RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, human

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-223	ENST00000552352	PSPHP1	O15172	72 aa		5.11	□□□□□ -1.59
RPH3A-223	ENST00000552352	PMAIP1	Q13794	54 aa		5.1	□□□□□ -1.59
RPH3A-223	ENST00000552352	PRR4	Q16378	134 aa		5.1	□□□□□ -1.59
RPH3A-223	ENST00000552352	LINC00476	Q8WZB0	136 aa		5.1	□□□□□ -1.59
RPH3A-223	ENST00000552352	MP68	P56378	58 aa		5.09	□□□□□ -1.59
RPH3A-223	ENST00000552352	UBE2B	P63146	152 aa		5.09	□□□□□ -1.59
RPH3A-223	ENST00000552352	MRPL55	Q7Z7F7	128 aa	Known RBP	5.09	□□□□□ -1.59
RPH3A-223	ENST00000552352	KRTAP7-1	Q8IUC3	87 aa		5.09	□□□□□ -1.59
RPH3A-223	ENST00000552352		A0A0A0MQY5	61 aa		5.08	□□□□□ -1.6
RPH3A-223	ENST00000552352	IGFL1	Q6UW32	110 aa		5.07	□□□□□ -1.6
RPH3A-223	ENST00000552352	B9D2	Q9BPU9	175 aa		5.07	□□□□□ -1.6
RPH3A-223	ENST00000552352	WFDC13	Q8IUB5	93 aa		5.07	□□□□□ -1.6
RPH3A-223	ENST00000552352	SPANXA2-OT1	Q8N9U9	137 aa		5.07	□□□□□ -1.6
RPH3A-223	ENST00000552352	LINC00588	Q9Y4M8	146 aa		5.07	□□□□□ -1.6
RPH3A-223	ENST00000552352	FBN1	P35555	2871 aa	Known RBP	5.07	□□□□□ -1.6
RPH3A-223	ENST00000552352		A8MUN3	132 aa		5.06	□□□□□ -1.6
RPH3A-223	ENST00000552352	REG3G	Q6UW15	175 aa		5.06	□□□□□ -1.6
RPH3A-223	ENST00000552352		H3BPC8	53 aa		5.06	□□□□□ -1.6
RPH3A-223	ENST00000552352	IGLV8-61	A0A075B6I0	122 aa		5.05	□□□□□ -1.6
RPH3A-223	ENST00000552352	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.05	□□□□□ -1.6
RPH3A-223	ENST00000552352	DEFB116	Q30KQ4	102 aa		5.05	□□□□□ -1.6
RPH3A-223	ENST00000552352	LINC00208	Q96KT6	92 aa		5.05	□□□□□ -1.6
RPH3A-223	ENST00000552352	ANK2	Q01484	3957 aa		5.05	□□□□□ -1.6
RPH3A-223	ENST00000552352		Q5VV11	94 aa		5.05	□□□□□ -1.6
RPH3A-223	ENST00000552352		A0A087WSZ3	146 aa		5.04	□□□□□ -1.6
RPH3A-223	ENST00000552352		A0A0G2JQZ4	141 aa		5.04	□□□□□ -1.6
RPH3A-223	ENST00000552352		A0A1W2PNN7	141 aa		5.04	□□□□□ -1.6
RPH3A-223	ENST00000552352		H0Y9P7	68 aa		5.03	□□□□□ -1.6
RPH3A-223	ENST00000552352	PRB2	P02812	416 aa	Predicted RBP	5.03	□□□□□ -1.6
RPH3A-223	ENST00000552352	LIMD2	Q9BT23	127 aa		5.03	□□□□□ -1.6
RPH3A-223	ENST00000552352	CASC10	Q5T4H9	136 aa		5.03	□□□□□ -1.6
RPH3A-223	ENST00000552352	UBE2A	P49459	152 aa		5.02	□□□□□ -1.61
RPH3A-223	ENST00000552352	CASC2	Q6XLA1	102 aa		5.02	□□□□□ -1.61
RPH3A-223	ENST00000552352		Q8N9P0	234 aa	Predicted RBP	5.02	□□□□□ -1.61
RPH3A-223	ENST00000552352	STAB1	Q9NY15	2570 aa		5.02	□□□□□ -1.61
RPH3A-223	ENST00000552352	RPL37A	P61513	92 aa	Known RBP	5.02	□□□□□ -1.61
RPH3A-223	ENST00000552352	PKD1L1	Q8TDX9	2849 aa		5.02	□□□□□ -1.61
RPH3A-223	ENST00000552352	CNBP	P62633	177 aa	Known RBP	5.01	□□□□□ -1.61
RPH3A-223	ENST00000552352	C9orf163	Q8N9P6	203 aa		5.01	□□□□□ -1.61
RPH3A-223	ENST00000552352		A8MU10	97 aa		5	□□□□□ -1.61
RPH3A-223	ENST00000552352		A8MWP4	228 aa		5	□□□□□ -1.61
RPH3A-223	ENST00000552352	CHKB-CPT1B	H3BT56	60 aa		5	□□□□□ -1.61
RPH3A-223	ENST00000552352	PRLH	P81277	87 aa		5	□□□□□ -1.61
RPH3A-223	ENST00000552352	DNAH1	Q9P2D7	4330 aa		5	□□□□□ -1.61
RPH3A-223	ENST00000552352	TENM3	Q9P273	2699 aa		4.99	□□□□□ -1.61
RPH3A-223	ENST00000552352	APLN	Q9ULZ1	77 aa		4.99	□□□□□ -1.61
RPH3A-223	ENST00000552352	PRR15L	Q9BU68	103 aa		4.99	□□□□□ -1.61
RPH3A-223	ENST00000552352	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.98	□□□□□ -1.61
RPH3A-223	ENST00000552352	CD164	Q04900	197 aa		4.98	□□□□□ -1.61
RPH3A-223	ENST00000552352		Q75L30	129 aa		4.98	□□□□□ -1.61
RPH3A-223	ENST00000552352	C16orf90	A8MZG2	172 aa		4.97	□□□□□ -1.61
RPH3A-223	ENST00000552352	LINC00472	Q9H8W2	130 aa		4.97	□□□□□ -1.61
RPH3A-223	ENST00000552352	LOC101927531	A0A1B0GV80	90 aa		4.96	□□□□□ -1.61
RPH3A-223	ENST00000552352	NUPR2	A6NF83	97 aa		4.96	□□□□□ -1.61
RPH3A-223	ENST00000552352	IGLV7-46	A0A075B6I9	117 aa		4.96	□□□□□ -1.62
RPH3A-223	ENST00000552352		A0A096LNI7	61 aa		4.96	□□□□□ -1.62
RPH3A-223	ENST00000552352	SPRR1B	P22528	89 aa		4.96	□□□□□ -1.62
RPH3A-223	ENST00000552352	COA5	Q86WW8	74 aa		4.96	□□□□□ -1.62
RPH3A-223	ENST00000552352	COL6A5	A8TX70	2615 aa		4.95	□□□□□ -1.62
RPH3A-223	ENST00000552352	C14orf177	Q52M58	125 aa		4.95	□□□□□ -1.62
RPH3A-223	ENST00000552352	MMP24-AS1	A0A0U1RRL7	71 aa		4.95	□□□□□ -1.62
RPH3A-223	ENST00000552352	KTN1-AS1	Q86SY8	53 aa		4.95	□□□□□ -1.62
RPH3A-223	ENST00000552352	ATP11AUN	Q6ZP68	121 aa		4.94	□□□□□ -1.62
RPH3A-223	ENST00000552352	IGKV2-24	A0A0C4DH68	120 aa		4.94	□□□□□ -1.62
RPH3A-223	ENST00000552352		H0Y9J4	135 aa		4.94	□□□□□ -1.62
RPH3A-223	ENST00000552352	LCA10	Q71F78	164 aa		4.94	□□□□□ -1.62
RPH3A-223	ENST00000552352	KRTAP1-5	Q9BYS1	174 aa		4.94	□□□□□ -1.62
RPH3A-223	ENST00000552352		A6NED7	52 aa		4.93	□□□□□ -1.62
RPH3A-223	ENST00000552352	UBE2DNL	Q8IWF7	75 aa		4.92	□□□□□ -1.62
RPH3A-223	ENST00000552352	SPTSSB	Q8NFR3	76 aa		4.92	□□□□□ -1.62
RPH3A-223	ENST00000552352	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.92	□□□□□ -1.62
RPH3A-223	ENST00000552352	NOTCH1	P46531	2555 aa		4.92	□□□□□ -1.62
RPH3A-223	ENST00000552352	PRR26	Q8N8Z3	221 aa		4.91	□□□□□ -1.62
RPH3A-223	ENST00000552352	TP53AIP1	Q9HCN2	124 aa		4.91	□□□□□ -1.62
RPH3A-223	ENST00000552352	CDC42SE1	Q9NRR8	79 aa		4.91	□□□□□ -1.62
RPH3A-223	ENST00000552352	KRTAP21-3	Q3LHN1	58 aa		4.91	□□□□□ -1.62
RPH3A-223	ENST00000552352	ASB16-AS1	Q495Z4	193 aa		4.9	□□□□□ -1.62
RPH3A-223	ENST00000552352	KRTAP11-1	Q8IUC1	163 aa		4.9	□□□□□ -1.62
RPH3A-223	ENST00000552352	LINC01558	Q9Y6Z2	57 aa		4.9	□□□□□ -1.62
RPH3A-223	ENST00000552352	NBEAL1	Q6ZS30	2694 aa		4.9	□□□□□ -1.62
RPH3A-223	ENST00000552352		A6NN06	94 aa		4.9	□□□□□ -1.63
RPH3A-223	ENST00000552352	NDUFS5	O43920	106 aa		4.9	□□□□□ -1.63
RPH3A-223	ENST00000552352	PLAC8	Q9NZF1	115 aa		4.9	□□□□□ -1.63
RPH3A-223	ENST00000552352	DNAH9	Q9NYC9	4486 aa		4.89	□□□□□ -1.63
RPH3A-223	ENST00000552352	NBDY	A0A0U1RRE5	68 aa		4.89	□□□□□ -1.63
RPH3A-223	ENST00000552352	MOBP	Q13875	183 aa		4.89	□□□□□ -1.63
RPH3A-223	ENST00000552352	PCOTH	Q58A44	107 aa		4.89	□□□□□ -1.63
RPH3A-223	ENST00000552352		Q6ZR54	194 aa		4.89	□□□□□ -1.63
RPH3A-223	ENST00000552352	PHF5A	Q7RTV0	110 aa	Known RBP	4.89	□□□□□ -1.63
RPH3A-223	ENST00000552352		Q6ZRN7	208 aa	Predicted RBP	4.88	□□□□□ -1.63
RPH3A-223	ENST00000552352	MGAM2	Q2M2H8	2515 aa		4.88	□□□□□ -1.63
RPH3A-223	ENST00000552352	RBM12B-AS1	Q9P1G2	102 aa		4.88	□□□□□ -1.63
RPH3A-223	ENST00000552352		Q96NJ1	140 aa		4.87	□□□□□ -1.63
RPH3A-223	ENST00000552352	SPAG11A	Q6PDA7	123 aa		4.87	□□□□□ -1.63
RPH3A-223	ENST00000552352	CHTF8	P0CG12	524 aa		4.86	□□□□□ -1.63
RPH3A-223	ENST00000552352	C8orf17	Q9NRJ1	99 aa		4.86	□□□□□ -1.63
RPH3A-223	ENST00000552352	SRRM2	Q9UQ35	2752 aa	Known RBP	4.86	□□□□□ -1.63
RPH3A-223	ENST00000552352	TENM2	Q9NT68	2774 aa		4.85	□□□□□ -1.63
RPH3A-223	ENST00000552352	KRTAP13-1	Q8IUC0	172 aa		4.85	□□□□□ -1.63
RPH3A-223	ENST00000552352	DNAH10	Q8IVF4	4471 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms