RNA–Protein interactions for RNA: ENST00000553200.1

NR4A1-218, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-218ENST00000553200 HRCT1Q6UXD1 115 aa13.65□□□□□ -0.22
NR4A1-218ENST00000553200 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.65□□□□□ -0.22
NR4A1-218ENST00000553200 A0A0G2JQZ4 141 aa13.64□□□□□ -0.23
NR4A1-218ENST00000553200 TRIAP1O43715 76 aa13.64□□□□□ -0.23
NR4A1-218ENST00000553200 H0YGX0 51 aa13.63□□□□□ -0.23
NR4A1-218ENST00000553200 IGLV7-46A0A075B6I9 117 aa13.61□□□□□ -0.23
NR4A1-218ENST00000553200 CLEC2BQ92478 149 aa13.56□□□□□ -0.24
NR4A1-218ENST00000553200 FP248Q71RG6 208 aaPredicted RBP13.55□□□□□ -0.24
NR4A1-218ENST00000553200 PSMB2P49721 201 aa13.54□□□□□ -0.24
NR4A1-218ENST00000553200 CD164Q04900 197 aa13.54□□□□□ -0.24
NR4A1-218ENST00000553200 F8WEM9 126 aa13.53□□□□□ -0.24
NR4A1-218ENST00000553200 PPDPFLQ8WWR9 84 aa13.53□□□□□ -0.24
NR4A1-218ENST00000553200 TPRXLQ17RH7 258 aa13.52□□□□□ -0.25
NR4A1-218ENST00000553200 IGLV8-61A0A075B6I0 122 aa13.51□□□□□ -0.25
NR4A1-218ENST00000553200 A0A1B0GX51 115 aa13.51□□□□□ -0.25
NR4A1-218ENST00000553200 SNCGO76070 127 aa13.5□□□□□ -0.25
NR4A1-218ENST00000553200 RNF213Q63HN8 5207 aa13.5□□□□□ -0.25
NR4A1-218ENST00000553200 OCIAD2Q56VL3 154 aa13.49□□□□□ -0.25
NR4A1-218ENST00000553200 LIMD2Q9BT23 127 aa13.49□□□□□ -0.25
NR4A1-218ENST00000553200 SNHG12Q9BXW3 62 aa13.49□□□□□ -0.25
NR4A1-218ENST00000553200 IGFL1Q6UW32 110 aa13.47□□□□□ -0.25
NR4A1-218ENST00000553200 TSTD3H0UI37 97 aa13.46□□□□□ -0.25
NR4A1-218ENST00000553200 H3BUT2 72 aa13.46□□□□□ -0.25
NR4A1-218ENST00000553200 M0R143 59 aa13.46□□□□□ -0.25
NR4A1-218ENST00000553200 COX6CP09669 75 aa13.44□□□□□ -0.26
NR4A1-218ENST00000553200 KRTAP13-3Q3SY46 172 aa13.44□□□□□ -0.26
NR4A1-218ENST00000553200 Q6JHZ5 121 aa13.44□□□□□ -0.26
NR4A1-218ENST00000553200 NDUFV3P56181 108 aaKnown RBP13.42□□□□□ -0.26
NR4A1-218ENST00000553200 CDIP1Q9H305 208 aa13.42□□□□□ -0.26
NR4A1-218ENST00000553200 MUC17Q685J3 4493 aa13.42□□□□□ -0.26
NR4A1-218ENST00000553200 Q5XG85 94 aa13.41□□□□□ -0.26
NR4A1-218ENST00000553200 FABP2P12104 132 aa13.39□□□□□ -0.27
NR4A1-218ENST00000553200 DNAL4O96015 105 aa13.38□□□□□ -0.27
NR4A1-218ENST00000553200 SCGB1C2P0DMR2 95 aa13.37□□□□□ -0.27
NR4A1-218ENST00000553200 NAA38Q9BRA0 125 aaKnown RBP13.37□□□□□ -0.27
NR4A1-218ENST00000553200 ORMDL1Q9P0S3 153 aa13.36□□□□□ -0.27
NR4A1-218ENST00000553200 TRBV7-7A0A0K0K1E9 115 aa13.35□□□□□ -0.27
NR4A1-218ENST00000553200 LST1O00453 97 aa13.35□□□□□ -0.27
NR4A1-218ENST00000553200 C1orf195Q5TG92 126 aa13.35□□□□□ -0.27
NR4A1-218ENST00000553200 H3BMG7 143 aa13.33□□□□□ -0.28
NR4A1-218ENST00000553200 GHRHP01286 108 aa13.33□□□□□ -0.28
NR4A1-218ENST00000553200 BATFQ16520 125 aa13.32□□□□□ -0.28
NR4A1-218ENST00000553200 TRACP01848 142 aa13.31□□□□□ -0.28
NR4A1-218ENST00000553200 TCL1BO95988 128 aa13.29□□□□□ -0.28
NR4A1-218ENST00000553200 A0A1B0GV72 72 aa13.28□□□□□ -0.28
NR4A1-218ENST00000553200 TMEM256-PLSCR3K7ERE1 68 aa13.27□□□□□ -0.29
NR4A1-218ENST00000553200 MUC2Q02817 5179 aa13.26□□□□□ -0.29
NR4A1-218ENST00000553200 H3BQ85 93 aa13.25□□□□□ -0.29
NR4A1-218ENST00000553200 Q6Q795 121 aa13.25□□□□□ -0.29
NR4A1-218ENST00000553200 ASB16-AS1Q495Z4 193 aa13.24□□□□□ -0.29
NR4A1-218ENST00000553200 C9orf92A6NGG3 77 aa13.22□□□□□ -0.29
NR4A1-218ENST00000553200 XP32Q5T750 250 aa13.22□□□□□ -0.29
NR4A1-218ENST00000553200 TEN1Q86WV5 123 aa13.22□□□□□ -0.29
NR4A1-218ENST00000553200 A0A1W2PNM2 257 aa13.21□□□□□ -0.29
NR4A1-218ENST00000553200 UBE2V1Q13404 147 aa13.21□□□□□ -0.29
NR4A1-218ENST00000553200 ATXN8Q156A1 80 aa13.19□□□□□ -0.3
NR4A1-218ENST00000553200 BAALC-AS2P0C853 105 aa13.17□□□□□ -0.3
NR4A1-218ENST00000553200 ANKRD29Q8N6D5 301 aa13.17□□□□□ -0.3
NR4A1-218ENST00000553200 A0A087WSZ3 146 aa13.16□□□□□ -0.3
NR4A1-218ENST00000553200 TAX1BP3O14907 124 aa13.16□□□□□ -0.3
NR4A1-218ENST00000553200 C9orf118A6NHY6 69 aa13.12□□□□□ -0.31
NR4A1-218ENST00000553200 SS18L2Q9UHA2 77 aa13.11□□□□□ -0.31
NR4A1-218ENST00000553200 TRBV7-4A0A0J9YYF1 115 aa13.09□□□□□ -0.31
NR4A1-218ENST00000553200 LYRM7Q5U5X0 104 aa13.09□□□□□ -0.31
NR4A1-218ENST00000553200 Q96NJ1 140 aa13.08□□□□□ -0.32
NR4A1-218ENST00000553200 RBM3P98179 157 aaKnown RBP13.07□□□□□ -0.32
NR4A1-218ENST00000553200 TRBV20-1A0A075B6N2 111 aa13.06□□□□□ -0.32
NR4A1-218ENST00000553200 CCKP06307 115 aa13.06□□□□□ -0.32
NR4A1-218ENST00000553200 A0A1W2PPM0 123 aa13.05□□□□□ -0.32
NR4A1-218ENST00000553200 SEC61BP60468 96 aaKnown RBP13.05□□□□□ -0.32
NR4A1-218ENST00000553200 KRTAP4-1Q9BYQ7 146 aa13.04□□□□□ -0.32
NR4A1-218ENST00000553200 C9JAW5 83 aa13.02□□□□□ -0.33
NR4A1-218ENST00000553200 DSCR8Q96T75 97 aa13.02□□□□□ -0.33
NR4A1-218ENST00000553200 VPS25Q9BRG1 176 aa13.01□□□□□ -0.33
NR4A1-218ENST00000553200 MTURNQ8N3F0 131 aa12.96□□□□□ -0.33
NR4A1-218ENST00000553200 PCOTHQ58A44 107 aa12.95□□□□□ -0.34
NR4A1-218ENST00000553200 OBSCN-AS1Q96MR7 158 aa12.95□□□□□ -0.34
NR4A1-218ENST00000553200 JMJD7-PLA2G4BH0Y9G9 81 aa12.93□□□□□ -0.34
NR4A1-218ENST00000553200 COL5A1-AS1Q5SY13 56 aa12.93□□□□□ -0.34
NR4A1-218ENST00000553200 PCP4L1A6NKN8 68 aa12.92□□□□□ -0.34
NR4A1-218ENST00000553200 RPL37P61927 97 aaKnown RBP12.92□□□□□ -0.34
NR4A1-218ENST00000553200 Q6ZQT0 140 aa12.92□□□□□ -0.34
NR4A1-218ENST00000553200 DEFB116Q30KQ4 102 aa12.91□□□□□ -0.34
NR4A1-218ENST00000553200 SIGMAR1Q99720 223 aa12.91□□□□□ -0.34
NR4A1-218ENST00000553200 LINC00472Q9H8W2 130 aa12.91□□□□□ -0.34
NR4A1-218ENST00000553200 C14orf132Q9NPU4 83 aa12.9□□□□□ -0.34
NR4A1-218ENST00000553200 FAT4Q6V0I7 4981 aa12.89□□□□□ -0.35
NR4A1-218ENST00000553200 LOC110117498A0A087WWA1 95 aa12.89□□□□□ -0.35
NR4A1-218ENST00000553200 IGKV4-1P06312 121 aa12.89□□□□□ -0.35
NR4A1-218ENST00000553200 SPCS1Q9Y6A9 102 aa12.89□□□□□ -0.35
NR4A1-218ENST00000553200 H3BT86 120 aa12.87□□□□□ -0.35
NR4A1-218ENST00000553200 A0A0U1RQV1 116 aa12.84□□□□□ -0.35
NR4A1-218ENST00000553200 DSCR10P59022 87 aa12.83□□□□□ -0.36
NR4A1-218ENST00000553200 PDE6GP18545 87 aa12.81□□□□□ -0.36
NR4A1-218ENST00000553200 Q75L30 129 aa12.8□□□□□ -0.36
NR4A1-218ENST00000553200 SMCPP49901 116 aaPredicted RBP12.78□□□□□ -0.36
NR4A1-218ENST00000553200 NOTCH2NLQ7Z3S9 236 aa12.77□□□□□ -0.37
NR4A1-218ENST00000553200 K7EP34 96 aa12.75□□□□□ -0.37
NR4A1-218ENST00000553200 C21orf62-AS1Q17RA5 79 aa12.75□□□□□ -0.37
NR4A1-218ENST00000553200 C20orf166-AS1Q96NR2 134 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms