RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 UQCRHLA0A096LP55 91 aa-1.89□□□□□ -2.71
SNX6-204ENST00000555541 IFI6P09912 130 aa-1.89□□□□□ -2.71
SNX6-204ENST00000555541 COL5A1-AS1Q5SY13 56 aa-1.89□□□□□ -2.71
SNX6-204ENST00000555541 DNAH5Q8TE73 4624 aa-1.89□□□□□ -2.71
SNX6-204ENST00000555541 BPTFQ12830 3046 aa-1.89□□□□□ -2.71
SNX6-204ENST00000555541 SMG1Q96Q15 3661 aaKnown RBP-1.9□□□□□ -2.71
SNX6-204ENST00000555541 PRDM15P57071 1507 aaPredicted RBP-1.9□□□□□ -2.71
SNX6-204ENST00000555541 A0A1B0GV90 55 aa-1.9□□□□□ -2.71
SNX6-204ENST00000555541 DEFB130BP0DP73 79 aa-1.9□□□□□ -2.71
SNX6-204ENST00000555541 DEFB130AP0DP74 79 aa-1.9□□□□□ -2.71
SNX6-204ENST00000555541 IAPPP10997 89 aa-1.9□□□□□ -2.71
SNX6-204ENST00000555541 S100A12P80511 92 aa-1.9□□□□□ -2.71
SNX6-204ENST00000555541 WFDC9Q8NEX5 89 aa-1.9□□□□□ -2.71
SNX6-204ENST00000555541 GNG8Q9UK08 70 aa-1.9□□□□□ -2.71
SNX6-204ENST00000555541 MYO9AB2RTY4 2548 aa-1.91□□□□□ -2.71
SNX6-204ENST00000555541 DLEU1O43261 78 aa-1.91□□□□□ -2.72
SNX6-204ENST00000555541 PKD1L3Q7Z443 1732 aa-1.91□□□□□ -2.72
SNX6-204ENST00000555541 NALCNQ8IZF0 1738 aa-1.91□□□□□ -2.72
SNX6-204ENST00000555541 CRYBG1Q9Y4K1 1723 aa-1.91□□□□□ -2.72
SNX6-204ENST00000555541 CYB5AP00167 134 aa-1.92□□□□□ -2.72
SNX6-204ENST00000555541 HMGN1P05114 100 aa-1.92□□□□□ -2.72
SNX6-204ENST00000555541 MRPS10P82664 201 aaKnown RBP-1.92□□□□□ -2.72
SNX6-204ENST00000555541 PLGLAQ15195 96 aa-1.92□□□□□ -2.72
SNX6-204ENST00000555541 MAGI3Q5TCQ9 1506 aa-1.92□□□□□ -2.72
SNX6-204ENST00000555541 MT-ATP8P03928 68 aa-1.93□□□□□ -2.72
SNX6-204ENST00000555541 MT1EP04732 61 aa-1.93□□□□□ -2.72
SNX6-204ENST00000555541 FAUP35544 74 aaKnown RBP-1.93□□□□□ -2.72
SNX6-204ENST00000555541 LRBAP50851 2863 aa-1.94□□□□□ -2.72
SNX6-204ENST00000555541 TRAV21A0A0B4J279 112 aa-1.94□□□□□ -2.72
SNX6-204ENST00000555541 LYNX1G3V0Z9 82 aa-1.94□□□□□ -2.72
SNX6-204ENST00000555541 CFAP46Q8IYW2 2715 aa-1.94□□□□□ -2.72
SNX6-204ENST00000555541 DEPDC5O75140 1603 aa-1.95□□□□□ -2.72
SNX6-204ENST00000555541 WIZO95785 1651 aa-1.95□□□□□ -2.72
SNX6-204ENST00000555541 MT1BP07438 61 aa-1.95□□□□□ -2.72
SNX6-204ENST00000555541 ABCA3Q99758 1704 aa-1.95□□□□□ -2.72
SNX6-204ENST00000555541 TNP1P09430 55 aa-1.96□□□□□ -2.72
SNX6-204ENST00000555541 DNAH10Q8IVF4 4471 aa-1.97□□□□□ -2.72
SNX6-204ENST00000555541 MMP24-AS1A0A0U1RRL7 71 aa-1.97□□□□□ -2.72
SNX6-204ENST00000555541 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.97□□□□□ -2.72
SNX6-204ENST00000555541 ATP7BP35670 1465 aa-1.97□□□□□ -2.72
SNX6-204ENST00000555541 PLIN4Q96Q06 1357 aa-1.98□□□□□ -2.73
SNX6-204ENST00000555541 EIF4G3O43432 1585 aaKnown RBP-1.98□□□□□ -2.73
SNX6-204ENST00000555541 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.98□□□□□ -2.73
SNX6-204ENST00000555541 SPTAN1Q13813 2472 aaKnown RBP-1.98□□□□□ -2.73
SNX6-204ENST00000555541 ABCC10Q5T3U5 1492 aa-1.98□□□□□ -2.73
SNX6-204ENST00000555541 HMGN2P05204 90 aaKnown RBP-1.98□□□□□ -2.73
SNX6-204ENST00000555541 ACYP1P07311 99 aa-1.98□□□□□ -2.73
SNX6-204ENST00000555541 MT1LQ93083 61 aa-1.98□□□□□ -2.73
SNX6-204ENST00000555541 NWD1Q149M9 1564 aa-1.98□□□□□ -2.73
SNX6-204ENST00000555541 RGPD1P0DJD0 1748 aa-1.99□□□□□ -2.73
SNX6-204ENST00000555541 TIAM2Q8IVF5 1701 aa-1.99□□□□□ -2.73
SNX6-204ENST00000555541 C20orf202A1L168 122 aa-1.99□□□□□ -2.73
SNX6-204ENST00000555541 SARNPP82979 210 aaKnown RBP-1.99□□□□□ -2.73
SNX6-204ENST00000555541 NESP48681 1621 aa-1.99□□□□□ -2.73
SNX6-204ENST00000555541 TEX14Q8IWB6 1497 aa-2□□□□□ -2.73
SNX6-204ENST00000555541 LCE6AA0A183 80 aa-2□□□□□ -2.73
SNX6-204ENST00000555541 SMIM11AP58511 58 aa-2□□□□□ -2.73
SNX6-204ENST00000555541 S100A10P60903 97 aa-2□□□□□ -2.73
SNX6-204ENST00000555541 LINC00032P0C843 101 aa-2.01□□□□□ -2.73
SNX6-204ENST00000555541 MT1GP13640 62 aa-2.01□□□□□ -2.73
SNX6-204ENST00000555541 PEA15Q15121 130 aa-2.01□□□□□ -2.73
SNX6-204ENST00000555541 KRTAP8-1Q8IUC2 63 aa-2.01□□□□□ -2.73
SNX6-204ENST00000555541 RGPD3A6NKT7 1758 aaPredicted RBP-2.01□□□□□ -2.73
SNX6-204ENST00000555541 RGPD4Q7Z3J3 1758 aa-2.01□□□□□ -2.73
SNX6-204ENST00000555541 NDUFB1O75438 58 aa-2.02□□□□□ -2.73
SNX6-204ENST00000555541 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.02□□□□□ -2.73
SNX6-204ENST00000555541 EFCAB10A6NFE3 127 aa-2.03□□□□□ -2.73
SNX6-204ENST00000555541 C2orf88Q9BSF0 95 aa-2.03□□□□□ -2.73
SNX6-204ENST00000555541 EPRSP07814 1512 aaKnown RBP-2.03□□□□□ -2.73
SNX6-204ENST00000555541 CDC42BPAQ5VT25 1732 aa-2.03□□□□□ -2.73
SNX6-204ENST00000555541 SUPT6HQ7KZ85 1726 aaKnown RBP-2.03□□□□□ -2.73
SNX6-204ENST00000555541 CLTCQ00610 1675 aaKnown RBP-2.04□□□□□ -2.74
SNX6-204ENST00000555541 MYO15AQ9UKN7 3530 aa-2.05□□□□□ -2.74
SNX6-204ENST00000555541 FYCO1Q9BQS8 1478 aa-2.05□□□□□ -2.74
SNX6-204ENST00000555541 IGLV5-48A0A075B6I7 105 aa-2.05□□□□□ -2.74
SNX6-204ENST00000555541 IFI27P40305 119 aaPredicted RBP-2.05□□□□□ -2.74
SNX6-204ENST00000555541 MT1MQ8N339 61 aa-2.05□□□□□ -2.74
SNX6-204ENST00000555541 POLR1AO95602 1720 aaPredicted RBP-2.05□□□□□ -2.74
SNX6-204ENST00000555541 ZNF831Q5JPB2 1677 aa-2.06□□□□□ -2.74
SNX6-204ENST00000555541 ZFYVE16Q7Z3T8 1539 aa-2.06□□□□□ -2.74
SNX6-204ENST00000555541 DPY30Q9C005 99 aa-2.06□□□□□ -2.74
SNX6-204ENST00000555541 TLN1Q9Y490 2541 aaKnown RBP-2.06□□□□□ -2.74
SNX6-204ENST00000555541 ADGRG4Q8IZF6 3080 aa-2.06□□□□□ -2.74
SNX6-204ENST00000555541 FANCAO15360 1455 aa-2.07□□□□□ -2.74
SNX6-204ENST00000555541 ATP10BO94823 1461 aa-2.07□□□□□ -2.74
SNX6-204ENST00000555541 DMXL2Q8TDJ6 3036 aa-2.07□□□□□ -2.74
SNX6-204ENST00000555541 UNC13AQ9UPW8 1703 aa-2.07□□□□□ -2.74
SNX6-204ENST00000555541 MT2AP02795 61 aa-2.07□□□□□ -2.74
SNX6-204ENST00000555541 WT1-ASQ06250 92 aa-2.07□□□□□ -2.74
SNX6-204ENST00000555541 NEXMIFQ5QGS0 1516 aa-2.07□□□□□ -2.74
SNX6-204ENST00000555541 ANKRD36CQ5JPF3 1778 aa-2.08□□□□□ -2.74
SNX6-204ENST00000555541 MYH4Q9Y623 1939 aa-2.08□□□□□ -2.74
SNX6-204ENST00000555541 MYMXA0A1B0GTQ4 84 aa-2.08□□□□□ -2.74
SNX6-204ENST00000555541 LINC00587B1AMM8 73 aa-2.08□□□□□ -2.74
SNX6-204ENST00000555541 BOD1L1Q8NFC6 3051 aa-2.08□□□□□ -2.74
SNX6-204ENST00000555541 DOT1LQ8TEK3 1739 aa-2.08□□□□□ -2.74
SNX6-204ENST00000555541 CCNB3Q8WWL7 1395 aa-2.09□□□□□ -2.74
SNX6-204ENST00000555541 NCOA2Q15596 1464 aa-2.09□□□□□ -2.74
SNX6-204ENST00000555541 TOGARAM1Q9Y4F4 1720 aa-2.1□□□□□ -2.75
SNX6-204ENST00000555541 NDUFA4O00483 81 aa-2.1□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms