RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 PSMB2P49721 201 aa12.87□□□□□ -0.35
BRF1-216ENST00000550208 SNCGO76070 127 aa12.85□□□□□ -0.35
BRF1-216ENST00000550208 M0R143 59 aa12.84□□□□□ -0.35
BRF1-216ENST00000550208 HRCT1Q6UXD1 115 aa12.84□□□□□ -0.35
BRF1-216ENST00000550208 A0A0G2JQZ4 141 aa12.83□□□□□ -0.36
BRF1-216ENST00000550208 CLEC2BQ92478 149 aa12.83□□□□□ -0.36
BRF1-216ENST00000550208 A0A1B0GX51 115 aa12.81□□□□□ -0.36
BRF1-216ENST00000550208 RPS29P62273 56 aaKnown RBP12.81□□□□□ -0.36
BRF1-216ENST00000550208 LRP2P98164 4655 aa12.81□□□□□ -0.36
BRF1-216ENST00000550208 COX6CP09669 75 aa12.8□□□□□ -0.36
BRF1-216ENST00000550208 PPDPFLQ8WWR9 84 aa12.8□□□□□ -0.36
BRF1-216ENST00000550208 F8WEM9 126 aa12.79□□□□□ -0.36
BRF1-216ENST00000550208 SNHG12Q9BXW3 62 aa12.79□□□□□ -0.36
BRF1-216ENST00000550208 LPAP08519 4548 aa12.79□□□□□ -0.36
BRF1-216ENST00000550208 OCIAD2Q56VL3 154 aa12.78□□□□□ -0.36
BRF1-216ENST00000550208 IGLV7-46A0A075B6I9 117 aa12.75□□□□□ -0.37
BRF1-216ENST00000550208 SCGB1C2P0DMR2 95 aa12.75□□□□□ -0.37
BRF1-216ENST00000550208 CD164Q04900 197 aa12.75□□□□□ -0.37
BRF1-216ENST00000550208 UBR4Q5T4S7 5183 aa12.75□□□□□ -0.37
BRF1-216ENST00000550208 IGLV8-61A0A075B6I0 122 aa12.74□□□□□ -0.37
BRF1-216ENST00000550208 BATFQ16520 125 aa12.74□□□□□ -0.37
BRF1-216ENST00000550208 FABP2P12104 132 aa12.7□□□□□ -0.38
BRF1-216ENST00000550208 Q6JHZ5 121 aa12.7□□□□□ -0.38
BRF1-216ENST00000550208 IGFL1Q6UW32 110 aa12.7□□□□□ -0.38
BRF1-216ENST00000550208 FP248Q71RG6 208 aaPredicted RBP12.7□□□□□ -0.38
BRF1-216ENST00000550208 H3BUT2 72 aa12.69□□□□□ -0.38
BRF1-216ENST00000550208 DNAL4O96015 105 aa12.69□□□□□ -0.38
BRF1-216ENST00000550208 NDUFV3P56181 108 aaKnown RBP12.69□□□□□ -0.38
BRF1-216ENST00000550208 NAA38Q9BRA0 125 aaKnown RBP12.69□□□□□ -0.38
BRF1-216ENST00000550208 GHRHP01286 108 aa12.68□□□□□ -0.38
BRF1-216ENST00000550208 LIMD2Q9BT23 127 aa12.68□□□□□ -0.38
BRF1-216ENST00000550208 ORMDL1Q9P0S3 153 aa12.66□□□□□ -0.38
BRF1-216ENST00000550208 LST1O00453 97 aa12.65□□□□□ -0.38
BRF1-216ENST00000550208 TRACP01848 142 aa12.64□□□□□ -0.39
BRF1-216ENST00000550208 TPRXLQ17RH7 258 aa12.62□□□□□ -0.39
BRF1-216ENST00000550208 Q5XG85 94 aa12.62□□□□□ -0.39
BRF1-216ENST00000550208 H3BMG7 143 aa12.61□□□□□ -0.39
BRF1-216ENST00000550208 H3BQ85 93 aa12.6□□□□□ -0.39
BRF1-216ENST00000550208 PCP4L1A6NKN8 68 aa12.59□□□□□ -0.39
BRF1-216ENST00000550208 TAX1BP3O14907 124 aa12.59□□□□□ -0.39
BRF1-216ENST00000550208 TMEM256-PLSCR3K7ERE1 68 aa12.58□□□□□ -0.4
BRF1-216ENST00000550208 TRBV7-7A0A0K0K1E9 115 aa12.57□□□□□ -0.4
BRF1-216ENST00000550208 TCL1BO95988 128 aa12.57□□□□□ -0.4
BRF1-216ENST00000550208 KRTAP13-3Q3SY46 172 aa12.56□□□□□ -0.4
BRF1-216ENST00000550208 CDIP1Q9H305 208 aa12.56□□□□□ -0.4
BRF1-216ENST00000550208 C1orf195Q5TG92 126 aa12.55□□□□□ -0.4
BRF1-216ENST00000550208 ATXN8Q156A1 80 aa12.54□□□□□ -0.4
BRF1-216ENST00000550208 A0A1B0GV72 72 aa12.53□□□□□ -0.4
BRF1-216ENST00000550208 C9orf118A6NHY6 69 aa12.53□□□□□ -0.4
BRF1-216ENST00000550208 BAALC-AS2P0C853 105 aa12.53□□□□□ -0.4
BRF1-216ENST00000550208 UBE2V1Q13404 147 aa12.53□□□□□ -0.4
BRF1-216ENST00000550208 Q6Q795 121 aa12.5□□□□□ -0.41
BRF1-216ENST00000550208 TEN1Q86WV5 123 aa12.5□□□□□ -0.41
BRF1-216ENST00000550208 ANKRD29Q8N6D5 301 aa12.49□□□□□ -0.41
BRF1-216ENST00000550208 RNF213Q63HN8 5207 aa12.48□□□□□ -0.41
BRF1-216ENST00000550208 A0A1W2PNM2 257 aa12.47□□□□□ -0.41
BRF1-216ENST00000550208 ASB16-AS1Q495Z4 193 aa12.47□□□□□ -0.41
BRF1-216ENST00000550208 LYRM7Q5U5X0 104 aa12.47□□□□□ -0.41
BRF1-216ENST00000550208 COL5A1-AS1Q5SY13 56 aa12.46□□□□□ -0.41
BRF1-216ENST00000550208 A0A1W2PPM0 123 aa12.45□□□□□ -0.42
BRF1-216ENST00000550208 TRBV20-1A0A075B6N2 111 aa12.44□□□□□ -0.42
BRF1-216ENST00000550208 A0A087WSZ3 146 aa12.41□□□□□ -0.42
BRF1-216ENST00000550208 RBM3P98179 157 aaKnown RBP12.4□□□□□ -0.42
BRF1-216ENST00000550208 C9orf92A6NGG3 77 aa12.39□□□□□ -0.43
BRF1-216ENST00000550208 C9JAW5 83 aa12.38□□□□□ -0.43
BRF1-216ENST00000550208 TRBV7-4A0A0J9YYF1 115 aa12.37□□□□□ -0.43
BRF1-216ENST00000550208 SS18L2Q9UHA2 77 aa12.37□□□□□ -0.43
BRF1-216ENST00000550208 CCKP06307 115 aa12.36□□□□□ -0.43
BRF1-216ENST00000550208 MUC17Q685J3 4493 aa12.36□□□□□ -0.43
BRF1-216ENST00000550208 XP32Q5T750 250 aa12.35□□□□□ -0.43
BRF1-216ENST00000550208 DSCR8Q96T75 97 aa12.34□□□□□ -0.43
BRF1-216ENST00000550208 VPS25Q9BRG1 176 aa12.31□□□□□ -0.44
BRF1-216ENST00000550208 SPCS1Q9Y6A9 102 aa12.31□□□□□ -0.44
BRF1-216ENST00000550208 JMJD7-PLA2G4BH0Y9G9 81 aa12.3□□□□□ -0.44
BRF1-216ENST00000550208 Q96NJ1 140 aa12.29□□□□□ -0.44
BRF1-216ENST00000550208 MTURNQ8N3F0 131 aa12.28□□□□□ -0.44
BRF1-216ENST00000550208 H3BT86 120 aa12.24□□□□□ -0.45
BRF1-216ENST00000550208 OBSCN-AS1Q96MR7 158 aa12.24□□□□□ -0.45
BRF1-216ENST00000550208 SEC61BP60468 96 aaKnown RBP12.23□□□□□ -0.45
BRF1-216ENST00000550208 Q6ZQT0 140 aa12.23□□□□□ -0.45
BRF1-216ENST00000550208 LOC110117498A0A087WWA1 95 aa12.22□□□□□ -0.45
BRF1-216ENST00000550208 K7EP34 96 aa12.22□□□□□ -0.45
BRF1-216ENST00000550208 C14orf132Q9NPU4 83 aa12.22□□□□□ -0.45
BRF1-216ENST00000550208 DEFB116Q30KQ4 102 aa12.19□□□□□ -0.46
BRF1-216ENST00000550208 LINC00472Q9H8W2 130 aa12.19□□□□□ -0.46
BRF1-216ENST00000550208 MUC2Q02817 5179 aa12.17□□□□□ -0.46
BRF1-216ENST00000550208 IGKV4-1P06312 121 aa12.17□□□□□ -0.46
BRF1-216ENST00000550208 PDE6GP18545 87 aa12.17□□□□□ -0.46
BRF1-216ENST00000550208 SMCPP49901 116 aaPredicted RBP12.17□□□□□ -0.46
BRF1-216ENST00000550208 PRO0461Q9UI25 63 aa12.16□□□□□ -0.46
BRF1-216ENST00000550208 SIGMAR1Q99720 223 aa12.14□□□□□ -0.47
BRF1-216ENST00000550208 KRTAP4-1Q9BYQ7 146 aa12.13□□□□□ -0.47
BRF1-216ENST00000550208 C21orf62-AS1Q17RA5 79 aa12.12□□□□□ -0.47
BRF1-216ENST00000550208 PCOTHQ58A44 107 aa12.12□□□□□ -0.47
BRF1-216ENST00000550208 RPL37P61927 97 aaKnown RBP12.11□□□□□ -0.47
BRF1-216ENST00000550208 GTF2H5Q6ZYL4 71 aa12.1□□□□□ -0.47
BRF1-216ENST00000550208 A0A1B0GW54 56 aa12.09□□□□□ -0.47
BRF1-216ENST00000550208 DSCR10P59022 87 aa12.08□□□□□ -0.48
BRF1-216ENST00000550208 LINC00313P59037 77 aa12.02□□□□□ -0.49
BRF1-216ENST00000550208 NOTCH2NLQ7Z3S9 236 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms