RNA–Protein interactions for RNA: ENST00000551630.1

PTCH1-224, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-224ENST00000551630 NAA38Q9BRA0 125 aaKnown RBP8.9□□□□□ -0.98
PTCH1-224ENST00000551630 COX6CP09669 75 aa8.89□□□□□ -0.99
PTCH1-224ENST00000551630 A0A1B0GX51 115 aa8.87□□□□□ -0.99
PTCH1-224ENST00000551630 SNCGO76070 127 aa8.87□□□□□ -0.99
PTCH1-224ENST00000551630 SCGB1C2P0DMR2 95 aa8.87□□□□□ -0.99
PTCH1-224ENST00000551630 SMCPP49901 116 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-224ENST00000551630 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
PTCH1-224ENST00000551630 PCP4L1A6NKN8 68 aa8.83□□□□□ -1
PTCH1-224ENST00000551630 C4orf48Q5BLP8 95 aa8.83□□□□□ -1
PTCH1-224ENST00000551630 SNHG12Q9BXW3 62 aa8.83□□□□□ -1
PTCH1-224ENST00000551630 F8WEM9 126 aa8.82□□□□□ -1
PTCH1-224ENST00000551630 DNAL4O96015 105 aa8.82□□□□□ -1
PTCH1-224ENST00000551630 OCIAD2Q56VL3 154 aa8.82□□□□□ -1
PTCH1-224ENST00000551630 PPDPFLQ8WWR9 84 aa8.82□□□□□ -1
PTCH1-224ENST00000551630 A0A0G2JQZ4 141 aa8.81□□□□□ -1
PTCH1-224ENST00000551630 LST1O00453 97 aa8.81□□□□□ -1
PTCH1-224ENST00000551630 SPAG11AQ6PDA7 123 aa8.81□□□□□ -1
PTCH1-224ENST00000551630 H3BUT2 72 aa8.8□□□□□ -1
PTCH1-224ENST00000551630 TAX1BP3O14907 124 aa8.8□□□□□ -1
PTCH1-224ENST00000551630 TRACP01848 142 aa8.79□□□□□ -1
PTCH1-224ENST00000551630 HRCT1Q6UXD1 115 aa8.79□□□□□ -1
PTCH1-224ENST00000551630 HMCN2Q8NDA2 5059 aa8.78□□□□□ -1
PTCH1-224ENST00000551630 LCE2BO14633 110 aa8.78□□□□□ -1
PTCH1-224ENST00000551630 TCL1BO95988 128 aa8.78□□□□□ -1
PTCH1-224ENST00000551630 FABP2P12104 132 aa8.78□□□□□ -1
PTCH1-224ENST00000551630 ORMDL1Q9P0S3 153 aa8.78□□□□□ -1
PTCH1-224ENST00000551630 C9orf118A6NHY6 69 aa8.77□□□□□ -1.01
PTCH1-224ENST00000551630 SPINK1P00995 79 aa8.77□□□□□ -1.01
PTCH1-224ENST00000551630 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
PTCH1-224ENST00000551630 IGLV8-61A0A075B6I0 122 aa8.75□□□□□ -1.01
PTCH1-224ENST00000551630 GHRHP01286 108 aa8.75□□□□□ -1.01
PTCH1-224ENST00000551630 NDUFV3P56181 108 aaKnown RBP8.75□□□□□ -1.01
PTCH1-224ENST00000551630 ATXN8Q156A1 80 aa8.75□□□□□ -1.01
PTCH1-224ENST00000551630 LYRM7Q5U5X0 104 aa8.75□□□□□ -1.01
PTCH1-224ENST00000551630 IGFL1Q6UW32 110 aa8.74□□□□□ -1.01
PTCH1-224ENST00000551630 A0A1B0GV72 72 aa8.73□□□□□ -1.01
PTCH1-224ENST00000551630 PRR4Q16378 134 aa8.73□□□□□ -1.01
PTCH1-224ENST00000551630 A0A1W2PPM0 123 aa8.72□□□□□ -1.01
PTCH1-224ENST00000551630 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
PTCH1-224ENST00000551630 COL5A1-AS1Q5SY13 56 aa8.72□□□□□ -1.01
PTCH1-224ENST00000551630 Q6JHZ5 121 aa8.72□□□□□ -1.01
PTCH1-224ENST00000551630 H3BQ85 93 aa8.71□□□□□ -1.02
PTCH1-224ENST00000551630 TMEM256-PLSCR3K7ERE1 68 aa8.71□□□□□ -1.02
PTCH1-224ENST00000551630 CD164Q04900 197 aa8.71□□□□□ -1.02
PTCH1-224ENST00000551630 H3BMG7 143 aa8.7□□□□□ -1.02
PTCH1-224ENST00000551630 TRBV20-1A0A075B6N2 111 aa8.69□□□□□ -1.02
PTCH1-224ENST00000551630 BAALC-AS2P0C853 105 aa8.68□□□□□ -1.02
PTCH1-224ENST00000551630 UBE2V1Q13404 147 aa8.67□□□□□ -1.02
PTCH1-224ENST00000551630 LIMD2Q9BT23 127 aa8.67□□□□□ -1.02
PTCH1-224ENST00000551630 C9JAW5 83 aa8.65□□□□□ -1.02
PTCH1-224ENST00000551630 ANKRD29Q8N6D5 301 aa8.65□□□□□ -1.02
PTCH1-224ENST00000551630 TRBV7-7A0A0K0K1E9 115 aa8.64□□□□□ -1.03
PTCH1-224ENST00000551630 SPCS1Q9Y6A9 102 aa8.64□□□□□ -1.03
PTCH1-224ENST00000551630 MTURNQ8N3F0 131 aa8.63□□□□□ -1.03
PTCH1-224ENST00000551630 IGLV7-46A0A075B6I9 117 aa8.62□□□□□ -1.03
PTCH1-224ENST00000551630 Q5XG85 94 aa8.61□□□□□ -1.03
PTCH1-224ENST00000551630 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
PTCH1-224ENST00000551630 LPAP08519 4548 aa8.6□□□□□ -1.03
PTCH1-224ENST00000551630 A0A1W2PNM2 257 aa8.59□□□□□ -1.03
PTCH1-224ENST00000551630 Q6Q795 121 aa8.59□□□□□ -1.03
PTCH1-224ENST00000551630 TEN1Q86WV5 123 aa8.59□□□□□ -1.03
PTCH1-224ENST00000551630 RBM3P98179 157 aaKnown RBP8.58□□□□□ -1.04
PTCH1-224ENST00000551630 LRP2P98164 4655 aa8.57□□□□□ -1.04
PTCH1-224ENST00000551630 TRBV7-4A0A0J9YYF1 115 aa8.57□□□□□ -1.04
PTCH1-224ENST00000551630 A0A087WSZ3 146 aa8.56□□□□□ -1.04
PTCH1-224ENST00000551630 H3BT86 120 aa8.56□□□□□ -1.04
PTCH1-224ENST00000551630 K7EP34 96 aa8.56□□□□□ -1.04
PTCH1-224ENST00000551630 C1orf195Q5TG92 126 aa8.56□□□□□ -1.04
PTCH1-224ENST00000551630 CCKP06307 115 aa8.55□□□□□ -1.04
PTCH1-224ENST00000551630 DSCR8Q96T75 97 aa8.55□□□□□ -1.04
PTCH1-224ENST00000551630 JMJD7-PLA2G4BH0Y9G9 81 aa8.54□□□□□ -1.04
PTCH1-224ENST00000551630 TPRXLQ17RH7 258 aa8.54□□□□□ -1.04
PTCH1-224ENST00000551630 VPS25Q9BRG1 176 aa8.53□□□□□ -1.04
PTCH1-224ENST00000551630 ASB16-AS1Q495Z4 193 aa8.52□□□□□ -1.05
PTCH1-224ENST00000551630 C14orf132Q9NPU4 83 aa8.52□□□□□ -1.05
PTCH1-224ENST00000551630 KRTAP13-3Q3SY46 172 aa8.51□□□□□ -1.05
PTCH1-224ENST00000551630 SS18L2Q9UHA2 77 aa8.51□□□□□ -1.05
PTCH1-224ENST00000551630 OBSCN-AS1Q96MR7 158 aa8.5□□□□□ -1.05
PTCH1-224ENST00000551630 Q6ZQT0 140 aa8.49□□□□□ -1.05
PTCH1-224ENST00000551630 PRO0461Q9UI25 63 aa8.49□□□□□ -1.05
PTCH1-224ENST00000551630 LOC110117498A0A087WWA1 95 aa8.48□□□□□ -1.05
PTCH1-224ENST00000551630 GTF2H5Q6ZYL4 71 aa8.48□□□□□ -1.05
PTCH1-224ENST00000551630 CDIP1Q9H305 208 aa8.48□□□□□ -1.05
PTCH1-224ENST00000551630 Q96NJ1 140 aa8.45□□□□□ -1.06
PTCH1-224ENST00000551630 UBR4Q5T4S7 5183 aa8.45□□□□□ -1.06
PTCH1-224ENST00000551630 C9orf92A6NGG3 77 aa8.44□□□□□ -1.06
PTCH1-224ENST00000551630 PDE6GP18545 87 aa8.43□□□□□ -1.06
PTCH1-224ENST00000551630 DEFB116Q30KQ4 102 aa8.39□□□□□ -1.07
PTCH1-224ENST00000551630 XP32Q5T750 250 aa8.39□□□□□ -1.07
PTCH1-224ENST00000551630 SIGMAR1Q99720 223 aa8.39□□□□□ -1.07
PTCH1-224ENST00000551630 LINC00472Q9H8W2 130 aa8.38□□□□□ -1.07
PTCH1-224ENST00000551630 F8W1H4 67 aa8.37□□□□□ -1.07
PTCH1-224ENST00000551630 IGKV4-1P06312 121 aa8.37□□□□□ -1.07
PTCH1-224ENST00000551630 A0A1B0GV90 55 aa8.36□□□□□ -1.07
PTCH1-224ENST00000551630 C21orf62-AS1Q17RA5 79 aa8.36□□□□□ -1.07
PTCH1-224ENST00000551630 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
PTCH1-224ENST00000551630 A0A1B0GW54 56 aa8.35□□□□□ -1.07
PTCH1-224ENST00000551630 MUC17Q685J3 4493 aa8.35□□□□□ -1.07
PTCH1-224ENST00000551630 ETDBQ3ZM63 59 aa8.33□□□□□ -1.08
PTCH1-224ENST00000551630 DSCR10P59022 87 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms