RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 LINC00299Q6ZSB3 139 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 SNX29P2Q8IUI4 249 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 FAM19A2Q8N3H0 131 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 NAA60Q9H7X0 242 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 CACFD1Q9UGQ2 172 aa1.15□□□□□ -2.23
SCFD1-210ENST00000553693 A0A096LNI7 61 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 TMEM262E9PQX1 116 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 JMJD7-PLA2G4BH0Y9G9 81 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 PYYP10082 97 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 RRAS2P62070 204 aaPredicted RBP1.14□□□□□ -2.23
SCFD1-210ENST00000553693 SPATA45Q537H7 98 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 C10orf113Q5VZT2 155 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 Q6AWC8 147 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 CLPSL2Q6UWE3 100 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 LINC00269Q8N2A0 174 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 SMIM3Q9BZL3 60 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 NPVFQ9HCQ7 196 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 SSPOA2VEC9 5147 aa1.14□□□□□ -2.23
SCFD1-210ENST00000553693 SMIM31A0A1B0GVY4 71 aa1.13□□□□□ -2.23
SCFD1-210ENST00000553693 F6UZH7 168 aa1.13□□□□□ -2.23
SCFD1-210ENST00000553693 MT1HP80294 61 aa1.13□□□□□ -2.23
SCFD1-210ENST00000553693 OBSCN-AS1Q96MR7 158 aa1.13□□□□□ -2.23
SCFD1-210ENST00000553693 MGST2Q99735 147 aa1.13□□□□□ -2.23
SCFD1-210ENST00000553693 PSENENQ9NZ42 101 aa1.13□□□□□ -2.23
SCFD1-210ENST00000553693 COMMD3Q9UBI1 195 aa1.13□□□□□ -2.23
SCFD1-210ENST00000553693 NEBP20929 6669 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.12□□□□□ -2.23
SCFD1-210ENST00000553693 TRAV21A0A0B4J279 112 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 RBAKDNA6NC62 111 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 K7ERU9 68 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 NCR3O14931 201 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 SSSCA1O60232 199 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 SLC25A6P12236 298 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 UBE2D3P61077 147 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 UBE2D2P62837 147 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 KRTAP19-2Q3LHN2 52 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 ASB16-AS1Q495Z4 193 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 MIC13Q5XKP0 118 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 FAM167A-AS1Q96KT0 104 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 VPS25Q9BRG1 176 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 LENEPQ9Y5L5 61 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 USH2AO75445 5202 aa1.12□□□□□ -2.23
SCFD1-210ENST00000553693 FAM25AB3EWG3 89 aa1.11□□□□□ -2.23
SCFD1-210ENST00000553693 FAM25CB3EWG5 89 aa1.11□□□□□ -2.23
SCFD1-210ENST00000553693 FAM25GB3EWG6 89 aa1.11□□□□□ -2.23
SCFD1-210ENST00000553693 UBE2D1P51668 147 aa1.11□□□□□ -2.23
SCFD1-210ENST00000553693 LINC00474Q9P2X8 69 aa1.11□□□□□ -2.23
SCFD1-210ENST00000553693 TRBV7-3A0A075B6L6 115 aa1.1□□□□□ -2.23
SCFD1-210ENST00000553693 GVQW2A0A096LPI5 108 aaPredicted RBP1.1□□□□□ -2.23
SCFD1-210ENST00000553693 TRBV10-1A0A0K0K1A3 114 aa1.1□□□□□ -2.23
SCFD1-210ENST00000553693 SFT2D2O95562 160 aa1.1□□□□□ -2.23
SCFD1-210ENST00000553693 ARMS2P0C7Q2 107 aa1.1□□□□□ -2.23
SCFD1-210ENST00000553693 AKAIN1P0CW23 69 aa1.1□□□□□ -2.23
SCFD1-210ENST00000553693 AKR1D1P51857 326 aa1.1□□□□□ -2.23
SCFD1-210ENST00000553693 S100A10P60903 97 aa1.1□□□□□ -2.23
SCFD1-210ENST00000553693 C9orf116Q5BN46 136 aaPredicted RBP1.1□□□□□ -2.23
SCFD1-210ENST00000553693 CLLU1Q5K131 121 aa1.1□□□□□ -2.23
SCFD1-210ENST00000553693 FAM74A4Q5TZK3 123 aa1.1□□□□□ -2.23
SCFD1-210ENST00000553693 NMES1Q9C002 83 aa1.1□□□□□ -2.23
SCFD1-210ENST00000553693 PIGBOS1A0A0B4J2F0 54 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 TRBV6-1A0A0K0K1D8 114 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 UBE2L5PA0A1B0GUS4 154 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 H3BVH4 76 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 FGF7P21781 194 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 PKIAP61925 76 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 UBE2L3P68036 154 aaKnown RBP1.09□□□□□ -2.23
SCFD1-210ENST00000553693 SSBP1Q04837 148 aaKnown RBP1.09□□□□□ -2.23
SCFD1-210ENST00000553693 IQCJQ1A5X6 159 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 OCIAD2Q56VL3 154 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 ATOH7Q8N100 152 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 SMIM4Q8WVI0 70 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 AQP10Q96PS8 301 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 PSMG3Q9BT73 122 aaPredicted RBP1.09□□□□□ -2.23
SCFD1-210ENST00000553693 SCP2D1Q9UJQ7 156 aa1.09□□□□□ -2.23
SCFD1-210ENST00000553693 TRBV25-1A0A075B6N4 114 aa1.08□□□□□ -2.24
SCFD1-210ENST00000553693 M0R2T5 61 aa1.08□□□□□ -2.24
SCFD1-210ENST00000553693 CRIP1P50238 77 aa1.08□□□□□ -2.24
SCFD1-210ENST00000553693 MRPS10P82664 201 aaKnown RBP1.08□□□□□ -2.24
SCFD1-210ENST00000553693 ZNF56Q15929 161 aa1.08□□□□□ -2.24
SCFD1-210ENST00000553693 ZNF727A8MUV8 499 aa1.07□□□□□ -2.24
SCFD1-210ENST00000553693 NCR2O95944 276 aa1.07□□□□□ -2.24
SCFD1-210ENST00000553693 IL7P13232 177 aa1.07□□□□□ -2.24
SCFD1-210ENST00000553693 ADCYAP1P18509 176 aa1.07□□□□□ -2.24
SCFD1-210ENST00000553693 SPCS2Q15005 226 aa1.07□□□□□ -2.24
SCFD1-210ENST00000553693 Q5XG85 94 aa1.07□□□□□ -2.24
SCFD1-210ENST00000553693 TSKUQ8WUA8 353 aa1.07□□□□□ -2.24
SCFD1-210ENST00000553693 TRBV20-1A0A075B6N2 111 aa1.06□□□□□ -2.24
SCFD1-210ENST00000553693 LINC00959A0A1B0GUT2 108 aa1.06□□□□□ -2.24
SCFD1-210ENST00000553693 M0QY20 66 aa1.06□□□□□ -2.24
SCFD1-210ENST00000553693 NDUFB6O95139 128 aa1.06□□□□□ -2.24
SCFD1-210ENST00000553693 C22orf24Q9Y442 160 aa1.06□□□□□ -2.24
SCFD1-210ENST00000553693 ARL2-SNX15V9GYD0 113 aa1.06□□□□□ -2.24
SCFD1-210ENST00000553693 FLGP20930 4061 aaPredicted RBP1.05□□□□□ -2.24
SCFD1-210ENST00000553693 HIGD1CA8MV81 97 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 MGPP08493 103 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 IGLC6P0CF74 106 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 PDE6GP18545 87 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 GCHFRP30047 84 aa1.05□□□□□ -2.24
SCFD1-210ENST00000553693 FAUP35544 74 aaKnown RBP1.05□□□□□ -2.24
SCFD1-210ENST00000553693 KRTAP20-1Q3LI63 56 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms