RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 BRCA2P51587 3418 aa7.99□□□□□ -1.13
RAB3IP-212ENST00000550536 CD164Q04900 197 aa7.98□□□□□ -1.13
RAB3IP-212ENST00000550536 CASC10Q5T4H9 136 aa7.97□□□□□ -1.13
RAB3IP-212ENST00000550536 A0A1W2PNM2 257 aa7.95□□□□□ -1.14
RAB3IP-212ENST00000550536 NBEAL2Q6ZNJ1 2754 aa7.95□□□□□ -1.14
RAB3IP-212ENST00000550536 CHD9Q3L8U1 2897 aa7.95□□□□□ -1.14
RAB3IP-212ENST00000550536 KRTAP1-3Q8IUG1 177 aa7.93□□□□□ -1.14
RAB3IP-212ENST00000550536 LUZP6Q538Z0 58 aa7.93□□□□□ -1.14
RAB3IP-212ENST00000550536 CELSR3Q9NYQ7 3312 aa7.93□□□□□ -1.14
RAB3IP-212ENST00000550536 Q6ZSA8 131 aa7.92□□□□□ -1.14
RAB3IP-212ENST00000550536 WDFY4Q6ZS81 3184 aa7.92□□□□□ -1.14
RAB3IP-212ENST00000550536 LCA10Q71F78 164 aa7.92□□□□□ -1.14
RAB3IP-212ENST00000550536 FRYLO94915 3013 aa7.91□□□□□ -1.14
RAB3IP-212ENST00000550536 DNAH14Q0VDD8 3507 aa7.91□□□□□ -1.14
RAB3IP-212ENST00000550536 Q1T7F1 81 aa7.91□□□□□ -1.14
RAB3IP-212ENST00000550536 BAHCC1Q9P281 2608 aa7.91□□□□□ -1.14
RAB3IP-212ENST00000550536 OCR1Q9BZK8 76 aa7.9□□□□□ -1.15
RAB3IP-212ENST00000550536 LRBAP50851 2863 aa7.89□□□□□ -1.15
RAB3IP-212ENST00000550536 UTP20O75691 2785 aaKnown RBP7.89□□□□□ -1.15
RAB3IP-212ENST00000550536 HTTP42858 3142 aa7.88□□□□□ -1.15
RAB3IP-212ENST00000550536 KRTAP1-1Q07627 177 aa7.86□□□□□ -1.15
RAB3IP-212ENST00000550536 PRR26Q8N8Z3 221 aa7.86□□□□□ -1.15
RAB3IP-212ENST00000550536 LINC00483Q53H64 154 aa7.86□□□□□ -1.15
RAB3IP-212ENST00000550536 IGSF10Q6WRI0 2623 aa7.86□□□□□ -1.15
RAB3IP-212ENST00000550536 FAM229BQ4G0N7 80 aa7.85□□□□□ -1.15
RAB3IP-212ENST00000550536 CDH23Q9H251 3354 aa7.85□□□□□ -1.15
RAB3IP-212ENST00000550536 IGLV7-46A0A075B6I9 117 aa7.84□□□□□ -1.15
RAB3IP-212ENST00000550536 KALRNO60229 2985 aa7.84□□□□□ -1.16
RAB3IP-212ENST00000550536 TNP2Q05952 138 aa7.83□□□□□ -1.16
RAB3IP-212ENST00000550536 A0A1B0GU33 70 aa7.83□□□□□ -1.16
RAB3IP-212ENST00000550536 M0R2T5 61 aa7.82□□□□□ -1.16
RAB3IP-212ENST00000550536 CAMK2N1Q7Z7J9 78 aa7.82□□□□□ -1.16
RAB3IP-212ENST00000550536 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.82□□□□□ -1.16
RAB3IP-212ENST00000550536 USP34Q70CQ2 3546 aa7.81□□□□□ -1.16
RAB3IP-212ENST00000550536 LAMA1P25391 3075 aa7.8□□□□□ -1.16
RAB3IP-212ENST00000550536 Q75L30 129 aa7.79□□□□□ -1.16
RAB3IP-212ENST00000550536 S4R3F8 94 aa7.79□□□□□ -1.16
RAB3IP-212ENST00000550536 HRES1P13985 223 aa7.78□□□□□ -1.16
RAB3IP-212ENST00000550536 NSD1Q96L73 2696 aaPredicted RBP7.77□□□□□ -1.17
RAB3IP-212ENST00000550536 FREM2Q5SZK8 3169 aa7.75□□□□□ -1.17
RAB3IP-212ENST00000550536 WIPF1O43516 503 aa7.75□□□□□ -1.17
RAB3IP-212ENST00000550536 ZCCHC13Q8WW36 166 aaKnown RBP7.74□□□□□ -1.17
RAB3IP-212ENST00000550536 UBR5O95071 2799 aaPredicted RBP7.74□□□□□ -1.17
RAB3IP-212ENST00000550536 PLAC8Q9NZF1 115 aa7.74□□□□□ -1.17
RAB3IP-212ENST00000550536 ITPR1Q14643 2758 aa7.73□□□□□ -1.17
RAB3IP-212ENST00000550536 DMAC1Q96GE9 116 aa7.71□□□□□ -1.17
RAB3IP-212ENST00000550536 REV3LO60673 3130 aa7.71□□□□□ -1.18
RAB3IP-212ENST00000550536 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
RAB3IP-212ENST00000550536 TACC2O95359 2948 aa7.68□□□□□ -1.18
RAB3IP-212ENST00000550536 MMP24-AS1A0A0U1RRL7 71 aa7.68□□□□□ -1.18
RAB3IP-212ENST00000550536 FLNCQ14315 2725 aa7.66□□□□□ -1.18
RAB3IP-212ENST00000550536 SPRR1AP35321 89 aa7.64□□□□□ -1.19
RAB3IP-212ENST00000550536 Q5W150 140 aa7.64□□□□□ -1.19
RAB3IP-212ENST00000550536 COL6A3P12111 3177 aa7.64□□□□□ -1.19
RAB3IP-212ENST00000550536 CRYBG3Q68DQ2 2970 aa7.63□□□□□ -1.19
RAB3IP-212ENST00000550536 UNC80Q8N2C7 3258 aa7.62□□□□□ -1.19
RAB3IP-212ENST00000550536 LINC01558Q9Y6Z2 57 aa7.61□□□□□ -1.19
RAB3IP-212ENST00000550536 R4GN34 69 aa7.61□□□□□ -1.19
RAB3IP-212ENST00000550536 LINC00472Q9H8W2 130 aa7.61□□□□□ -1.19
RAB3IP-212ENST00000550536 ASH1LQ9NR48 2969 aaKnown RBP7.61□□□□□ -1.19
RAB3IP-212ENST00000550536 Q8N9P0 234 aaPredicted RBP7.6□□□□□ -1.19
RAB3IP-212ENST00000550536 VCANP13611 3396 aa7.6□□□□□ -1.19
RAB3IP-212ENST00000550536 BOD1L1Q8NFC6 3051 aa7.6□□□□□ -1.19
RAB3IP-212ENST00000550536 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.19
RAB3IP-212ENST00000550536 NBEAQ8NFP9 2946 aa7.59□□□□□ -1.19
RAB3IP-212ENST00000550536 SPTBN5Q9NRC6 3674 aaKnown RBP7.59□□□□□ -1.19
RAB3IP-212ENST00000550536 Q8NDZ9 215 aa7.58□□□□□ -1.2
RAB3IP-212ENST00000550536 SPINK7P58062 85 aa7.57□□□□□ -1.2
RAB3IP-212ENST00000550536 Q5VSD8 79 aa7.57□□□□□ -1.2
RAB3IP-212ENST00000550536 DMXL2Q8TDJ6 3036 aa7.55□□□□□ -1.2
RAB3IP-212ENST00000550536 SPRR1BP22528 89 aa7.55□□□□□ -1.2
RAB3IP-212ENST00000550536 Q5VV11 94 aa7.54□□□□□ -1.2
RAB3IP-212ENST00000550536 HIVEP1P15822 2718 aa7.53□□□□□ -1.2
RAB3IP-212ENST00000550536 ZZEF1O43149 2961 aa7.53□□□□□ -1.2
RAB3IP-212ENST00000550536 Q5XG85 94 aa7.52□□□□□ -1.21
RAB3IP-212ENST00000550536 KRTAP1-5Q9BYS1 174 aa7.5□□□□□ -1.21
RAB3IP-212ENST00000550536 FP248Q71RG6 208 aaPredicted RBP7.49□□□□□ -1.21
RAB3IP-212ENST00000550536 SZT2Q5T011 3432 aa7.49□□□□□ -1.21
RAB3IP-212ENST00000550536 COL12A1Q99715 3063 aa7.48□□□□□ -1.21
RAB3IP-212ENST00000550536 CYSTM1Q9H1C7 97 aa7.48□□□□□ -1.21
RAB3IP-212ENST00000550536 A0A0A0MQY5 61 aa7.48□□□□□ -1.21
RAB3IP-212ENST00000550536 CELSR2Q9HCU4 2923 aa7.47□□□□□ -1.21
RAB3IP-212ENST00000550536 ROMO1P60602 79 aa7.46□□□□□ -1.21
RAB3IP-212ENST00000550536 KRTAP26-1Q6PEX3 210 aa7.46□□□□□ -1.21
RAB3IP-212ENST00000550536 RPL37P61927 97 aaKnown RBP7.45□□□□□ -1.22
RAB3IP-212ENST00000550536 PRAC1Q96KF2 57 aa7.44□□□□□ -1.22
RAB3IP-212ENST00000550536 M0QZ58 72 aa7.44□□□□□ -1.22
RAB3IP-212ENST00000550536 ADGRG4Q8IZF6 3080 aa7.43□□□□□ -1.22
RAB3IP-212ENST00000550536 KRTAP10-1P60331 282 aa7.42□□□□□ -1.22
RAB3IP-212ENST00000550536 H1FX-AS1Q4G0G2 97 aa7.42□□□□□ -1.22
RAB3IP-212ENST00000550536 SPEGQ15772 3267 aa7.42□□□□□ -1.22
RAB3IP-212ENST00000550536 Q6ZR54 194 aa7.42□□□□□ -1.22
RAB3IP-212ENST00000550536 LCE6AA0A183 80 aa7.41□□□□□ -1.22
RAB3IP-212ENST00000550536 KRTAP10-2P60368 255 aa7.41□□□□□ -1.22
RAB3IP-212ENST00000550536 CFAP47Q6ZTR5 3102 aa7.38□□□□□ -1.23
RAB3IP-212ENST00000550536 PLAC4Q8WY50 150 aa7.38□□□□□ -1.23
RAB3IP-212ENST00000550536 ADM2Q7Z4H4 148 aa7.38□□□□□ -1.23
RAB3IP-212ENST00000550536 TENM1Q9UKZ4 2725 aa7.38□□□□□ -1.23
RAB3IP-212ENST00000550536 TNRC18O15417 2968 aaPredicted RBP7.36□□□□□ -1.23
RAB3IP-212ENST00000550536 H3BS24 57 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms