.14
SRP54-209ENST00000555746 SERF2P84101 59 aa1.7□□□□□ -2.14
SRP54-209ENST00000555746 KRTAP26-1Q6PEX3 210 aa1.7□□□□□ -2.14
SRP54-209ENST00000555746 MRPL36Q9P0J6 103 aaKnown RBP1.7□□□□□ -2.14
SRP54-209ENST00000555746 MACF1Q9UPN3 7388 aaKnown RBP1.7□□□□□ -2.14
SRP54-209ENST00000555746 A0A087WVE0 104 aa1.69□□□□□ -2.14
SRP54-209ENST00000555746 IGKV3D-7A0A0C4DH55 119 aa1.69□□□□□ -2.14
SRP54-209ENST00000555746 TRBV6-5A0A0K0K1A5 114 aa1.69□□□□□ -2.14
SRP54-209ENST00000555746 A0A1B0GUT8 65 aa1.69□□□□□ -2.14
SRP54-209ENST00000555746 NDUFB1O75438 58 aa1.69□□□□□ -2.14
SRP54-209ENST00000555746 DEFB104AQ8WTQ1 72 aa1.69□□□□□ -2.14
SRP54-209ENST00000555746 C4orf3Q8WVX3 66 aa1.69□□□□□ -2.14
SRP54-209ENST00000555746 Q9BRP9 147 aa1.69□□□□□ -2.14
SRP54-209ENST00000555746 LHFPL6Q9Y693 200 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms