RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 A0A1W2PNM2 257 aa2.09□□□□□ -2.07
CCNT1-203ENST00000550457 A6NN06 94 aa2.09□□□□□ -2.07
CCNT1-203ENST00000550457 H3BNG1 76 aa2.09□□□□□ -2.07
CCNT1-203ENST00000550457 C3orf84H3BNL1 204 aa2.09□□□□□ -2.07
CCNT1-203ENST00000550457 CLPSL2Q6UWE3 100 aa2.09□□□□□ -2.07
CCNT1-203ENST00000550457 C7orf65Q6ZTY9 151 aa2.09□□□□□ -2.07
CCNT1-203ENST00000550457 NKAPP1Q8N9T2 125 aa2.09□□□□□ -2.07
CCNT1-203ENST00000550457 CAMK2N2Q96S95 79 aa2.09□□□□□ -2.07
CCNT1-203ENST00000550457 KLK12Q9UKR0 248 aa2.09□□□□□ -2.07
CCNT1-203ENST00000550457 SVEP1Q4LDE5 3571 aa2.09□□□□□ -2.07
CCNT1-203ENST00000550457 GCN1Q92616 2671 aaKnown RBP2.09□□□□□ -2.08
CCNT1-203ENST00000550457 CELSR1Q9NYQ6 3014 aa2.09□□□□□ -2.08
CCNT1-203ENST00000550457 NIPBLQ6KC79 2804 aaeCLIP2.09□□□□□ -2.08
CCNT1-203ENST00000550457 AKAP9Q99996 3911 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 CFAP46Q8IYW2 2715 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 IGLV8-61A0A075B6I0 122 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 IGKV2D-24A0A075B6R9 120 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 LRCOL1A6NCL2 159 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 C16orf90A8MZG2 172 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 TLX1NBP0CAT3 122 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 Q6ZRX8 168 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 LCA10Q71F78 164 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 PRR15LQ9BU68 103 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 WFDC10AQ9H1F0 79 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 XAGE1AQ9HD64 81 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 CSMD1Q96PZ7 3565 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 CENPEQ02224 2701 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 MUC6Q6W4X9 2439 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 ZFYVE26Q68DK2 2539 aa2.08□□□□□ -2.08
CCNT1-203ENST00000550457 ACACBO00763 2458 aa2.07□□□□□ -2.08
CCNT1-203ENST00000550457 A6NED7 52 aa2.07□□□□□ -2.08
CCNT1-203ENST00000550457 SPART-AS1P0CW21 52 aa2.07□□□□□ -2.08
CCNT1-203ENST00000550457 SPRR1AP35321 89 aa2.07□□□□□ -2.08
CCNT1-203ENST00000550457 APOC4P55056 127 aa2.07□□□□□ -2.08
CCNT1-203ENST00000550457 C9orf163Q8N9P6 203 aa2.07□□□□□ -2.08
CCNT1-203ENST00000550457 SPTSSBQ8NFR3 76 aa2.07□□□□□ -2.08
CCNT1-203ENST00000550457 TP53AIP1Q9HCN2 124 aa2.07□□□□□ -2.08
CCNT1-203ENST00000550457 LINC01558Q9Y6Z2 57 aa2.07□□□□□ -2.08
CCNT1-203ENST00000550457 ITPR3Q14573 2671 aa2.07□□□□□ -2.08
CCNT1-203ENST00000550457 SETD2Q9BYW2 2564 aaPredicted RBP2.06□□□□□ -2.08
CCNT1-203ENST00000550457 ZANQ9Y493 2812 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 LRRK2Q5S007 2527 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 KRTAP4-16G5E9R7 235 aaPredicted RBP2.06□□□□□ -2.08
CCNT1-203ENST00000550457 H0Y9P7 68 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 K7EQZ3 153 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 CNBPP62633 177 aaKnown RBP2.06□□□□□ -2.08
CCNT1-203ENST00000550457 KRTAP11-1Q8IUC1 163 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 ST20-AS1Q8NBB2 130 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 DEFB105AQ8NG35 78 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 C7orf33Q8WU49 177 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 PLAC8Q9NZF1 115 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 APCP25054 2843 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 CELSR2Q9HCU4 2923 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 MUC3AQ02505 3323 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 CACNA1AO00555 2505 aa2.06□□□□□ -2.08
CCNT1-203ENST00000550457 ANKRD17O75179 2603 aaKnown RBP2.05□□□□□ -2.08
CCNT1-203ENST00000550457 NBEAL2Q6ZNJ1 2754 aa2.05□□□□□ -2.08
CCNT1-203ENST00000550457 NCOR2Q9Y618 2525 aa2.05□□□□□ -2.08
CCNT1-203ENST00000550457 IGLV1-50A0A075B6I6 118 aa2.05□□□□□ -2.08
CCNT1-203ENST00000550457 A8MWP4 228 aa2.05□□□□□ -2.08
CCNT1-203ENST00000550457 CASC2Q6XLA1 102 aa2.05□□□□□ -2.08
CCNT1-203ENST00000550457 COA5Q86WW8 74 aa2.05□□□□□ -2.08
CCNT1-203ENST00000550457 CHD8Q9HCK8 2581 aa2.05□□□□□ -2.08
CCNT1-203ENST00000550457 COL12A1Q99715 3063 aa2.05□□□□□ -2.08
CCNT1-203ENST00000550457 TEX15Q9BXT5 2789 aa2.04□□□□□ -2.08
CCNT1-203ENST00000550457 NF1P21359 2839 aa2.04□□□□□ -2.08
CCNT1-203ENST00000550457 DEFB131BA0A096LNP1 70 aa2.04□□□□□ -2.08
CCNT1-203ENST00000550457 A0A096LPF7 62 aa2.04□□□□□ -2.08
CCNT1-203ENST00000550457 PTPN13Q12923 2485 aa2.04□□□□□ -2.08
CCNT1-203ENST00000550457 KRTAP26-1Q6PEX3 210 aa2.04□□□□□ -2.08
CCNT1-203ENST00000550457 C15orf56Q8N910 161 aa2.04□□□□□ -2.08
CCNT1-203ENST00000550457 HIVEP2P31629 2446 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 RELNP78509 3460 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 CRYBG3Q68DQ2 2970 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 POLQO75417 2590 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 H0Y9J4 135 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 PRB1P04280 392 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 MOBPQ13875 183 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 PRR4Q16378 134 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 DEFB113Q30KQ7 82 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 LINC01556Q5JQF7 62 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 Q8NAQ8 132 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 VPS13CQ709C8 3753 aa2.03□□□□□ -2.08
CCNT1-203ENST00000550457 SPTBN4Q9H254 2564 aa2.03□□□□□ -2.09
CCNT1-203ENST00000550457 ABCA12Q86UK0 2595 aa2.02□□□□□ -2.09
CCNT1-203ENST00000550457 C8orf87E5RJ46 101 aa2.02□□□□□ -2.09
CCNT1-203ENST00000550457 SPRR1BP22528 89 aa2.02□□□□□ -2.09
CCNT1-203ENST00000550457 RPL37AP61513 92 aaKnown RBP2.02□□□□□ -2.09
CCNT1-203ENST00000550457 REG3GQ6UW15 175 aa2.02□□□□□ -2.09
CCNT1-203ENST00000550457 IGFL1Q6UW32 110 aa2.02□□□□□ -2.09
CCNT1-203ENST00000550457 WFDC10BQ8IUB3 73 aa2.02□□□□□ -2.09
CCNT1-203ENST00000550457 WFDC13Q8IUB5 93 aa2.02□□□□□ -2.09
CCNT1-203ENST00000550457 LINC00472Q9H8W2 130 aa2.02□□□□□ -2.09
CCNT1-203ENST00000550457 FN1P02751 2386 aaKnown RBP2.02□□□□□ -2.09
CCNT1-203ENST00000550457 CR1P17927 2039 aa2.01□□□□□ -2.09
CCNT1-203ENST00000550457 PKD1L2Q7Z442 2459 aa2.01□□□□□ -2.09
CCNT1-203ENST00000550457 A0A087WSZ3 146 aa2.01□□□□□ -2.09
CCNT1-203ENST00000550457 FBN2P35556 2912 aa2.01□□□□□ -2.09
CCNT1-203ENST00000550457 SONP18583 2426 aaKnown RBP2□□□□□ -2.09
CCNT1-203ENST00000550457 FAM208BQ5VWN6 2430 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms