RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 LINC01547P58512 204 aaPredicted RBP11.54□□□□□ -0.56
VTI1B-205ENST00000555543 Q1RN00 199 aa11.54□□□□□ -0.56
VTI1B-205ENST00000555543 LAMTOR3Q9UHA4 124 aa11.54□□□□□ -0.56
VTI1B-205ENST00000555543 PRO1854Q9UHT4 67 aa11.54□□□□□ -0.56
VTI1B-205ENST00000555543 TEX49A0A1B0GTD5 131 aa11.52□□□□□ -0.57
VTI1B-205ENST00000555543 IGLV5-48A0A075B6I7 105 aa11.51□□□□□ -0.57
VTI1B-205ENST00000555543 KRTAP13-3Q3SY46 172 aa11.51□□□□□ -0.57
VTI1B-205ENST00000555543 SMIM29Q86T20 159 aa11.51□□□□□ -0.57
VTI1B-205ENST00000555543 C9orf118A6NHY6 69 aa11.5□□□□□ -0.57
VTI1B-205ENST00000555543 SLC25A20O43772 301 aa11.5□□□□□ -0.57
VTI1B-205ENST00000555543 HRCT1Q6UXD1 115 aa11.49□□□□□ -0.57
VTI1B-205ENST00000555543 H3BUT2 72 aa11.45□□□□□ -0.58
VTI1B-205ENST00000555543 H7C2G1 150 aa11.44□□□□□ -0.58
VTI1B-205ENST00000555543 LINC00575Q6W349 94 aa11.44□□□□□ -0.58
VTI1B-205ENST00000555543 NAA38Q9BRA0 125 aaKnown RBP11.44□□□□□ -0.58
VTI1B-205ENST00000555543 VAMP3Q15836 100 aa11.43□□□□□ -0.58
VTI1B-205ENST00000555543 A0A0G2JQZ4 141 aa11.42□□□□□ -0.58
VTI1B-205ENST00000555543 A0A1B0GV90 55 aa11.42□□□□□ -0.58
VTI1B-205ENST00000555543 A0A1W2PPM0 123 aa11.41□□□□□ -0.58
VTI1B-205ENST00000555543 LIMD2Q9BT23 127 aa11.4□□□□□ -0.58
VTI1B-205ENST00000555543 CD164Q04900 197 aa11.39□□□□□ -0.59
VTI1B-205ENST00000555543 Q6ZQY7 126 aa11.39□□□□□ -0.59
VTI1B-205ENST00000555543 hADV29S1A0JD25 119 aa11.38□□□□□ -0.59
VTI1B-205ENST00000555543 FABP2P12104 132 aa11.38□□□□□ -0.59
VTI1B-205ENST00000555543 PSMB2P49721 201 aa11.38□□□□□ -0.59
VTI1B-205ENST00000555543 FAT4Q6V0I7 4981 aa11.37□□□□□ -0.59
VTI1B-205ENST00000555543 TRIAP1O43715 76 aa11.36□□□□□ -0.59
VTI1B-205ENST00000555543 LYRM7Q5U5X0 104 aa11.36□□□□□ -0.59
VTI1B-205ENST00000555543 SCGB1C2P0DMR2 95 aa11.34□□□□□ -0.59
VTI1B-205ENST00000555543 COX6CP09669 75 aa11.33□□□□□ -0.6
VTI1B-205ENST00000555543 SPCS1Q9Y6A9 102 aa11.32□□□□□ -0.6
VTI1B-205ENST00000555543 ASB16-AS1Q495Z4 193 aa11.31□□□□□ -0.6
VTI1B-205ENST00000555543 F8WEM9 126 aa11.3□□□□□ -0.6
VTI1B-205ENST00000555543 K7EP34 96 aa11.3□□□□□ -0.6
VTI1B-205ENST00000555543 XP32Q5T750 250 aa11.3□□□□□ -0.6
VTI1B-205ENST00000555543 Q5XG85 94 aa11.3□□□□□ -0.6
VTI1B-205ENST00000555543 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.3□□□□□ -0.6
VTI1B-205ENST00000555543 A0A0U1RQV1 116 aa11.29□□□□□ -0.6
VTI1B-205ENST00000555543 TRBV20-1A0A075B6N2 111 aa11.28□□□□□ -0.6
VTI1B-205ENST00000555543 GTF2H5Q6ZYL4 71 aa11.28□□□□□ -0.6
VTI1B-205ENST00000555543 IGLV8-61A0A075B6I0 122 aa11.26□□□□□ -0.61
VTI1B-205ENST00000555543 H0YGX0 51 aa11.26□□□□□ -0.61
VTI1B-205ENST00000555543 TCL1BO95988 128 aa11.26□□□□□ -0.61
VTI1B-205ENST00000555543 C1orf195Q5TG92 126 aa11.25□□□□□ -0.61
VTI1B-205ENST00000555543 FAM218AQ96MZ4 157 aa11.25□□□□□ -0.61
VTI1B-205ENST00000555543 UBE2V1Q13404 147 aa11.24□□□□□ -0.61
VTI1B-205ENST00000555543 KRTAP4-1Q9BYQ7 146 aa11.24□□□□□ -0.61
VTI1B-205ENST00000555543 C9orf92A6NGG3 77 aa11.23□□□□□ -0.61
VTI1B-205ENST00000555543 SEC61BP60468 96 aaKnown RBP11.23□□□□□ -0.61
VTI1B-205ENST00000555543 ATXN8Q156A1 80 aa11.23□□□□□ -0.61
VTI1B-205ENST00000555543 IGFL1Q6UW32 110 aa11.23□□□□□ -0.61
VTI1B-205ENST00000555543 PPDPFLQ8WWR9 84 aa11.23□□□□□ -0.61
VTI1B-205ENST00000555543 CLEC2BQ92478 149 aa11.23□□□□□ -0.61
VTI1B-205ENST00000555543 LST1O00453 97 aa11.22□□□□□ -0.61
VTI1B-205ENST00000555543 OCIAD2Q56VL3 154 aa11.22□□□□□ -0.61
VTI1B-205ENST00000555543 Q6JHZ5 121 aa11.22□□□□□ -0.61
VTI1B-205ENST00000555543 H3BMG7 143 aa11.19□□□□□ -0.62
VTI1B-205ENST00000555543 A0A1B0GX51 115 aa11.17□□□□□ -0.62
VTI1B-205ENST00000555543 TRACP01848 142 aa11.17□□□□□ -0.62
VTI1B-205ENST00000555543 TRBV7-7A0A0K0K1E9 115 aa11.16□□□□□ -0.62
VTI1B-205ENST00000555543 LCE2AQ5TA79 106 aaPredicted RBP11.16□□□□□ -0.62
VTI1B-205ENST00000555543 SNCGO76070 127 aa11.13□□□□□ -0.63
VTI1B-205ENST00000555543 PRO0461Q9UI25 63 aa11.13□□□□□ -0.63
VTI1B-205ENST00000555543 C9JAW5 83 aa11.11□□□□□ -0.63
VTI1B-205ENST00000555543 F8W1H4 67 aa11.1□□□□□ -0.63
VTI1B-205ENST00000555543 NDUFV3P56181 108 aaKnown RBP11.1□□□□□ -0.63
VTI1B-205ENST00000555543 DNAL4O96015 105 aa11.09□□□□□ -0.63
VTI1B-205ENST00000555543 PCOTHQ58A44 107 aa11.08□□□□□ -0.64
VTI1B-205ENST00000555543 MTURNQ8N3F0 131 aa11.07□□□□□ -0.64
VTI1B-205ENST00000555543 SMCPP49901 116 aaPredicted RBP11.06□□□□□ -0.64
VTI1B-205ENST00000555543 H3BT86 120 aa11.05□□□□□ -0.64
VTI1B-205ENST00000555543 BAALC-AS2P0C853 105 aa11.04□□□□□ -0.64
VTI1B-205ENST00000555543 Q6Q795 121 aa11.03□□□□□ -0.64
VTI1B-205ENST00000555543 ANKRD29Q8N6D5 301 aa11.03□□□□□ -0.64
VTI1B-205ENST00000555543 ORMDL1Q9P0S3 153 aa11.03□□□□□ -0.64
VTI1B-205ENST00000555543 GHRHP01286 108 aa11□□□□□ -0.65
VTI1B-205ENST00000555543 RPL37P61927 97 aaKnown RBP11□□□□□ -0.65
VTI1B-205ENST00000555543 TEN1Q86WV5 123 aa11□□□□□ -0.65
VTI1B-205ENST00000555543 H3BQ85 93 aa10.99□□□□□ -0.65
VTI1B-205ENST00000555543 A0A087WSZ3 146 aa10.96□□□□□ -0.65
VTI1B-205ENST00000555543 TMEM256-PLSCR3K7ERE1 68 aa10.96□□□□□ -0.65
VTI1B-205ENST00000555543 SS18L2Q9UHA2 77 aa10.96□□□□□ -0.65
VTI1B-205ENST00000555543 A0A1B0GV72 72 aa10.95□□□□□ -0.66
VTI1B-205ENST00000555543 A0A1W2PNM2 257 aa10.95□□□□□ -0.66
VTI1B-205ENST00000555543 ETDBQ3ZM63 59 aa10.94□□□□□ -0.66
VTI1B-205ENST00000555543 KRTAP19-2Q3LHN2 52 aa10.93□□□□□ -0.66
VTI1B-205ENST00000555543 OBSCN-AS1Q96MR7 158 aa10.93□□□□□ -0.66
VTI1B-205ENST00000555543 KRTAP9-2Q9BYQ4 174 aa10.93□□□□□ -0.66
VTI1B-205ENST00000555543 LCE2CQ5TA81 110 aa10.91□□□□□ -0.66
VTI1B-205ENST00000555543 Q96NJ1 140 aa10.91□□□□□ -0.66
VTI1B-205ENST00000555543 TRBV7-4A0A0J9YYF1 115 aa10.84□□□□□ -0.67
VTI1B-205ENST00000555543 JMJD7-PLA2G4BH0Y9G9 81 aa10.84□□□□□ -0.67
VTI1B-205ENST00000555543 Q75L30 129 aa10.83□□□□□ -0.68
VTI1B-205ENST00000555543 CCKP06307 115 aa10.8□□□□□ -0.68
VTI1B-205ENST00000555543 RBM3P98179 157 aaKnown RBP10.79□□□□□ -0.68
VTI1B-205ENST00000555543 SIGMAR1Q99720 223 aa10.79□□□□□ -0.68
VTI1B-205ENST00000555543 MT1HP80294 61 aa10.76□□□□□ -0.69
VTI1B-205ENST00000555543 C14orf132Q9NPU4 83 aa10.76□□□□□ -0.69
VTI1B-205ENST00000555543 J3QR89 54 aa10.75□□□□□ -0.69
VTI1B-205ENST00000555543 DSCR10P59022 87 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms