RNA–Protein interactions for RNA: ENST00000553817.1

KLHL28-203, Transcript of kelch like family member 28, humanhuman

TSL 4

Gene KLHL28, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-203ENST00000553817 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
KLHL28-203ENST00000553817 CHIC1Q5VXU3 224 aa16.42■□□□□ 0.22
KLHL28-203ENST00000553817 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
KLHL28-203ENST00000553817 SENP3Q9H4L4 574 aaPredicted RBP14.14□□□□□ -0.15
KLHL28-203ENST00000553817 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
KLHL28-203ENST00000553817 FOXD1Q16676 465 aa13.09□□□□□ -0.31
KLHL28-203ENST00000553817 ADRA2BP18089 450 aa12.69□□□□□ -0.38
KLHL28-203ENST00000553817 PPP6R1Q9UPN7 881 aa12.69□□□□□ -0.38
KLHL28-203ENST00000553817 PIAS4Q8N2W9 510 aaPredicted RBP12.38□□□□□ -0.43
KLHL28-203ENST00000553817 MSH5O43196 834 aa12.03□□□□□ -0.48
KLHL28-203ENST00000553817 PPP4R3CPQ6ZMV5 832 aa11.82□□□□□ -0.52
KLHL28-203ENST00000553817 KCNA4P22459 653 aa11.69□□□□□ -0.54
KLHL28-203ENST00000553817 SCAF1Q9H7N4 1312 aaKnown RBP11.64□□□□□ -0.55
KLHL28-203ENST00000553817 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
KLHL28-203ENST00000553817 MAPK8IP2Q13387 824 aaPredicted RBP11.47□□□□□ -0.57
KLHL28-203ENST00000553817 CNKSR2Q8WXI2 1034 aa11.46□□□□□ -0.57
KLHL28-203ENST00000553817 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
KLHL28-203ENST00000553817 DMRT2Q9Y5R5 561 aa11.3□□□□□ -0.6
KLHL28-203ENST00000553817 RNF216Q9NWF9 866 aaPredicted RBP11.2□□□□□ -0.62
KLHL28-203ENST00000553817 SLC4A1APQ9BWU0 796 aaKnown RBP11.17□□□□□ -0.62
KLHL28-203ENST00000553817 HOXD11P31277 338 aaPredicted RBP11.13□□□□□ -0.63
KLHL28-203ENST00000553817 DNAJC5BQ9UF47 199 aa11.05□□□□□ -0.64
KLHL28-203ENST00000553817 EHMT2Q96KQ7 1210 aa10.98□□□□□ -0.65
KLHL28-203ENST00000553817 CSRNP3Q8WYN3 585 aa10.81□□□□□ -0.68
KLHL28-203ENST00000553817 DCAF8L1A6NGE4 600 aa10.8□□□□□ -0.68
KLHL28-203ENST00000553817 ZBTB22O15209 634 aa10.74□□□□□ -0.69
KLHL28-203ENST00000553817 FOXD4L1Q9NU39 408 aa10.73□□□□□ -0.69
KLHL28-203ENST00000553817 SLC4A2P04920 1241 aa10.7□□□□□ -0.7
KLHL28-203ENST00000553817 POTEDQ86YR6 584 aa10.69□□□□□ -0.7
KLHL28-203ENST00000553817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.6□□□□□ -0.71
KLHL28-203ENST00000553817 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
KLHL28-203ENST00000553817 U3KPZ7 1027 aaPredicted RBP10.43□□□□□ -0.74
KLHL28-203ENST00000553817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.38□□□□□ -0.75
KLHL28-203ENST00000553817 HNRNPUL2Q1KMD3 747 aaKnown RBP10.38□□□□□ -0.75
KLHL28-203ENST00000553817 ATXN8OSP0DMR3 200 aa10.36□□□□□ -0.75
KLHL28-203ENST00000553817 SAMD1Q6SPF0 538 aaPredicted RBP10.34□□□□□ -0.75
KLHL28-203ENST00000553817 RNF39Q9H2S5 420 aa10.31□□□□□ -0.76
KLHL28-203ENST00000553817 APLP2Q06481 763 aa10.25□□□□□ -0.77
KLHL28-203ENST00000553817 C1QBPQ07021 282 aaKnown RBP10.21□□□□□ -0.77
KLHL28-203ENST00000553817 ATF5Q9Y2D1 282 aaPredicted RBP10.2□□□□□ -0.78
KLHL28-203ENST00000553817 SPINK5Q9NQ38 1064 aaPredicted RBP10.1□□□□□ -0.79
KLHL28-203ENST00000553817 CAPN15O75808 1086 aa10.06□□□□□ -0.8
KLHL28-203ENST00000553817 ZNF219Q9P2Y4 722 aaPredicted RBP10.06□□□□□ -0.8
KLHL28-203ENST00000553817 TRHP20396 242 aaPredicted RBP10.05□□□□□ -0.8
KLHL28-203ENST00000553817 CACNB1Q02641 598 aaPredicted RBP9.95□□□□□ -0.82
KLHL28-203ENST00000553817 POLA2Q14181 598 aa9.91□□□□□ -0.82
KLHL28-203ENST00000553817 ABCB7O75027 752 aa9.87□□□□□ -0.83
KLHL28-203ENST00000553817 DSG3P32926 999 aa9.86□□□□□ -0.83
KLHL28-203ENST00000553817 FBLN2P98095 1184 aa9.8□□□□□ -0.84
KLHL28-203ENST00000553817 ZBTB12Q9Y330 459 aaPredicted RBP9.78□□□□□ -0.84
KLHL28-203ENST00000553817 MKRN4PQ13434 485 aaPredicted RBP9.77□□□□□ -0.85
KLHL28-203ENST00000553817 FKBP8Q14318 412 aa9.77□□□□□ -0.85
KLHL28-203ENST00000553817 SPDYE4A6NLX3 237 aa9.63□□□□□ -0.87
KLHL28-203ENST00000553817 OSCARQ8IYS5 282 aa9.56□□□□□ -0.88
KLHL28-203ENST00000553817 SPDYE2BA6NHP3 402 aa9.53□□□□□ -0.88
KLHL28-203ENST00000553817 SPDYE6P0CI01 402 aa9.53□□□□□ -0.88
KLHL28-203ENST00000553817 SPDYE2Q495Y8 402 aa9.53□□□□□ -0.88
KLHL28-203ENST00000553817 ZNF692Q9BU19 519 aaPredicted RBP9.5□□□□□ -0.89
KLHL28-203ENST00000553817 PROM2Q8N271 834 aa9.49□□□□□ -0.89
KLHL28-203ENST00000553817 SSUH2Q9Y2M2 353 aa9.45□□□□□ -0.9
KLHL28-203ENST00000553817 RBM42Q9BTD8 480 aaKnown RBP9.41□□□□□ -0.9
KLHL28-203ENST00000553817 FBXO3Q9UK99 471 aa9.41□□□□□ -0.9
KLHL28-203ENST00000553817 PABPN1Q86U42 306 aaKnown RBP eCLIP9.37□□□□□ -0.91
KLHL28-203ENST00000553817 AKT1S1Q96B36 256 aa9.32□□□□□ -0.92
KLHL28-203ENST00000553817 STAG3Q9UJ98 1225 aa9.27□□□□□ -0.93
KLHL28-203ENST00000553817 VASPP50552 380 aaPredicted RBP9.26□□□□□ -0.93
KLHL28-203ENST00000553817 REM2Q8IYK8 340 aaPredicted RBP9.22□□□□□ -0.93
KLHL28-203ENST00000553817 SPDYE1Q8NFV5 336 aaPredicted RBP9.21□□□□□ -0.94
KLHL28-203ENST00000553817 AMER1Q5JTC6 1135 aaPredicted RBP9.15□□□□□ -0.94
KLHL28-203ENST00000553817 CLEC11AQ9Y240 323 aa9.15□□□□□ -0.94
KLHL28-203ENST00000553817 IFNLR1Q8IU57 520 aaPredicted RBP9.13□□□□□ -0.95
KLHL28-203ENST00000553817 MIER1Q8N108 512 aa9.13□□□□□ -0.95
KLHL28-203ENST00000553817 PLCD3Q8N3E9 789 aa9.13□□□□□ -0.95
KLHL28-203ENST00000553817 RTN4Q9NQC3 1192 aaKnown RBP9.11□□□□□ -0.95
KLHL28-203ENST00000553817 PITPNM1O00562 1244 aa9.1□□□□□ -0.95
KLHL28-203ENST00000553817 PRR29P0C7W0 189 aa9.09□□□□□ -0.95
KLHL28-203ENST00000553817 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
KLHL28-203ENST00000553817 KLHL34Q8N239 644 aa9.08□□□□□ -0.96
KLHL28-203ENST00000553817 ZBTB47Q9UFB7 747 aaPredicted RBP9.03□□□□□ -0.96
KLHL28-203ENST00000553817 SPOCK2Q92563 424 aa9.02□□□□□ -0.97
KLHL28-203ENST00000553817 CREBZFQ9NS37 354 aa9□□□□□ -0.97
KLHL28-203ENST00000553817 CHRDL2Q6WN34 429 aa8.94□□□□□ -0.98
KLHL28-203ENST00000553817 MNX1P50219 401 aaPredicted RBP8.92□□□□□ -0.98
KLHL28-203ENST00000553817 FXR2P51116 673 aaKnown RBP eCLIP8.92□□□□□ -0.98
KLHL28-203ENST00000553817 CHADLQ6NUI6 762 aa8.9□□□□□ -0.98
KLHL28-203ENST00000553817 PRKAR2AP13861 404 aaKnown RBP8.89□□□□□ -0.99
KLHL28-203ENST00000553817 NPM1P06748 294 aaKnown RBP eCLIP8.88□□□□□ -0.99
KLHL28-203ENST00000553817 PKD2Q13563 968 aa8.88□□□□□ -0.99
KLHL28-203ENST00000553817 NUBP1P53384 320 aa8.87□□□□□ -0.99
KLHL28-203ENST00000553817 PIP4P2Q8N4L2 257 aa8.86□□□□□ -0.99
KLHL28-203ENST00000553817 CIZ1Q9ULV3 898 aaPredicted RBP8.85□□□□□ -0.99
KLHL28-203ENST00000553817 FARP1Q9Y4F1 1045 aaPredicted RBP8.85□□□□□ -0.99
KLHL28-203ENST00000553817 GSE1Q14687 1217 aa8.83□□□□□ -1
KLHL28-203ENST00000553817 ECM2O94769 699 aaPredicted RBP8.81□□□□□ -1
KLHL28-203ENST00000553817 DCAF8Q5TAQ9 597 aa8.81□□□□□ -1
KLHL28-203ENST00000553817 FAM212AQ96EL1 285 aa8.8□□□□□ -1
KLHL28-203ENST00000553817 RASEFQ8IZ41 740 aa8.79□□□□□ -1
KLHL28-203ENST00000553817 TRIM41Q8WV44 630 aa8.79□□□□□ -1
KLHL28-203ENST00000553817 TSPYL2Q9H2G4 693 aaPredicted RBP8.72□□□□□ -1.01
KLHL28-203ENST00000553817 RGL2O15211 777 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms