RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 NRAPQ86VF7 1730 aa-0.07□□□□□ -2.42
PRIM1-204ENST00000549549 SETD2Q9BYW2 2564 aaPredicted RBP-0.07□□□□□ -2.42
PRIM1-204ENST00000549549 RALGAPBQ86X10 1494 aa-0.08□□□□□ -2.42
PRIM1-204ENST00000549549 LINC00158P58513 81 aa-0.08□□□□□ -2.42
PRIM1-204ENST00000549549 ANKRD50Q9ULJ7 1429 aa-0.08□□□□□ -2.42
PRIM1-204ENST00000549549 PKHD1P08F94 4074 aa-0.08□□□□□ -2.42
PRIM1-204ENST00000549549 NHSQ6T4R5 1651 aa-0.08□□□□□ -2.42
PRIM1-204ENST00000549549 MACF1Q9UPN3 7388 aaKnown RBP-0.08□□□□□ -2.42
PRIM1-204ENST00000549549 RNF17Q9BXT8 1623 aaKnown RBP-0.09□□□□□ -2.42
PRIM1-204ENST00000549549 HECTD1Q9ULT8 2610 aa-0.09□□□□□ -2.42
PRIM1-204ENST00000549549 TJP1Q07157 1748 aa-0.09□□□□□ -2.42
PRIM1-204ENST00000549549 SPTBN4Q9H254 2564 aa-0.09□□□□□ -2.42
PRIM1-204ENST00000549549 H0YAA0 97 aa-0.09□□□□□ -2.42
PRIM1-204ENST00000549549 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
PRIM1-204ENST00000549549 C18orf32Q8TCD1 76 aa-0.09□□□□□ -2.42
PRIM1-204ENST00000549549 MAP1AP78559 2803 aaPredicted RBP-0.09□□□□□ -2.42
PRIM1-204ENST00000549549 CD163L1Q9NR16 1453 aa-0.1□□□□□ -2.42
PRIM1-204ENST00000549549 SVEP1Q4LDE5 3571 aa-0.1□□□□□ -2.42
PRIM1-204ENST00000549549 TNRC18O15417 2968 aaPredicted RBP-0.1□□□□□ -2.43
PRIM1-204ENST00000549549 ZC3H13Q5T200 1668 aaKnown RBP-0.1□□□□□ -2.43
PRIM1-204ENST00000549549 HTTP42858 3142 aa-0.1□□□□□ -2.43
PRIM1-204ENST00000549549 STAB2Q8WWQ8 2551 aa-0.1□□□□□ -2.43
PRIM1-204ENST00000549549 KIAA0586Q9BVV6 1533 aa-0.11□□□□□ -2.43
PRIM1-204ENST00000549549 UGGT2Q9NYU1 1516 aa-0.11□□□□□ -2.43
PRIM1-204ENST00000549549 H3BVH4 76 aa-0.11□□□□□ -2.43
PRIM1-204ENST00000549549 SPRR2AP35326 72 aa-0.11□□□□□ -2.43
PRIM1-204ENST00000549549 FLGP20930 4061 aaPredicted RBP-0.11□□□□□ -2.43
PRIM1-204ENST00000549549 PDZD2O15018 2839 aa-0.11□□□□□ -2.43
PRIM1-204ENST00000549549 CUBNO60494 3623 aa-0.12□□□□□ -2.43
PRIM1-204ENST00000549549 SRRM2Q9UQ35 2752 aaKnown RBP-0.12□□□□□ -2.43
PRIM1-204ENST00000549549 PRRC2CQ9Y520 2896 aaKnown RBP-0.12□□□□□ -2.43
PRIM1-204ENST00000549549 MRPL33O75394 65 aaKnown RBP-0.12□□□□□ -2.43
PRIM1-204ENST00000549549 IAPPP10997 89 aa-0.12□□□□□ -2.43
PRIM1-204ENST00000549549 UBL5Q9BZL1 73 aa-0.12□□□□□ -2.43
PRIM1-204ENST00000549549 CDC42BPGQ6DT37 1551 aa-0.12□□□□□ -2.43
PRIM1-204ENST00000549549 NBEAL1Q6ZS30 2694 aa-0.12□□□□□ -2.43
PRIM1-204ENST00000549549 ABCA9Q8IUA7 1624 aa-0.13□□□□□ -2.43
PRIM1-204ENST00000549549 BPTFQ12830 3046 aa-0.13□□□□□ -2.43
PRIM1-204ENST00000549549 INO80Q9ULG1 1556 aaPredicted RBP-0.13□□□□□ -2.43
PRIM1-204ENST00000549549 DEFB131BA0A096LNP1 70 aa-0.13□□□□□ -2.43
PRIM1-204ENST00000549549 HMGA1P17096 107 aaKnown RBP-0.13□□□□□ -2.43
PRIM1-204ENST00000549549 KRTAP6-2Q3LI66 62 aa-0.13□□□□□ -2.43
PRIM1-204ENST00000549549 ZZEF1O43149 2961 aa-0.13□□□□□ -2.43
PRIM1-204ENST00000549549 ANKRD36CQ5JPF3 1778 aa-0.14□□□□□ -2.43
PRIM1-204ENST00000549549 C3P01024 1663 aa-0.14□□□□□ -2.43
PRIM1-204ENST00000549549 PKD1P98161 4303 aa-0.14□□□□□ -2.43
PRIM1-204ENST00000549549 KCNQ1DNQ9H478 68 aa-0.14□□□□□ -2.43
PRIM1-204ENST00000549549 SPG11Q96JI7 2443 aa-0.14□□□□□ -2.43
PRIM1-204ENST00000549549 LYSTQ99698 3801 aa-0.14□□□□□ -2.43
PRIM1-204ENST00000549549 AKAP9Q99996 3911 aa-0.15□□□□□ -2.43
PRIM1-204ENST00000549549 MROH1Q8NDA8 1641 aa-0.15□□□□□ -2.43
PRIM1-204ENST00000549549 LYNX1G3V0Z9 82 aa-0.15□□□□□ -2.43
PRIM1-204ENST00000549549 H3BNG1 76 aa-0.15□□□□□ -2.43
PRIM1-204ENST00000549549 ENHOQ6UWT2 76 aa-0.15□□□□□ -2.43
PRIM1-204ENST00000549549 FAT3Q8TDW7 4589 aa-0.15□□□□□ -2.43
PRIM1-204ENST00000549549 DSPP15924 2871 aaKnown RBP-0.15□□□□□ -2.43
PRIM1-204ENST00000549549 ITSN2Q9NZM3 1697 aa-0.15□□□□□ -2.43
PRIM1-204ENST00000549549 EPG5Q9HCE0 2579 aa-0.15□□□□□ -2.43
PRIM1-204ENST00000549549 CEP290O15078 2479 aa-0.15□□□□□ -2.43
PRIM1-204ENST00000549549 DEFB130BP0DP73 79 aa-0.16□□□□□ -2.44
PRIM1-204ENST00000549549 DEFB130AP0DP74 79 aa-0.16□□□□□ -2.44
PRIM1-204ENST00000549549 KRTAP19-7Q3SYF9 63 aa-0.16□□□□□ -2.44
PRIM1-204ENST00000549549 DEFB106AQ8N104 65 aa-0.16□□□□□ -2.44
PRIM1-204ENST00000549549 DIP2AQ14689 1571 aa-0.16□□□□□ -2.44
PRIM1-204ENST00000549549 DNAH9Q9NYC9 4486 aa-0.16□□□□□ -2.44
PRIM1-204ENST00000549549 NF1P21359 2839 aa-0.16□□□□□ -2.44
PRIM1-204ENST00000549549 DSTQ03001 7570 aaKnown RBP-0.17□□□□□ -2.44
PRIM1-204ENST00000549549 DUOX2Q9NRD8 1548 aa-0.17□□□□□ -2.44
PRIM1-204ENST00000549549 SONP18583 2426 aaKnown RBP-0.17□□□□□ -2.44
PRIM1-204ENST00000549549 TGP01266 2768 aa-0.17□□□□□ -2.44
PRIM1-204ENST00000549549 SPRR2EP22531 72 aa-0.17□□□□□ -2.44
PRIM1-204ENST00000549549 ATXN8Q156A1 80 aa-0.17□□□□□ -2.44
PRIM1-204ENST00000549549 HILPDAQ9Y5L2 63 aa-0.17□□□□□ -2.44
PRIM1-204ENST00000549549 VPS13DQ5THJ4 4388 aa-0.17□□□□□ -2.44
PRIM1-204ENST00000549549 KIF1AQ12756 1690 aa-0.18□□□□□ -2.44
PRIM1-204ENST00000549549 ASXL1Q8IXJ9 1541 aa-0.18□□□□□ -2.44
PRIM1-204ENST00000549549 MUC2Q02817 5179 aa-0.18□□□□□ -2.44
PRIM1-204ENST00000549549 VPS13BQ7Z7G8 4022 aa-0.18□□□□□ -2.44
PRIM1-204ENST00000549549 PRLHP81277 87 aa-0.18□□□□□ -2.44
PRIM1-204ENST00000549549 SMCO4Q9NRQ5 59 aa-0.18□□□□□ -2.44
PRIM1-204ENST00000549549 GNG13Q9P2W3 67 aa-0.18□□□□□ -2.44
PRIM1-204ENST00000549549 DNAH6Q9C0G6 4158 aa-0.19□□□□□ -2.44
PRIM1-204ENST00000549549 ETDCA0A1B0GVM5 59 aa-0.19□□□□□ -2.44
PRIM1-204ENST00000549549 C9orf92A6NGG3 77 aa-0.19□□□□□ -2.44
PRIM1-204ENST00000549549 ANK3Q12955 4377 aaKnown RBP-0.2□□□□□ -2.44
PRIM1-204ENST00000549549 GCN1Q92616 2671 aaKnown RBP-0.2□□□□□ -2.44
PRIM1-204ENST00000549549 MADDQ8WXG6 1647 aa-0.2□□□□□ -2.44
PRIM1-204ENST00000549549 MXRA5Q9NR99 2828 aa-0.2□□□□□ -2.44
PRIM1-204ENST00000549549 TEP1Q99973 2627 aaKnown RBP-0.2□□□□□ -2.44
PRIM1-204ENST00000549549 CCDC180Q9P1Z9 1646 aa-0.2□□□□□ -2.44
PRIM1-204ENST00000549549 KMT2CQ8NEZ4 4911 aaKnown RBP-0.2□□□□□ -2.44
PRIM1-204ENST00000549549 RANBP2P49792 3224 aaKnown RBP-0.21□□□□□ -2.44
PRIM1-204ENST00000549549 DMXL1Q9Y485 3027 aa-0.21□□□□□ -2.44
PRIM1-204ENST00000549549 MTORP42345 2549 aa-0.21□□□□□ -2.44
PRIM1-204ENST00000549549 DNAH3Q8TD57 4116 aa-0.21□□□□□ -2.44
PRIM1-204ENST00000549549 ABCC6O95255 1503 aa-0.21□□□□□ -2.44
PRIM1-204ENST00000549549 PDCD5O14737 125 aa-0.21□□□□□ -2.44
PRIM1-204ENST00000549549 MINOS1Q5TGZ0 78 aa-0.21□□□□□ -2.44
PRIM1-204ENST00000549549 S4R3F8 94 aa-0.21□□□□□ -2.44
PRIM1-204ENST00000549549 PKD1L2Q7Z442 2459 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms