RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 SPRR1AP35321 89 aa1.39□□□□□ -2.19
TDP1-207ENST00000553617 RPL39P62891 51 aaKnown RBP1.39□□□□□ -2.19
TDP1-207ENST00000553617 DEFB119Q8N690 84 aa1.39□□□□□ -2.19
TDP1-207ENST00000553617 COX14Q96I36 57 aa1.39□□□□□ -2.19
TDP1-207ENST00000553617 IGLV5-48A0A075B6I7 105 aa1.38□□□□□ -2.19
TDP1-207ENST00000553617 KAAG1Q9UBP8 84 aa1.38□□□□□ -2.19
TDP1-207ENST00000553617 STATHP02808 62 aa1.37□□□□□ -2.19
TDP1-207ENST00000553617 WT1-ASQ06250 92 aa1.37□□□□□ -2.19
TDP1-207ENST00000553617 KRTAP21-3Q3LHN1 58 aa1.37□□□□□ -2.19
TDP1-207ENST00000553617 TMEM167AQ8TBQ9 72 aa1.37□□□□□ -2.19
TDP1-207ENST00000553617 RPL39LQ96EH5 51 aaKnown RBP1.37□□□□□ -2.19
TDP1-207ENST00000553617 A0A0C4DFX4 3053 aa1.36□□□□□ -2.19
TDP1-207ENST00000553617 SPTBN2O15020 2390 aa1.36□□□□□ -2.19
TDP1-207ENST00000553617 ZNF292O60281 2723 aa1.36□□□□□ -2.19
TDP1-207ENST00000553617 Q5VSD8 79 aa1.36□□□□□ -2.19
TDP1-207ENST00000553617 DEFB105AQ8NG35 78 aa1.36□□□□□ -2.19
TDP1-207ENST00000553617 SPTBN1Q01082 2364 aaKnown RBP1.36□□□□□ -2.19
TDP1-207ENST00000553617 CELSR2Q9HCU4 2923 aa1.36□□□□□ -2.19
TDP1-207ENST00000553617 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
TDP1-207ENST00000553617 H0YGG7 62 aa1.35□□□□□ -2.19
TDP1-207ENST00000553617 RPL39P5Q59GN2 51 aa1.35□□□□□ -2.19
TDP1-207ENST00000553617 SPRR1BP22528 89 aa1.34□□□□□ -2.19
TDP1-207ENST00000553617 PCNX1Q96RV3 2341 aa1.34□□□□□ -2.2
TDP1-207ENST00000553617 CHD9Q3L8U1 2897 aa1.33□□□□□ -2.2
TDP1-207ENST00000553617 M0QY20 66 aa1.33□□□□□ -2.2
TDP1-207ENST00000553617 DEFB131AP59861 70 aa1.33□□□□□ -2.2
TDP1-207ENST00000553617 KLK9Q2XQG4 91 aa1.33□□□□□ -2.2
TDP1-207ENST00000553617 ABCA12Q86UK0 2595 aa1.32□□□□□ -2.2
TDP1-207ENST00000553617 DEFB108AA8MXU0 73 aa1.32□□□□□ -2.2
TDP1-207ENST00000553617 K7EIM0 57 aa1.32□□□□□ -2.2
TDP1-207ENST00000553617 LEAP2Q969E1 77 aa1.32□□□□□ -2.2
TDP1-207ENST00000553617 GVINP1Q7Z2Y8 2422 aa1.31□□□□□ -2.2
TDP1-207ENST00000553617 MMP24-AS1A0A0U1RRL7 71 aa1.31□□□□□ -2.2
TDP1-207ENST00000553617 H3BUA1 57 aa1.31□□□□□ -2.2
TDP1-207ENST00000553617 CSPG4Q6UVK1 2322 aa1.31□□□□□ -2.2
TDP1-207ENST00000553617 CHD7Q9P2D1 2997 aa1.3□□□□□ -2.2
TDP1-207ENST00000553617 CACNA1HO95180 2353 aa1.29□□□□□ -2.2
TDP1-207ENST00000553617 PRLHP81277 87 aa1.29□□□□□ -2.2
TDP1-207ENST00000553617 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
TDP1-207ENST00000553617 ABCA2Q9BZC7 2435 aa1.29□□□□□ -2.2
TDP1-207ENST00000553617 MEGF8Q7Z7M0 2845 aa1.29□□□□□ -2.2
TDP1-207ENST00000553617 SRRM2Q9UQ35 2752 aaKnown RBP1.28□□□□□ -2.2
TDP1-207ENST00000553617 PRRC2CQ9Y520 2896 aaKnown RBP1.28□□□□□ -2.2
TDP1-207ENST00000553617 A0A0D9SG42 100 aa1.27□□□□□ -2.21
TDP1-207ENST00000553617 S4R3F8 94 aa1.27□□□□□ -2.21
TDP1-207ENST00000553617 F8P00451 2351 aa1.27□□□□□ -2.21
TDP1-207ENST00000553617 DEFB110Q30KQ9 67 aa1.26□□□□□ -2.21
TDP1-207ENST00000553617 DEFB104AQ8WTQ1 72 aa1.26□□□□□ -2.21
TDP1-207ENST00000553617 Q9Y3F1 56 aa1.26□□□□□ -2.21
TDP1-207ENST00000553617 POLQO75417 2590 aa1.26□□□□□ -2.21
TDP1-207ENST00000553617 DEFB109BQ30KR1 87 aa1.25□□□□□ -2.21
TDP1-207ENST00000553617 A8MTW9 85 aa1.24□□□□□ -2.21
TDP1-207ENST00000553617 CD52P31358 61 aa1.24□□□□□ -2.21
TDP1-207ENST00000553617 COL6A3P12111 3177 aa1.24□□□□□ -2.21
TDP1-207ENST00000553617 HELZ2Q9BYK8 2649 aaKnown RBP1.23□□□□□ -2.21
TDP1-207ENST00000553617 OTOGQ6ZRI0 2925 aa1.23□□□□□ -2.21
TDP1-207ENST00000553617 CLPSL2Q6UWE3 100 aa1.23□□□□□ -2.21
TDP1-207ENST00000553617 TOMM7Q9P0U1 55 aa1.23□□□□□ -2.21
TDP1-207ENST00000553617 UBR5O95071 2799 aaPredicted RBP1.23□□□□□ -2.21
TDP1-207ENST00000553617 VWFP04275 2813 aa1.22□□□□□ -2.21
TDP1-207ENST00000553617 AKAP13Q12802 2813 aa1.22□□□□□ -2.21
TDP1-207ENST00000553617 CEP290O15078 2479 aa1.22□□□□□ -2.21
TDP1-207ENST00000553617 APELAP0DMC3 54 aa1.22□□□□□ -2.21
TDP1-207ENST00000553617 KRTAP10-4P60372 401 aaPredicted RBP1.22□□□□□ -2.21
TDP1-207ENST00000553617 ATRQ13535 2644 aa1.22□□□□□ -2.21
TDP1-207ENST00000553617 MGAQ8IWI9 3026 aa1.21□□□□□ -2.22
TDP1-207ENST00000553617 TTC28Q96AY4 2481 aa1.21□□□□□ -2.22
TDP1-207ENST00000553617 HECTD1Q9ULT8 2610 aa1.2□□□□□ -2.22
TDP1-207ENST00000553617 DEFB1P60022 68 aa1.2□□□□□ -2.22
TDP1-207ENST00000553617 NOP10Q9NPE3 64 aaKnown RBP1.2□□□□□ -2.22
TDP1-207ENST00000553617 PCNTO95613 3336 aa1.19□□□□□ -2.22
TDP1-207ENST00000553617 GOLGB1Q14789 3259 aaKnown RBP1.19□□□□□ -2.22
TDP1-207ENST00000553617 SPINK1P00995 79 aa1.19□□□□□ -2.22
TDP1-207ENST00000553617 SRCAPQ6ZRS2 3230 aa1.19□□□□□ -2.22
TDP1-207ENST00000553617 PKD1L2Q7Z442 2459 aa1.19□□□□□ -2.22
TDP1-207ENST00000553617 CEP350Q5VT06 3117 aa1.19□□□□□ -2.22
TDP1-207ENST00000553617 CENPFP49454 3210 aa1.18□□□□□ -2.22
TDP1-207ENST00000553617 CREBBPQ92793 2442 aa1.18□□□□□ -2.22
TDP1-207ENST00000553617 AKAP6Q13023 2319 aa1.17□□□□□ -2.22
TDP1-207ENST00000553617 CELSR1Q9NYQ6 3014 aa1.17□□□□□ -2.22
TDP1-207ENST00000553617 SPTA1P02549 2419 aa1.17□□□□□ -2.22
TDP1-207ENST00000553617 DEFB108BQ8NET1 73 aa1.16□□□□□ -2.22
TDP1-207ENST00000553617 RHPN1-AS1Q9BWJ2 59 aa1.16□□□□□ -2.22
TDP1-207ENST00000553617 CHD6Q8TD26 2715 aa1.16□□□□□ -2.22
TDP1-207ENST00000553617 SZT2Q5T011 3432 aa1.15□□□□□ -2.22
TDP1-207ENST00000553617 CFAP54Q96N23 3096 aa1.15□□□□□ -2.22
TDP1-207ENST00000553617 ACACAQ13085 2346 aa1.14□□□□□ -2.23
TDP1-207ENST00000553617 TNRC18O15417 2968 aaPredicted RBP1.14□□□□□ -2.23
TDP1-207ENST00000553617 CRYBG3Q68DQ2 2970 aa1.14□□□□□ -2.23
TDP1-207ENST00000553617 CSMD3Q7Z407 3707 aa1.13□□□□□ -2.23
TDP1-207ENST00000553617 BDP1A6H8Y1 2624 aa1.13□□□□□ -2.23
TDP1-207ENST00000553617 UTRNP46939 3433 aa1.13□□□□□ -2.23
TDP1-207ENST00000553617 TENM2Q9NT68 2774 aa1.13□□□□□ -2.23
TDP1-207ENST00000553617 EP300Q09472 2414 aaPredicted RBP1.13□□□□□ -2.23
TDP1-207ENST00000553617 TENM4Q6N022 2769 aa1.12□□□□□ -2.23
TDP1-207ENST00000553617 PIEZO1Q92508 2521 aa1.12□□□□□ -2.23
TDP1-207ENST00000553617 HTN1P15515 57 aa1.12□□□□□ -2.23
TDP1-207ENST00000553617 DEFB133Q30KQ1 61 aa1.12□□□□□ -2.23
TDP1-207ENST00000553617 APCP25054 2843 aa1.12□□□□□ -2.23
TDP1-207ENST00000553617 PDZD2O15018 2839 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms