RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.33□□□□□ -2.62
SCAF11-215ENST00000551391 NBEAL2Q6ZNJ1 2754 aa-1.33□□□□□ -2.62
SCAF11-215ENST00000551391 ACACBO00763 2458 aa-1.34□□□□□ -2.62
SCAF11-215ENST00000551391 ATP7BP35670 1465 aa-1.34□□□□□ -2.62
SCAF11-215ENST00000551391 MMP24-AS1A0A0U1RRL7 71 aa-1.34□□□□□ -2.62
SCAF11-215ENST00000551391 IQCF6A8MYZ5 107 aa-1.34□□□□□ -2.62
SCAF11-215ENST00000551391 IFI6P09912 130 aa-1.34□□□□□ -2.62
SCAF11-215ENST00000551391 IAPPP10997 89 aa-1.34□□□□□ -2.62
SCAF11-215ENST00000551391 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.34□□□□□ -2.62
SCAF11-215ENST00000551391 EPRSP07814 1512 aaKnown RBP-1.35□□□□□ -2.62
SCAF11-215ENST00000551391 C20orf202A1L168 122 aa-1.35□□□□□ -2.63
SCAF11-215ENST00000551391 MT2AP02795 61 aa-1.35□□□□□ -2.63
SCAF11-215ENST00000551391 MT1GP13640 62 aa-1.35□□□□□ -2.63
SCAF11-215ENST00000551391 SARNPP82979 210 aaKnown RBP-1.35□□□□□ -2.63
SCAF11-215ENST00000551391 QSER1Q2KHR3 1735 aa-1.35□□□□□ -2.63
SCAF11-215ENST00000551391 LRRK2Q5S007 2527 aa-1.35□□□□□ -2.63
SCAF11-215ENST00000551391 UQCRHLA0A096LP55 91 aa-1.36□□□□□ -2.63
SCAF11-215ENST00000551391 PLGLAQ15195 96 aa-1.36□□□□□ -2.63
SCAF11-215ENST00000551391 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.36□□□□□ -2.63
SCAF11-215ENST00000551391 PMCHL2Q9BQD1 86 aa-1.36□□□□□ -2.63
SCAF11-215ENST00000551391 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.36□□□□□ -2.63
SCAF11-215ENST00000551391 SMG1Q96Q15 3661 aaKnown RBP-1.36□□□□□ -2.63
SCAF11-215ENST00000551391 ACACAQ13085 2346 aa-1.37□□□□□ -2.63
SCAF11-215ENST00000551391 TRAV21A0A0B4J279 112 aa-1.37□□□□□ -2.63
SCAF11-215ENST00000551391 CYB5AP00167 134 aa-1.37□□□□□ -2.63
SCAF11-215ENST00000551391 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.37□□□□□ -2.63
SCAF11-215ENST00000551391 NWD1Q149M9 1564 aa-1.38□□□□□ -2.63
SCAF11-215ENST00000551391 IGLV5-48A0A075B6I7 105 aa-1.38□□□□□ -2.63
SCAF11-215ENST00000551391 HMGN2P05204 90 aaKnown RBP-1.38□□□□□ -2.63
SCAF11-215ENST00000551391 WFDC9Q8NEX5 89 aa-1.38□□□□□ -2.63
SCAF11-215ENST00000551391 PKD1L2Q7Z442 2459 aa-1.38□□□□□ -2.63
SCAF11-215ENST00000551391 FANCAO15360 1455 aa-1.38□□□□□ -2.63
SCAF11-215ENST00000551391 COL6A5A8TX70 2615 aa-1.38□□□□□ -2.63
SCAF11-215ENST00000551391 SRCAPQ6ZRS2 3230 aa-1.39□□□□□ -2.63
SCAF11-215ENST00000551391 CDC42BPAQ5VT25 1732 aa-1.39□□□□□ -2.63
SCAF11-215ENST00000551391 MT-ATP8P03928 68 aa-1.39□□□□□ -2.63
SCAF11-215ENST00000551391 MT1BP07438 61 aa-1.39□□□□□ -2.63
SCAF11-215ENST00000551391 KIF20BQ96Q89 1820 aa-1.39□□□□□ -2.63
SCAF11-215ENST00000551391 PLIN4Q96Q06 1357 aa-1.39□□□□□ -2.63
SCAF11-215ENST00000551391 SCN11AQ9UI33 1791 aa-1.39□□□□□ -2.63
SCAF11-215ENST00000551391 ITPR1Q14643 2758 aa-1.4□□□□□ -2.63
SCAF11-215ENST00000551391 SPTBN5Q9NRC6 3674 aaKnown RBP-1.4□□□□□ -2.63
SCAF11-215ENST00000551391 BPTFQ12830 3046 aa-1.4□□□□□ -2.63
SCAF11-215ENST00000551391 NDUFB1O75438 58 aa-1.4□□□□□ -2.63
SCAF11-215ENST00000551391 COL5A1-AS1Q5SY13 56 aa-1.4□□□□□ -2.63
SCAF11-215ENST00000551391 TEX14Q8IWB6 1497 aa-1.4□□□□□ -2.63
SCAF11-215ENST00000551391 RGPD2P0DJD1 1756 aa-1.4□□□□□ -2.63
SCAF11-215ENST00000551391 CDC42BPGQ6DT37 1551 aa-1.41□□□□□ -2.63
SCAF11-215ENST00000551391 NESP48681 1621 aa-1.41□□□□□ -2.64
SCAF11-215ENST00000551391 SPENQ96T58 3664 aaKnown RBP-1.42□□□□□ -2.64
SCAF11-215ENST00000551391 CCDC168Q8NDH2 2452 aa-1.42□□□□□ -2.64
SCAF11-215ENST00000551391 ATP10BO94823 1461 aa-1.42□□□□□ -2.64
SCAF11-215ENST00000551391 FYCO1Q9BQS8 1478 aa-1.42□□□□□ -2.64
SCAF11-215ENST00000551391 CRYBG1Q9Y4K1 1723 aa-1.42□□□□□ -2.64
SCAF11-215ENST00000551391 LINC00032P0C843 101 aa-1.42□□□□□ -2.64
SCAF11-215ENST00000551391 FAUP35544 74 aaKnown RBP-1.42□□□□□ -2.64
SCAF11-215ENST00000551391 SMIM11AP58511 58 aa-1.42□□□□□ -2.64
SCAF11-215ENST00000551391 WT1-ASQ06250 92 aa-1.42□□□□□ -2.64
SCAF11-215ENST00000551391 PDE4DIPQ5VU43 2346 aa-1.42□□□□□ -2.64
SCAF11-215ENST00000551391 TIAM2Q8IVF5 1701 aa-1.43□□□□□ -2.64
SCAF11-215ENST00000551391 ACYP1P07311 99 aa-1.43□□□□□ -2.64
SCAF11-215ENST00000551391 ZNF831Q5JPB2 1677 aa-1.43□□□□□ -2.64
SCAF11-215ENST00000551391 CCDC88BA6NC98 1476 aa-1.43□□□□□ -2.64
SCAF11-215ENST00000551391 DIP2BQ9P265 1576 aa-1.44□□□□□ -2.64
SCAF11-215ENST00000551391 RGPD1P0DJD0 1748 aa-1.44□□□□□ -2.64
SCAF11-215ENST00000551391 NEXMIFQ5QGS0 1516 aa-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 CCNB3Q8WWL7 1395 aa-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 PKD1L3Q7Z443 1732 aa-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 THOC2Q8NI27 1593 aaKnown RBP-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 FAM186AA6NE01 2351 aa-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 DEFB131BA0A096LNP1 70 aa-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 IFI27P40305 119 aaPredicted RBP-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 PEA15Q15121 130 aa-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 KRTAP20-1Q3LI63 56 aa-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 NCOA2Q15596 1464 aa-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 CEP295Q9C0D2 2601 aa-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 TRRAPQ9Y4A5 3859 aa-1.45□□□□□ -2.64
SCAF11-215ENST00000551391 RIF1Q5UIP0 2472 aaKnown RBP-1.46□□□□□ -2.64
SCAF11-215ENST00000551391 MYMXA0A1B0GTQ4 84 aa-1.46□□□□□ -2.64
SCAF11-215ENST00000551391 NDUFA4O00483 81 aa-1.46□□□□□ -2.64
SCAF11-215ENST00000551391 DPY30Q9C005 99 aa-1.46□□□□□ -2.64
SCAF11-215ENST00000551391 TOGARAM1Q9Y4F4 1720 aa-1.46□□□□□ -2.64
SCAF11-215ENST00000551391 UBR3Q6ZT12 1888 aa-1.47□□□□□ -2.64
SCAF11-215ENST00000551391 CLTCQ00610 1675 aaKnown RBP-1.47□□□□□ -2.64
SCAF11-215ENST00000551391 S100A10P60903 97 aa-1.47□□□□□ -2.64
SCAF11-215ENST00000551391 BVES-AS1Q5T3Y7 98 aa-1.47□□□□□ -2.64
SCAF11-215ENST00000551391 NOP10Q9NPE3 64 aaKnown RBP-1.47□□□□□ -2.64
SCAF11-215ENST00000551391 RABAC1Q9UI14 185 aa-1.47□□□□□ -2.64
SCAF11-215ENST00000551391 URB2Q14146 1524 aaKnown RBP-1.47□□□□□ -2.64
SCAF11-215ENST00000551391 KIAA0586Q9BVV6 1533 aa-1.47□□□□□ -2.64
SCAF11-215ENST00000551391 LRBAP50851 2863 aa-1.48□□□□□ -2.65
SCAF11-215ENST00000551391 POLR1AO95602 1720 aaPredicted RBP-1.48□□□□□ -2.65
SCAF11-215ENST00000551391 MGAQ8IWI9 3026 aa-1.48□□□□□ -2.65
SCAF11-215ENST00000551391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.48□□□□□ -2.65
SCAF11-215ENST00000551391 LINC01546A6NGU7 62 aa-1.48□□□□□ -2.65
SCAF11-215ENST00000551391 UMAD1C9J7I0 102 aa-1.48□□□□□ -2.65
SCAF11-215ENST00000551391 MRPL33O75394 65 aaKnown RBP-1.48□□□□□ -2.65
SCAF11-215ENST00000551391 GYPAP02724 150 aa-1.48□□□□□ -2.65
SCAF11-215ENST00000551391 RPS27P42677 84 aaKnown RBP-1.48□□□□□ -2.65
SCAF11-215ENST00000551391 RPS27LQ71UM5 84 aaKnown RBP-1.48□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms