RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 FP248Q71RG6 208 aaPredicted RBP10.53□□□□□ -0.72
PRPF40B-216ENST00000552301 Q8N377 158 aa10.53□□□□□ -0.72
PRPF40B-216ENST00000552301 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.52□□□□□ -0.73
PRPF40B-216ENST00000552301 SMIM29Q86T20 159 aa10.52□□□□□ -0.73
PRPF40B-216ENST00000552301 H0YGX0 51 aa10.51□□□□□ -0.73
PRPF40B-216ENST00000552301 HRCT1Q6UXD1 115 aa10.51□□□□□ -0.73
PRPF40B-216ENST00000552301 LIMD2Q9BT23 127 aa10.5□□□□□ -0.73
PRPF40B-216ENST00000552301 LPAP08519 4548 aa10.49□□□□□ -0.73
PRPF40B-216ENST00000552301 TPRXLQ17RH7 258 aa10.48□□□□□ -0.73
PRPF40B-216ENST00000552301 SMIM6P0DI80 62 aa10.47□□□□□ -0.73
PRPF40B-216ENST00000552301 CD164Q04900 197 aa10.47□□□□□ -0.73
PRPF40B-216ENST00000552301 PPDPFLQ8WWR9 84 aa10.46□□□□□ -0.73
PRPF40B-216ENST00000552301 CDIP1Q9H305 208 aa10.46□□□□□ -0.73
PRPF40B-216ENST00000552301 K7ERJ3 54 aa10.45□□□□□ -0.74
PRPF40B-216ENST00000552301 PSMB2P49721 201 aa10.44□□□□□ -0.74
PRPF40B-216ENST00000552301 OCIAD2Q56VL3 154 aa10.44□□□□□ -0.74
PRPF40B-216ENST00000552301 SNHG12Q9BXW3 62 aa10.44□□□□□ -0.74
PRPF40B-216ENST00000552301 TRIAP1O43715 76 aa10.42□□□□□ -0.74
PRPF40B-216ENST00000552301 FAM218AQ96MZ4 157 aa10.42□□□□□ -0.74
PRPF40B-216ENST00000552301 A0A1B0GX51 115 aa10.41□□□□□ -0.74
PRPF40B-216ENST00000552301 GHRHP01286 108 aa10.41□□□□□ -0.74
PRPF40B-216ENST00000552301 COX6CP09669 75 aa10.41□□□□□ -0.74
PRPF40B-216ENST00000552301 Q6JHZ5 121 aa10.41□□□□□ -0.74
PRPF40B-216ENST00000552301 A0A0G2JQZ4 141 aa10.4□□□□□ -0.74
PRPF40B-216ENST00000552301 DNAL4O96015 105 aa10.37□□□□□ -0.75
PRPF40B-216ENST00000552301 CLEC2BQ92478 149 aa10.37□□□□□ -0.75
PRPF40B-216ENST00000552301 IGLV8-61A0A075B6I0 122 aa10.36□□□□□ -0.75
PRPF40B-216ENST00000552301 M0R143 59 aa10.36□□□□□ -0.75
PRPF40B-216ENST00000552301 KRTAP13-3Q3SY46 172 aa10.35□□□□□ -0.75
PRPF40B-216ENST00000552301 Q5XG85 94 aa10.34□□□□□ -0.75
PRPF40B-216ENST00000552301 IGFL1Q6UW32 110 aa10.34□□□□□ -0.75
PRPF40B-216ENST00000552301 TSTD3H0UI37 97 aa10.33□□□□□ -0.76
PRPF40B-216ENST00000552301 H3BUT2 72 aa10.33□□□□□ -0.76
PRPF40B-216ENST00000552301 TCL1BO95988 128 aa10.33□□□□□ -0.76
PRPF40B-216ENST00000552301 FABP2P12104 132 aa10.33□□□□□ -0.76
PRPF40B-216ENST00000552301 NDUFV3P56181 108 aaKnown RBP10.32□□□□□ -0.76
PRPF40B-216ENST00000552301 SCGB1C2P0DMR2 95 aa10.31□□□□□ -0.76
PRPF40B-216ENST00000552301 ORMDL1Q9P0S3 153 aa10.3□□□□□ -0.76
PRPF40B-216ENST00000552301 LOC105371267A0A1B0GV96 52 aa10.29□□□□□ -0.76
PRPF40B-216ENST00000552301 TRBV7-7A0A0K0K1E9 115 aa10.28□□□□□ -0.76
PRPF40B-216ENST00000552301 H3BQ85 93 aa10.28□□□□□ -0.76
PRPF40B-216ENST00000552301 H3BMG7 143 aa10.26□□□□□ -0.77
PRPF40B-216ENST00000552301 C1orf195Q5TG92 126 aa10.25□□□□□ -0.77
PRPF40B-216ENST00000552301 TRACP01848 142 aa10.23□□□□□ -0.77
PRPF40B-216ENST00000552301 TMEM256-PLSCR3K7ERE1 68 aa10.22□□□□□ -0.77
PRPF40B-216ENST00000552301 LST1O00453 97 aa10.21□□□□□ -0.77
PRPF40B-216ENST00000552301 C9orf92A6NGG3 77 aa10.2□□□□□ -0.78
PRPF40B-216ENST00000552301 LCE2BO14633 110 aa10.2□□□□□ -0.78
PRPF40B-216ENST00000552301 BATFQ16520 125 aa10.2□□□□□ -0.78
PRPF40B-216ENST00000552301 TEN1Q86WV5 123 aa10.2□□□□□ -0.78
PRPF40B-216ENST00000552301 SS18L2Q9UHA2 77 aa10.2□□□□□ -0.78
PRPF40B-216ENST00000552301 MUC2Q02817 5179 aa10.2□□□□□ -0.78
PRPF40B-216ENST00000552301 ASB16-AS1Q495Z4 193 aa10.19□□□□□ -0.78
PRPF40B-216ENST00000552301 Q6Q795 121 aa10.19□□□□□ -0.78
PRPF40B-216ENST00000552301 A0A1B0GV72 72 aa10.18□□□□□ -0.78
PRPF40B-216ENST00000552301 SEC61BP60468 96 aaKnown RBP10.18□□□□□ -0.78
PRPF40B-216ENST00000552301 XP32Q5T750 250 aa10.18□□□□□ -0.78
PRPF40B-216ENST00000552301 NAA38Q9BRA0 125 aaKnown RBP10.17□□□□□ -0.78
PRPF40B-216ENST00000552301 UBE2V1Q13404 147 aa10.16□□□□□ -0.78
PRPF40B-216ENST00000552301 ANKRD29Q8N6D5 301 aa10.16□□□□□ -0.78
PRPF40B-216ENST00000552301 A0A0U1RQV1 116 aa10.15□□□□□ -0.78
PRPF40B-216ENST00000552301 LYRM7Q5U5X0 104 aa10.15□□□□□ -0.78
PRPF40B-216ENST00000552301 MUC17Q685J3 4493 aa10.15□□□□□ -0.78
PRPF40B-216ENST00000552301 ATXN8Q156A1 80 aa10.14□□□□□ -0.79
PRPF40B-216ENST00000552301 A0A087WSZ3 146 aa10.13□□□□□ -0.79
PRPF40B-216ENST00000552301 A0A1W2PNM2 257 aa10.1□□□□□ -0.79
PRPF40B-216ENST00000552301 BAALC-AS2P0C853 105 aa10.1□□□□□ -0.79
PRPF40B-216ENST00000552301 RBM3P98179 157 aaKnown RBP10.07□□□□□ -0.8
PRPF40B-216ENST00000552301 TRBV7-4A0A0J9YYF1 115 aa10.06□□□□□ -0.8
PRPF40B-216ENST00000552301 CCKP06307 115 aa10.06□□□□□ -0.8
PRPF40B-216ENST00000552301 DSCR8Q96T75 97 aa10.06□□□□□ -0.8
PRPF40B-216ENST00000552301 TRBV20-1A0A075B6N2 111 aa10.04□□□□□ -0.8
PRPF40B-216ENST00000552301 VPS25Q9BRG1 176 aa10.04□□□□□ -0.8
PRPF40B-216ENST00000552301 C9orf118A6NHY6 69 aa10.01□□□□□ -0.81
PRPF40B-216ENST00000552301 PCOTHQ58A44 107 aa10□□□□□ -0.81
PRPF40B-216ENST00000552301 SIGMAR1Q99720 223 aa10□□□□□ -0.81
PRPF40B-216ENST00000552301 C9JAW5 83 aa9.99□□□□□ -0.81
PRPF40B-216ENST00000552301 OBSCN-AS1Q96MR7 158 aa9.99□□□□□ -0.81
PRPF40B-216ENST00000552301 FAT4Q6V0I7 4981 aa9.99□□□□□ -0.81
PRPF40B-216ENST00000552301 JMJD7-PLA2G4BH0Y9G9 81 aa9.98□□□□□ -0.81
PRPF40B-216ENST00000552301 TAX1BP3O14907 124 aa9.98□□□□□ -0.81
PRPF40B-216ENST00000552301 RPL37P61927 97 aaKnown RBP9.98□□□□□ -0.81
PRPF40B-216ENST00000552301 Q96NJ1 140 aa9.97□□□□□ -0.81
PRPF40B-216ENST00000552301 A0A1W2PPM0 123 aa9.96□□□□□ -0.82
PRPF40B-216ENST00000552301 C21orf62-AS1Q17RA5 79 aa9.95□□□□□ -0.82
PRPF40B-216ENST00000552301 IGKV4-1P06312 121 aa9.94□□□□□ -0.82
PRPF40B-216ENST00000552301 KRTAP4-1Q9BYQ7 146 aa9.93□□□□□ -0.82
PRPF40B-216ENST00000552301 PDE6GP18545 87 aa9.91□□□□□ -0.82
PRPF40B-216ENST00000552301 LOC110117498A0A087WWA1 95 aa9.89□□□□□ -0.83
PRPF40B-216ENST00000552301 H3BT86 120 aa9.89□□□□□ -0.83
PRPF40B-216ENST00000552301 COL5A1-AS1Q5SY13 56 aa9.89□□□□□ -0.83
PRPF40B-216ENST00000552301 Q6ZQT0 140 aa9.89□□□□□ -0.83
PRPF40B-216ENST00000552301 LINC00472Q9H8W2 130 aa9.89□□□□□ -0.83
PRPF40B-216ENST00000552301 C14orf132Q9NPU4 83 aa9.89□□□□□ -0.83
PRPF40B-216ENST00000552301 DEFB116Q30KQ4 102 aa9.88□□□□□ -0.83
PRPF40B-216ENST00000552301 Q75L30 129 aa9.88□□□□□ -0.83
PRPF40B-216ENST00000552301 DSCR10P59022 87 aa9.87□□□□□ -0.83
PRPF40B-216ENST00000552301 SPCS1Q9Y6A9 102 aa9.87□□□□□ -0.83
PRPF40B-216ENST00000552301 ATP11AUNQ6ZP68 121 aa9.86□□□□□ -0.83
PRPF40B-216ENST00000552301 MTURNQ8N3F0 131 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms