RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 UBE2AP49459 152 aa6.18□□□□□ -1.42
SMARCD1-205ENST00000548573 WFDC13Q8IUB5 93 aa6.18□□□□□ -1.42
SMARCD1-205ENST00000548573 DNAH3Q8TD57 4116 aa6.16□□□□□ -1.42
SMARCD1-205ENST00000548573 TRAV22A0A0B4J277 110 aa6.16□□□□□ -1.42
SMARCD1-205ENST00000548573 CMYA5Q8N3K9 4069 aa6.16□□□□□ -1.42
SMARCD1-205ENST00000548573 H3BPC8 53 aa6.16□□□□□ -1.42
SMARCD1-205ENST00000548573 BAHCC1Q9P281 2608 aa6.15□□□□□ -1.42
SMARCD1-205ENST00000548573 LRCOL1A6NCL2 159 aa6.14□□□□□ -1.43
SMARCD1-205ENST00000548573 RPL37AP61513 92 aaKnown RBP6.14□□□□□ -1.43
SMARCD1-205ENST00000548573 PRR15Q8IV56 129 aa6.14□□□□□ -1.43
SMARCD1-205ENST00000548573 KRTAP1-5Q9BYS1 174 aa6.14□□□□□ -1.43
SMARCD1-205ENST00000548573 A8MWP4 228 aa6.14□□□□□ -1.43
SMARCD1-205ENST00000548573 CASC2Q6XLA1 102 aa6.14□□□□□ -1.43
SMARCD1-205ENST00000548573 SPANXA2-OT1Q8N9U9 137 aa6.14□□□□□ -1.43
SMARCD1-205ENST00000548573 LINC00208Q96KT6 92 aa6.14□□□□□ -1.43
SMARCD1-205ENST00000548573 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
SMARCD1-205ENST00000548573 C14orf177Q52M58 125 aa6.13□□□□□ -1.43
SMARCD1-205ENST00000548573 LINC00472Q9H8W2 130 aa6.13□□□□□ -1.43
SMARCD1-205ENST00000548573 PRR4Q16378 134 aa6.13□□□□□ -1.43
SMARCD1-205ENST00000548573 H0Y9P7 68 aa6.12□□□□□ -1.43
SMARCD1-205ENST00000548573 PHF5AQ7RTV0 110 aaKnown RBP6.12□□□□□ -1.43
SMARCD1-205ENST00000548573 HUWE1Q7Z6Z7 4374 aaKnown RBP6.12□□□□□ -1.43
SMARCD1-205ENST00000548573 K7EIL1 84 aa6.11□□□□□ -1.43
SMARCD1-205ENST00000548573 PRB2P02812 416 aaPredicted RBP6.11□□□□□ -1.43
SMARCD1-205ENST00000548573 KRTAP11-1Q8IUC1 163 aa6.11□□□□□ -1.43
SMARCD1-205ENST00000548573 B9D2Q9BPU9 175 aa6.11□□□□□ -1.43
SMARCD1-205ENST00000548573 V9GYY9 64 aa6.11□□□□□ -1.43
SMARCD1-205ENST00000548573 CHTF8P0CG12 524 aa6.1□□□□□ -1.43
SMARCD1-205ENST00000548573 C1orf195Q5TG92 126 aa6.1□□□□□ -1.43
SMARCD1-205ENST00000548573 FLNBO75369 2602 aaKnown RBP6.09□□□□□ -1.43
SMARCD1-205ENST00000548573 C9orf163Q8N9P6 203 aa6.08□□□□□ -1.44
SMARCD1-205ENST00000548573 DNAH10Q8IVF4 4471 aa6.08□□□□□ -1.44
SMARCD1-205ENST00000548573 PSPHP1O15172 72 aa6.07□□□□□ -1.44
SMARCD1-205ENST00000548573 UBE2DNLQ8IWF7 75 aa6.07□□□□□ -1.44
SMARCD1-205ENST00000548573 MAST4O15021 2626 aa6.07□□□□□ -1.44
SMARCD1-205ENST00000548573 FBN1P35555 2871 aaKnown RBP6.07□□□□□ -1.44
SMARCD1-205ENST00000548573 DNAH9Q9NYC9 4486 aa6.07□□□□□ -1.44
SMARCD1-205ENST00000548573 MMP24-AS1A0A0U1RRL7 71 aa6.06□□□□□ -1.44
SMARCD1-205ENST00000548573 KRTAP13-1Q8IUC0 172 aa6.06□□□□□ -1.44
SMARCD1-205ENST00000548573 APLNQ9ULZ1 77 aa6.06□□□□□ -1.44
SMARCD1-205ENST00000548573 F8P00451 2351 aa6.06□□□□□ -1.44
SMARCD1-205ENST00000548573 A8MUN3 132 aa6.03□□□□□ -1.44
SMARCD1-205ENST00000548573 ASB16-AS1Q495Z4 193 aa6.03□□□□□ -1.44
SMARCD1-205ENST00000548573 LIMD2Q9BT23 127 aa6.03□□□□□ -1.44
SMARCD1-205ENST00000548573 STAB1Q9NY15 2570 aa6.02□□□□□ -1.45
SMARCD1-205ENST00000548573 Q8N9P0 234 aaPredicted RBP6.02□□□□□ -1.45
SMARCD1-205ENST00000548573 TP53AIP1Q9HCN2 124 aa6.02□□□□□ -1.45
SMARCD1-205ENST00000548573 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
SMARCD1-205ENST00000548573 MOBPQ13875 183 aa6.02□□□□□ -1.45
SMARCD1-205ENST00000548573 Q5VV11 94 aa6.02□□□□□ -1.45
SMARCD1-205ENST00000548573 Q96NJ1 140 aa6.02□□□□□ -1.45
SMARCD1-205ENST00000548573 PANO1I0J062 215 aa6□□□□□ -1.45
SMARCD1-205ENST00000548573 LINC00483Q53H64 154 aa6□□□□□ -1.45
SMARCD1-205ENST00000548573 KRTAP3-3Q9BYR6 98 aa5.99□□□□□ -1.45
SMARCD1-205ENST00000548573 KRTAP3-2Q9BYR7 98 aa5.99□□□□□ -1.45
SMARCD1-205ENST00000548573 NOTCH1P46531 2555 aa5.99□□□□□ -1.45
SMARCD1-205ENST00000548573 NBDYA0A0U1RRE5 68 aa5.98□□□□□ -1.45
SMARCD1-205ENST00000548573 Q6ZR54 194 aa5.98□□□□□ -1.45
SMARCD1-205ENST00000548573 Q6ZRN7 208 aaPredicted RBP5.98□□□□□ -1.45
SMARCD1-205ENST00000548573 SPACA4Q8TDM5 124 aa5.98□□□□□ -1.45
SMARCD1-205ENST00000548573 C8orf17Q9NRJ1 99 aa5.98□□□□□ -1.45
SMARCD1-205ENST00000548573 LYSTQ99698 3801 aa5.97□□□□□ -1.45
SMARCD1-205ENST00000548573 IGLV9-49A0A0B4J1Y8 123 aa5.97□□□□□ -1.45
SMARCD1-205ENST00000548573 COA5Q86WW8 74 aa5.97□□□□□ -1.45
SMARCD1-205ENST00000548573 ZNF706Q9Y5V0 76 aaPredicted RBP5.96□□□□□ -1.46
SMARCD1-205ENST00000548573 DYNC2H1Q8NCM8 4307 aaKnown RBP5.96□□□□□ -1.46
SMARCD1-205ENST00000548573 PMAIP1Q13794 54 aa5.95□□□□□ -1.46
SMARCD1-205ENST00000548573 SRRM2Q9UQ35 2752 aaKnown RBP5.95□□□□□ -1.46
SMARCD1-205ENST00000548573 NBEAL1Q6ZS30 2694 aa5.95□□□□□ -1.46
SMARCD1-205ENST00000548573 LOC101927531A0A1B0GV80 90 aa5.95□□□□□ -1.46
SMARCD1-205ENST00000548573 A0A1B0GVX0 72 aa5.95□□□□□ -1.46
SMARCD1-205ENST00000548573 CHKB-CPT1BH3BT56 60 aa5.95□□□□□ -1.46
SMARCD1-205ENST00000548573 PRR15LQ9BU68 103 aa5.95□□□□□ -1.46
SMARCD1-205ENST00000548573 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.95□□□□□ -1.46
SMARCD1-205ENST00000548573 CD164Q04900 197 aa5.94□□□□□ -1.46
SMARCD1-205ENST00000548573 PCOTHQ58A44 107 aa5.94□□□□□ -1.46
SMARCD1-205ENST00000548573 Q75L30 129 aa5.94□□□□□ -1.46
SMARCD1-205ENST00000548573 WWC2-AS2Q96NR7 200 aa5.94□□□□□ -1.46
SMARCD1-205ENST00000548573 MDFIQ99750 246 aa5.93□□□□□ -1.46
SMARCD1-205ENST00000548573 IGHV6-1A0A0B4J1U7 121 aa5.92□□□□□ -1.46
SMARCD1-205ENST00000548573 CDK2AP2O75956 126 aa5.92□□□□□ -1.46
SMARCD1-205ENST00000548573 MRPL34Q9BQ48 92 aaKnown RBP5.92□□□□□ -1.46
SMARCD1-205ENST00000548573 NUPR2A6NF83 97 aa5.92□□□□□ -1.46
SMARCD1-205ENST00000548573 TENM2Q9NT68 2774 aa5.91□□□□□ -1.46
SMARCD1-205ENST00000548573 NDUFS5O43920 106 aa5.9□□□□□ -1.46
SMARCD1-205ENST00000548573 IGLV5-52A0A0A0MRZ9 124 aa5.9□□□□□ -1.47
SMARCD1-205ENST00000548573 A8MU10 97 aa5.9□□□□□ -1.47
SMARCD1-205ENST00000548573 A0A087WTM6 91 aa5.89□□□□□ -1.47
SMARCD1-205ENST00000548573 PSORS1C2Q9UIG4 136 aa5.89□□□□□ -1.47
SMARCD1-205ENST00000548573 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
SMARCD1-205ENST00000548573 COL6A5A8TX70 2615 aa5.89□□□□□ -1.47
SMARCD1-205ENST00000548573 ZNF861PO60384 105 aa5.89□□□□□ -1.47
SMARCD1-205ENST00000548573 PLAC8Q9NZF1 115 aa5.89□□□□□ -1.47
SMARCD1-205ENST00000548573 COL7A1Q02388 2944 aa5.88□□□□□ -1.47
SMARCD1-205ENST00000548573 PLECQ15149 4684 aaKnown RBP5.88□□□□□ -1.47
SMARCD1-205ENST00000548573 DNAH7Q8WXX0 4024 aa5.88□□□□□ -1.47
SMARCD1-205ENST00000548573 SEC61GP60059 68 aa5.87□□□□□ -1.47
SMARCD1-205ENST00000548573 CSMD3Q7Z407 3707 aa5.87□□□□□ -1.47
SMARCD1-205ENST00000548573 STAB2Q8WWQ8 2551 aa5.87□□□□□ -1.47
SMARCD1-205ENST00000548573 A6NED7 52 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms