RNA–Protein interactions for RNA: ENST00000553817.1

KLHL28-203, Transcript of kelch like family member 28, humanhuman

TSL 4

Gene KLHL28, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-203ENST00000553817 AKAP6Q13023 2319 aa1.8□□□□□ -2.12
KLHL28-203ENST00000553817 EP300Q09472 2414 aaPredicted RBP1.8□□□□□ -2.12
KLHL28-203ENST00000553817 MAP1AP78559 2803 aaPredicted RBP1.79□□□□□ -2.12
KLHL28-203ENST00000553817 XIRP2A4UGR9 3374 aa1.79□□□□□ -2.12
KLHL28-203ENST00000553817 PCOTHQ58A44 107 aa1.79□□□□□ -2.12
KLHL28-203ENST00000553817 MRPL34Q9BQ48 92 aaKnown RBP1.79□□□□□ -2.12
KLHL28-203ENST00000553817 LAMA1P25391 3075 aa1.79□□□□□ -2.12
KLHL28-203ENST00000553817 C5orf42Q9H799 3197 aa1.79□□□□□ -2.12
KLHL28-203ENST00000553817 GPR179Q6PRD1 2367 aa1.78□□□□□ -2.12
KLHL28-203ENST00000553817 LY6G6CO95867 125 aa1.78□□□□□ -2.12
KLHL28-203ENST00000553817 BRD3OSQ6XYD6 125 aa1.78□□□□□ -2.12
KLHL28-203ENST00000553817 C8orf17Q9NRJ1 99 aa1.78□□□□□ -2.12
KLHL28-203ENST00000553817 ANKRD17O75179 2603 aaKnown RBP1.77□□□□□ -2.13
KLHL28-203ENST00000553817 C2CD3Q4AC94 2353 aa1.77□□□□□ -2.13
KLHL28-203ENST00000553817 A8MUU9 505 aa1.77□□□□□ -2.13
KLHL28-203ENST00000553817 KRTAP10-1P60331 282 aa1.77□□□□□ -2.13
KLHL28-203ENST00000553817 KRTAP13-2Q52LG2 175 aa1.77□□□□□ -2.13
KLHL28-203ENST00000553817 KRTAP26-1Q6PEX3 210 aa1.77□□□□□ -2.13
KLHL28-203ENST00000553817 C20orf166-AS1Q96NR2 134 aa1.77□□□□□ -2.13
KLHL28-203ENST00000553817 PRO3102Q9H379 93 aa1.77□□□□□ -2.13
KLHL28-203ENST00000553817 DNAH14Q0VDD8 3507 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 SZT2Q5T011 3432 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 ACACAQ13085 2346 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 SPART-AS1P0CW21 52 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 DEFB130BP0DP73 79 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 DEFB130AP0DP74 79 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 LCE1BQ5T7P3 118 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 COX6B2Q6YFQ2 88 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 CCL19Q99731 98 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 MKI67P46013 3256 aaKnown RBP1.76□□□□□ -2.13
KLHL28-203ENST00000553817 ALMS1Q8TCU4 4167 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 PRUNE2Q8WUY3 3088 aa1.76□□□□□ -2.13
KLHL28-203ENST00000553817 PTPRZ1P23471 2315 aaPredicted RBP1.75□□□□□ -2.13
KLHL28-203ENST00000553817 CEP290O15078 2479 aa1.75□□□□□ -2.13
KLHL28-203ENST00000553817 SPTA1P02549 2419 aa1.75□□□□□ -2.13
KLHL28-203ENST00000553817 CIRBP-AS1Q8TBR5 109 aa1.75□□□□□ -2.13
KLHL28-203ENST00000553817 CHD6Q8TD26 2715 aa1.75□□□□□ -2.13
KLHL28-203ENST00000553817 SPTAN1Q13813 2472 aaKnown RBP1.75□□□□□ -2.13
KLHL28-203ENST00000553817 NCOR1O75376 2440 aa1.75□□□□□ -2.13
KLHL28-203ENST00000553817 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.74□□□□□ -2.13
KLHL28-203ENST00000553817 P0C880 135 aa1.74□□□□□ -2.13
KLHL28-203ENST00000553817 LUZP6Q538Z0 58 aa1.74□□□□□ -2.13
KLHL28-203ENST00000553817 LINC01556Q5JQF7 62 aa1.74□□□□□ -2.13
KLHL28-203ENST00000553817 CFAP47Q6ZTR5 3102 aa1.73□□□□□ -2.13
KLHL28-203ENST00000553817 WDFY4Q6ZS81 3184 aa1.73□□□□□ -2.13
KLHL28-203ENST00000553817 DEFB113Q30KQ7 82 aa1.73□□□□□ -2.13
KLHL28-203ENST00000553817 LINC00304Q8N9R0 145 aa1.73□□□□□ -2.13
KLHL28-203ENST00000553817 DMXL2Q8TDJ6 3036 aa1.72□□□□□ -2.13
KLHL28-203ENST00000553817 ITPR1Q14643 2758 aa1.72□□□□□ -2.13
KLHL28-203ENST00000553817 A0A096LPF7 62 aa1.72□□□□□ -2.13
KLHL28-203ENST00000553817 SPINT4Q6UDR6 99 aa1.72□□□□□ -2.13
KLHL28-203ENST00000553817 C10orf99Q6UWK7 81 aa1.72□□□□□ -2.13
KLHL28-203ENST00000553817 USP34Q70CQ2 3546 aa1.72□□□□□ -2.13
KLHL28-203ENST00000553817 TRIOBPQ9H2D6 2365 aa1.72□□□□□ -2.13
KLHL28-203ENST00000553817 LRBAP50851 2863 aa1.71□□□□□ -2.14
KLHL28-203ENST00000553817 NCOR2Q9Y618 2525 aa1.71□□□□□ -2.14
KLHL28-203ENST00000553817 A0A087WTM6 91 aa1.71□□□□□ -2.14
KLHL28-203ENST00000553817 DEFB136Q30KP8 78 aa1.71□□□□□ -2.14
KLHL28-203ENST00000553817 Q96NJ1 140 aa1.71□□□□□ -2.14
KLHL28-203ENST00000553817 SPG11Q96JI7 2443 aa1.71□□□□□ -2.14
KLHL28-203ENST00000553817 ZDBF2Q9HCK1 2354 aa1.71□□□□□ -2.14
KLHL28-203ENST00000553817 FREM2Q5SZK8 3169 aa1.71□□□□□ -2.14
KLHL28-203ENST00000553817 LAMA3Q16787 3333 aa1.7□□□□□ -2.14
KLHL28-203ENST00000553817 REV3LO60673 3130 aa1.7□□□□□ -2.14
KLHL28-203ENST00000553817 BRCA2P51587 3418 aa1.7□□□□□ -2.14
KLHL28-203ENST00000553817 A0A1B0GU33 70 aa1.7□□□□□ -2.14
KLHL28-203ENST00000553817 SPTBN5Q9NRC6 3674 aaKnown RBP1.7□□□□□ -2.14
KLHL28-203ENST00000553817 TLN1Q9Y490 2541 aaKnown RBP1.69□□□□□ -2.14
KLHL28-203ENST00000553817 TENM2Q9NT68 2774 aa1.69□□□□□ -2.14
KLHL28-203ENST00000553817 SSBP3-AS1Q7Z2R9 100 aa1.69□□□□□ -2.14
KLHL28-203ENST00000553817 CRIPTQ9P021 101 aa1.69□□□□□ -2.14
KLHL28-203ENST00000553817 VCANP13611 3396 aa1.69□□□□□ -2.14
KLHL28-203ENST00000553817 SPTBN4Q9H254 2564 aa1.69□□□□□ -2.14
KLHL28-203ENST00000553817 CSPG4Q6UVK1 2322 aa1.68□□□□□ -2.14
KLHL28-203ENST00000553817 APCP25054 2843 aa1.68□□□□□ -2.14
KLHL28-203ENST00000553817 GVINP1Q7Z2Y8 2422 aa1.68□□□□□ -2.14
KLHL28-203ENST00000553817 ABCA2Q9BZC7 2435 aa1.68□□□□□ -2.14
KLHL28-203ENST00000553817 TLN2Q9Y4G6 2542 aa1.68□□□□□ -2.14
KLHL28-203ENST00000553817 H1FX-AS1Q4G0G2 97 aa1.68□□□□□ -2.14
KLHL28-203ENST00000553817 Q6ZSA8 131 aa1.68□□□□□ -2.14
KLHL28-203ENST00000553817 DEFB124Q8NES8 71 aa1.68□□□□□ -2.14
KLHL28-203ENST00000553817 RIF1Q5UIP0 2472 aaKnown RBP1.68□□□□□ -2.14
KLHL28-203ENST00000553817 ADGRG4Q8IZF6 3080 aa1.68□□□□□ -2.14
KLHL28-203ENST00000553817 ASH1LQ9NR48 2969 aaKnown RBP1.68□□□□□ -2.14
KLHL28-203ENST00000553817 NBASA2RRP1 2371 aa1.67□□□□□ -2.14
KLHL28-203ENST00000553817 A0A0G2JQZ4 141 aa1.67□□□□□ -2.14
KLHL28-203ENST00000553817 H0YAA0 97 aa1.67□□□□□ -2.14
KLHL28-203ENST00000553817 CDH23Q9H251 3354 aa1.67□□□□□ -2.14
KLHL28-203ENST00000553817 DCHS2Q6V1P9 2916 aa1.67□□□□□ -2.14
KLHL28-203ENST00000553817 OTOGQ6ZRI0 2925 aa1.67□□□□□ -2.14
KLHL28-203ENST00000553817 UTP20O75691 2785 aaKnown RBP1.67□□□□□ -2.14
KLHL28-203ENST00000553817 HRNRQ86YZ3 2850 aaPredicted RBP1.67□□□□□ -2.14
KLHL28-203ENST00000553817 MYO9AB2RTY4 2548 aa1.67□□□□□ -2.14
KLHL28-203ENST00000553817 DMDP11532 3685 aa1.67□□□□□ -2.14
KLHL28-203ENST00000553817 CELSR2Q9HCU4 2923 aa1.67□□□□□ -2.14
KLHL28-203ENST00000553817 IGF2RP11717 2491 aa1.66□□□□□ -2.14
KLHL28-203ENST00000553817 PRLHP81277 87 aa1.66□□□□□ -2.14
KLHL28-203ENST00000553817 KRTAP13-1Q8IUC0 172 aa1.66□□□□□ -2.14
KLHL28-203ENST00000553817 PSORS1C2Q9UIG4 136 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms